; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0100911 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0100911
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
Genome locationCMiso1.1chr04:17082143..17082889
RNA-Seq ExpressionCmc04g0100911
SyntenyCmc04g0100911
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034956.1 F5J5.1 [Cucumis melo var. makuwa]1.8e-7665.2Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H KITKD N   ID+KLY S+I SLL LT SRPDIA+ VG+C +FQ DPR SHL  VKRIIKY+H T+DFG+LYSYDT S L+GYCDA+W G ++DR+ST
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV
          G                          + SGCTQL+WMK +LHEYGI QD MTLYCDNMSAIDI K PVQHS+TKHIDIRHHFIRELIE KII L+HV
Subjt:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV

Query:  RSSFQLADIFTKPLDISLFEHLRAGLG
        RS  QLADIFTKPLD + FEHLRAGLG
Subjt:  RSSFQLADIFTKPLDISLFEHLRAGLG

KAA0042297.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.1e-7665.05Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H K+TKD+ G  +D+KLY S++GS+L LT +RPDIA+ +G+C R+Q DPR++HL  VKRI+KY+H TSDFG++YSYDT  T++GYCDA+WAG ++D K+ 
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA
             + SGCTQL+WMK +L EYG  QDTMTLYCDNMSAIDI KN VQHSRTKHIDIRHHFIREL+E K+I  +H+RS+ QL DIFTKPLD S FE+L  
Subjt:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA

Query:  GLGVCR
        GLGVCR
Subjt:  GLGVCR

KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.8e-7661.54Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H K+TKD+  +  D+KLY S++GSLL LT SRP+IA+VVG+C  +Q DPR++HL  VKRI+KY+H TSDFG++YSYDT   L+GYCDA+WAG ++DRKST
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LGG------------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIV
         GG                              + SGCTQL+WMK +LHEYG  QDTMTLYCDN SAIDI KNPVQHSRTKHIDIRHHFIREL+E K+I 
Subjt:  LGG------------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIV

Query:  LEHVRSSFQLADIFTKPLDISLFEHLRAGLGVCR
        L+H+RS+ QL DIFTKPLD S FE+LRAGLGVCR
Subjt:  LEHVRSSFQLADIFTKPLDISLFEHLRAGLGVCR

TYJ97126.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.7e-7665.53Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H K+TKD+ G  +D+KLY S+ GSLL LT SRPDIA+ +G+  R+Q +PR++HL  VKRI+KY+H TSDFG++YSYDT  T++GYCDA+WAG ++D K+ 
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA
             + SGCTQL+WM+ +L EYG  QDTMTLYCDNMSAIDI KNPVQHSRTKHIDIRHHF+REL+E K+I  +H+RS+ QLADIFTKPLD S FE+L A
Subjt:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA

Query:  GLGVCR
        GLGVCR
Subjt:  GLGVCR

TYK21311.1 F5J5.1 [Cucumis melo var. makuwa]6.1e-7765.35Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H KITKD N   ID+KLY S+I SLL LT SRPDIA+ VG+C +FQ DPR SHL  VKRIIKY+H T+DFG+LYSYDT S L+GYCDA+W G ++DR+ST
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV
          G                          + SGCTQL+WMK +LHEYGI QD MTLYCDNMSAIDI K PVQHS+TKHIDIRHHFIRELIE KII L+HV
Subjt:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV

Query:  RSSFQLADIFTKPLDISLFEHLRAGLGV
        RS  QLADIFTKPLD + FEHLRAGLGV
Subjt:  RSSFQLADIFTKPLDISLFEHLRAGLGV

TrEMBL top hitse value%identityAlignment
A0A5A7SYI8 F5J5.18.6e-7765.2Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H KITKD N   ID+KLY S+I SLL LT SRPDIA+ VG+C +FQ DPR SHL  VKRIIKY+H T+DFG+LYSYDT S L+GYCDA+W G ++DR+ST
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV
          G                          + SGCTQL+WMK +LHEYGI QD MTLYCDNMSAIDI K PVQHS+TKHIDIRHHFIRELIE KII L+HV
Subjt:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV

Query:  RSSFQLADIFTKPLDISLFEHLRAGLG
        RS  QLADIFTKPLD + FEHLRAGLG
Subjt:  RSSFQLADIFTKPLDISLFEHLRAGLG

A0A5A7TKS7 Gag-pol polyprotein2.5e-7665.05Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H K+TKD+ G  +D+KLY S++GS+L LT +RPDIA+ +G+C R+Q DPR++HL  VKRI+KY+H TSDFG++YSYDT  T++GYCDA+WAG ++D K+ 
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA
             + SGCTQL+WMK +L EYG  QDTMTLYCDNMSAIDI KN VQHSRTKHIDIRHHFIREL+E K+I  +H+RS+ QL DIFTKPLD S FE+L  
Subjt:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA

Query:  GLGVCR
        GLGVCR
Subjt:  GLGVCR

A0A5D3BDQ5 Gag-pol polyprotein3.3e-7665.53Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H K+TKD+ G  +D+KLY S+ GSLL LT SRPDIA+ +G+  R+Q +PR++HL  VKRI+KY+H TSDFG++YSYDT  T++GYCDA+WAG ++D K+ 
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA
             + SGCTQL+WM+ +L EYG  QDTMTLYCDNMSAIDI KNPVQHSRTKHIDIRHHF+REL+E K+I  +H+RS+ QLADIFTKPLD S FE+L A
Subjt:  LG--GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRA

Query:  GLGVCR
        GLGVCR
Subjt:  GLGVCR

A0A5D3DCC3 F5J5.12.9e-7765.35Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H KITKD N   ID+KLY S+I SLL LT SRPDIA+ VG+C +FQ DPR SHL  VKRIIKY+H T+DFG+LYSYDT S L+GYCDA+W G ++DR+ST
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV
          G                          + SGCTQL+WMK +LHEYGI QD MTLYCDNMSAIDI K PVQHS+TKHIDIRHHFIRELIE KII L+HV
Subjt:  LGG--------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHV

Query:  RSSFQLADIFTKPLDISLFEHLRAGLGV
        RS  QLADIFTKPLD + FEHLRAGLGV
Subjt:  RSSFQLADIFTKPLDISLFEHLRAGLGV

A0A5D3DLL1 Gag-pol polyprotein8.6e-7761.54Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        H K+TKD+  +  D+KLY S++GSLL LT SRP+IA+VVG+C  +Q DPR++HL  VKRI+KY+H TSDFG++YSYDT   L+GYCDA+WAG ++DRKST
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LGG------------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIV
         GG                              + SGCTQL+WMK +LHEYG  QDTMTLYCDN SAIDI KNPVQHSRTKHIDIRHHFIREL+E K+I 
Subjt:  LGG------------------------------SESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIV

Query:  LEHVRSSFQLADIFTKPLDISLFEHLRAGLGVCR
        L+H+RS+ QL DIFTKPLD S FE+LRAGLGVCR
Subjt:  LEHVRSSFQLADIFTKPLDISLFEHLRAGLGVCR

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-2331.65Show/hide
Query:  SMIGSLLCLTV-SRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDT--NSTLIGYCDANWAGCSEDRKSTLG--------------
        S+IG L+ + + +RPD+   V +  R+           +KR+++Y+  T D  +++  +    + +IGY D++WAG   DRKST G              
Subjt:  SMIGSLLCLTV-SRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDT--NSTLIGYCDANWAGCSEDRKSTLG--------------

Query:  ----------GSES-------GCTQLMWMKQILHEYGIK-QDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIF
                   +E+          + +W+K +L    IK ++ + +Y DN   I I  NP  H R KHIDI++HF RE ++  +I LE++ +  QLADIF
Subjt:  ----------GSES-------GCTQLMWMKQILHEYGIK-QDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIF

Query:  TKPLDISLFEHLRAGLGV
        TKPL  + F  LR  LG+
Subjt:  TKPLDISLFEHLRAGLGV

P0CV72 Secreted RxLR effector protein 1613.2e-1239.33Show/hide
Query:  NKLYISMIGSLLCL-TVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG
        N  Y+S +G+++ L  V+RPD+A  VGV  +F  DP  +H   +KR+++Y+  T  +G+ ++    + L+GY DA+WAG  E R+ST G
Subjt:  NKLYISMIGSLLCL-TVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-2530.49Show/hide
Query:  SLGLINHSKITKDSNGEPIDNK------LYISMIGSLL-CLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCD
        S  L  H K++K      ++ K       Y S +GSL+  +  +RPDIA  VGV  RF  +P   H   VK I++Y+  T+   + +   ++  L GY D
Subjt:  SLGLINHSKITKDSNGEPIDNK------LYISMIGSLL-CLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCD

Query:  ANWAGCSEDRKSTLG-------------------------------GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIR
        A+ AG  ++RKS+ G                                +E+G  +++W+K+ L E G+ Q    +YCD+ SAID+ KN + H+RTKHID+R
Subjt:  ANWAGCSEDRKSTLG-------------------------------GSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIR

Query:  HHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRAGLGV
        +H+IRE+++ + + +  + ++   AD+ TK +  + FE  +  +G+
Subjt:  HHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRAGLGV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.5e-2530.77Show/hide
Query:  KITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG
        K++  S  +  D   Y  ++GSL  L  +RPDI++ V    +F   P   HL  +KRI++Y+  T + G+        +L  Y DA+WAG  +D  ST G
Subjt:  KITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG

Query:  ------------------------------GSESGCTQLMWMKQILHEYGIK-QDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVL
                                         +  +++ W+  +L E GI+      +YCDN+ A  +  NPV HSR KHI I +HFIR  ++   + +
Subjt:  ------------------------------GSESGCTQLMWMKQILHEYGIK-QDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVL

Query:  EHVRSSFQLADIFTKPLDISLFEHLRAGLGVCRI
         HV +  QLAD  TKPL  + F++  + +GV R+
Subjt:  EHVRSSFQLADIFTKPLDISLFEHLRAGLGVCRI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.8e-2429.49Show/hide
Query:  KITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG
        K+T  S  +  D   Y  ++GSL  L  +RPD+++ V    ++   P   H   +KR+++Y+  T D G+        +L  Y DA+WAG ++D  ST G
Subjt:  KITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG

Query:  ------------------------------GSESGCTQLMWMKQILHEYGIK-QDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVL
                                         +  ++L W+  +L E GI+      +YCDN+ A  +  NPV HSR KHI + +HFIR  ++   + +
Subjt:  ------------------------------GSESGCTQLMWMKQILHEYGIK-QDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVL

Query:  EHVRSSFQLADIFTKPLDISLFEHLRAGLGVCRI
         HV +  QLAD  TKPL    F++    +GV ++
Subjt:  EHVRSSFQLADIFTKPLDISLFEHLRAGLGVCRI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.5e-1730.65Show/hide
Query:  SNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG-----
        S G+ +D K Y  +IG L+ L ++R DI+F V    +F   PR++H   V +I+ YI  T   G+ YS      L  + DA++  C + R+ST G     
Subjt:  SNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG-----

Query:  -------------------------GSESGCTQLMWMKQILHEYGIKQDTMT-LYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRE
                                        ++MW+ Q   E  +     T L+CDN +AI I  N V H RTKHI+   H +RE
Subjt:  -------------------------GSESGCTQLMWMKQILHEYGIKQDTMT-LYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.1e-0730.67Show/hide
Query:  LTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG
        LT++RPD+ F V    +F    R + +  V +++ Y+  T   G+ YS  ++  L  + D++WA C + R+S  G
Subjt:  LTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKSTLG

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-1128.07Show/hide
Query:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST
        +S ++     +P D   + S++G+L  LT++RPDI++ V +  +   +P ++   ++KR+++Y+  T   G+    ++   +  +CD++WAGC+  R+ST
Subjt:  HSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDRKST

Query:  LG-GSESGCTQLMW
         G  +  GC  + W
Subjt:  LG-GSESGCTQLMW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGAATATTGTTAAAAAGTTTGGGCTTGATAAATCACAGCAAAATTACCAAAGATAGTAATGGAGAGCCTATTGATAATAAACTTTACATAAGTATGATTGGTAG
TTTACTTTGTTTAACAGTCAGTAGACCTGACATTGCCTTTGTTGTAGGAGTATGTGTTAGATTTCAATTTGATCCCCGAGTTTCTCACCTTCCTGTTGTCAAGAGAATTA
TCAAATATATTCATTGCACTAGTGACTTTGGAGTGTTATATTCATATGATACAAATTCCACTTTAATTGGTTATTGTGATGCAAATTGGGCAGGATGTTCAGAGGATAGG
AAAAGTACTTTAGGAGGATCTGAAAGTGGTTGTACTCAACTGATGTGGATGAAGCAAATACTTCATGAATATGGTATTAAACAGGATACCATGACTCTCTATTGTGATAA
TATGAGTGCTATTGATATTTTTAAAAATCCAGTTCAACATAGTAGAACCAAACACATTGATATTAGACATCATTTTATCAGAGAACTTATTGAAGGAAAAATTATCGTAC
TTGAGCATGTTCGATCCTCTTTTCAGCTAGCTGATATTTTTACTAAACCACTTGATATTTCTTTATTTGAACATTTAAGAGCTGGTTTAGGGGTGTGTAGGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGAATATTGTTAAAAAGTTTGGGCTTGATAAATCACAGCAAAATTACCAAAGATAGTAATGGAGAGCCTATTGATAATAAACTTTACATAAGTATGATTGGTAG
TTTACTTTGTTTAACAGTCAGTAGACCTGACATTGCCTTTGTTGTAGGAGTATGTGTTAGATTTCAATTTGATCCCCGAGTTTCTCACCTTCCTGTTGTCAAGAGAATTA
TCAAATATATTCATTGCACTAGTGACTTTGGAGTGTTATATTCATATGATACAAATTCCACTTTAATTGGTTATTGTGATGCAAATTGGGCAGGATGTTCAGAGGATAGG
AAAAGTACTTTAGGAGGATCTGAAAGTGGTTGTACTCAACTGATGTGGATGAAGCAAATACTTCATGAATATGGTATTAAACAGGATACCATGACTCTCTATTGTGATAA
TATGAGTGCTATTGATATTTTTAAAAATCCAGTTCAACATAGTAGAACCAAACACATTGATATTAGACATCATTTTATCAGAGAACTTATTGAAGGAAAAATTATCGTAC
TTGAGCATGTTCGATCCTCTTTTCAGCTAGCTGATATTTTTACTAAACCACTTGATATTTCTTTATTTGAACATTTAAGAGCTGGTTTAGGGGTGTGTAGGATTTAA
Protein sequenceShow/hide protein sequence
MQRILLKSLGLINHSKITKDSNGEPIDNKLYISMIGSLLCLTVSRPDIAFVVGVCVRFQFDPRVSHLPVVKRIIKYIHCTSDFGVLYSYDTNSTLIGYCDANWAGCSEDR
KSTLGGSESGCTQLMWMKQILHEYGIKQDTMTLYCDNMSAIDIFKNPVQHSRTKHIDIRHHFIRELIEGKIIVLEHVRSSFQLADIFTKPLDISLFEHLRAGLGVCRI