; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0101071 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0101071
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr04:17282336..17283610
RNA-Seq ExpressionCmc04g0101071
SyntenyCmc04g0101071
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0015074 - DNA integration (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0042162 - telomeric DNA binding (molecular function)
GO:0043531 - ADP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025181.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

KAA0035947.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

TYJ95793.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

TYK12368.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

TYK21117.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

TrEMBL top hitse value%identityAlignment
A0A5A7T2Z4 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

A0A5D3BL45 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

A0A5D3DBU0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

A0A5D3DMJ1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

A0A5D3E2V7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-22994.34Show/hide
Query:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD
        MKFK FDSS+EEEDDRQNEIVDDASVRGT+LLSDIYERCNVA CEPANYAEAKKDQRW+ AM+EELSMIEKNKTWILVDRPQDRKVIGV+WVFRTKLN D
Subjt:  MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVD

Query:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR
        G INKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF I AQKGWKLYQLDVKSAFLNGVLQEEIYVEQ EGCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQ FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIG LMYLTATRPDILN VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLI 
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIS

Query:  LSDSDWGGSIDDMRGTLGYCMFYS
         SDSDWGGSIDDMR TLGYC   S
Subjt:  LSDSDWGGSIDDMRGTLGYCMFYS

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.0e-6636.52Show/hide
Query:  SVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKA
        S  EED+  N++V +A      + +D+         +   Y + K    W  A+  EL+  + N TW +  RP+++ ++  RWVF  K N  G   ++KA
Subjt:  SVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKA

Query:  RLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDE
        RLV +G+ Q + +DY +TFAPVAR+ + R + ++  Q   K++Q+DVK+AFLNG L+EEIY+   +G     +   V  L KA+YGLKQA R W+   ++
Subjt:  RLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDE

Query:  HLLSLGFLKSLSESTLYV--KHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDE
         L    F+ S  +  +Y+  K N    + V LYVDD+++   +   +  FK  +M+ F MTDL  + +F+GI I+  + ++++ Q  Y K+IL KF M+ 
Subjt:  HLLSLGFLKSLSESTLYV--KHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDE

Query:  CKAVSTPMNQK---EKLCKEDGADKVDEGYFRSLIGYLMY-LTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEF--KLIS
        C AVSTP+  K   E L  ++  +       RSLIG LMY +  TRPD+   V+ILSR+    +    +  KRV+RY+KGT D  + F +   F  K+I 
Subjt:  CKAVSTPMNQK---EKLCKEDGADKVDEGYFRSLIGYLMY-LTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEF--KLIS

Query:  LSDSDWGGSIDDMRGTLGY
          DSDW GS  D + T GY
Subjt:  LSDSDWGGSIDDMRGTLGY

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-6638.24Show/hide
Query:  AMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFL
        AM+EE+  ++KN T+ LV+ P+ ++ +  +WVF+ K + D  + ++KARLVVKG+ Q  G+D+ + F+PV +M +IR + ++ A    ++ QLDVK+AFL
Subjt:  AMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFL

Query:  NGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKH-NGTSILIVSLYVDDLLVTGNNADHIQKFKWE
        +G L+EEIY+EQ EG E  G+ + V  L K+LYGLKQAPR WY K D  + S  +LK+ S+  +Y K  +  + +I+ LYVDD+L+ G +   I K K +
Subjt:  NGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKH-NGTSILIVSLYVDDLLVTGNNADHIQKFKWE

Query:  MMKMFEMTDLGLMSYFLGIEI--KQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEG------YFRSLIGYLMY-LTATRPD
        + K F+M DLG     LG++I  ++   ++++ Q+KY + +L++F M   K VSTP+    KL K+     V+E        + S +G LMY +  TRPD
Subjt:  MMKMFEMTDLGLMSYFLGIEI--KQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEG------YFRSLIGYLMY-LTATRPD

Query:  ILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMFYS
        I + V ++SRF+    + H +A K ++RY++GT+   + F  G +  L   +D+D  G ID+ + + GY   +S
Subjt:  ILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMFYS

P25600 Putative transposon Ty5-1 protein YCL074W8.3e-3331.97Show/hide
Query:  LDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADH
        +DV +AFLN  + E IYV+Q  G   +   + V+ L   +YGLKQAP  W   I+  L  +GF +   E  LY +      + +++YVDDLLV   +   
Subjt:  LDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVTGNNADH

Query:  IQKFKWEMMKMFEMTDLGLMSYFLGIEIKQ-GQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTAT-RPD
          + K E+ K++ M DLG +  FLG+ I Q   G++ +  + Y  +   + +++  K   TP+   + L +       D   ++S++G L++   T RPD
Subjt:  IQKFKWEMMKMFEMTDLGLMSYFLGIEIKQ-GQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGYLMYLTAT-RPD

Query:  ILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGY
        I   VS+LSRF+     +HL++A+RV+RY+  T    +K+  G +  L    D+  G   D    T GY
Subjt:  ILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGY

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.3e-8040.31Show/hide
Query:  AKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDR-KVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF
        A+ EP    +A KD+RW  AM  E++    N TW LV  P     ++G RW+F  K N DG +N++KARLV KGY Q  G+DY++TF+PV +  +IR++ 
Subjt:  AKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDR-KVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLF

Query:  TITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYV
         +   + W + QLDV +AFL G L +++Y+ Q  G   +   N V  L+KALYGLKQAPRAWY ++  +LL++GF+ S+S+++L+V   G SI+ + +YV
Subjt:  TITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYV

Query:  DDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGY
        DD+L+TGN+   +      + + F + D   + YFLGIE K+    + + Q++Y  ++L +  M   K V+TPM    KL    G    D   +R ++G 
Subjt:  DDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGY

Query:  LMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF
        L YL  TRPDI   V+ LS+FMH  +E HL+A KR++RY+ GT + G+   +G    L + SD+DW G  DD   T GY ++
Subjt:  LMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.5e-7838.92Show/hide
Query:  YERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDR-KVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMD
        Y     A  EP    +A KD RW  AM  E++    N TW LV  P     ++G RW+F  K N DG +N++KARLV KGY Q  G+DY++TF+PV +  
Subjt:  YERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDR-KVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMD

Query:  TIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSIL
        +IR++  +   + W + QLDV +AFL G L +E+Y+ Q  G   +   + V  L+KA+YGLKQAPRAWY ++  +LL++GF+ S+S+++L+V   G SI+
Subjt:  TIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSIL

Query:  IVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF
         + +YVDD+L+TGN+   ++     + + F + +   + YFLGIE K+    + + Q++Y  ++L +  M   K V+TPM    KL    G    D   +
Subjt:  IVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF

Query:  RSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF
        R ++G L YL  TRPD+   V+ LS++MH  ++ H  A KRV+RY+ GT D G+   +G    L + SD+DW G  DD   T GY ++
Subjt:  RSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.4e-7739.18Show/hide
Query:  CNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
        C     EP+ Y EAK+   W  AM +E+  +E   TW +   P ++K IG +WV++ K N DG I ++KARLV KGY Q  G+D+ +TF+PV ++ +++L
Subjt:  CNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL

Query:  LFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEG-CEKQGEG---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSIL
        +  I+A   + L+QLD+ +AFLNG L EEIY++   G   +QG+    N V  LKK++YGLKQA R W+ K    L+  GF++S S+ T ++K   T  L
Subjt:  LFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEG-CEKQGEG---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSIL

Query:  IVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF
         V +YVDD+++  NN   + + K ++   F++ DLG + YFLG+EI +    + ICQ+KYA ++L +  +  CK  S PM+         G D VD   +
Subjt:  IVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF

Query:  RSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF
        R LIG LMYL  TR DI   V+ LS+F       H +A  +++ Y+KGT   G+ ++   E +L   SD+ +    D  R T GYCMF
Subjt:  RSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.3e-0936.71Show/hide
Query:  MYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYC
        MYLT TRPD+   V+ LS+F   +    ++A  +V+ YVKGT   G+ ++   + +L + +DSDW    D  R   G+C
Subjt:  MYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein3.0e-3039.46Show/hide
Query:  LYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSL
        LYVDD+L+TG++   +    +++   F M DLG + YFLGI+IK     +F+ Q KYA++IL    M +CK +STP+  K        A   D   FRS+
Subjt:  LYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSL

Query:  IGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF
        +G L YLT TRPDI   V+I+ + MH  +       KRV+RYVKGT   G+   +  +  + +  DSDW G     R T G+C F
Subjt:  IGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMF

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.3e-2044.66Show/hide
Query:  KCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTI
        K EP +   A KD  W  AM+EEL  + +NKTWILV  P ++ ++G +WVF+TKL+ DG +++ KARLV KG+ Q  G+ + +T++PV R  TIR +  +
Subjt:  KCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFTI

Query:  TAQ
          Q
Subjt:  TAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCAAGCTTTTTGATTCAAGCGTTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAAGTTGCTTTCTGATATTTATGA
AAGGTGTAATGTTGCTAAGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGGTAGTTGCAATGAAGGAGGAGTTGTCAATGATAGAGAAGAACAAAA
CTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAGATGGGTATTTAGAACCAAGCTTAATGTTGATGGCTGGATTAACAAGCACAAAGCCAGGCTT
GTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATTAGGTTACTATTTACAATAACTGCACAAAAGGG
GTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCTCGAAGGATGTGAGAAGCAAGGTGAAGGAAATA
AAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCA
GAATCAACCTTATATGTTAAGCACAATGGTACTAGCATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAAGTTCAA
ATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAAT
ATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCAGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGAT
GAAGGATATTTCAGGAGTTTAATTGGTTACTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGTTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGA
ATTACATCTTAAGGCAGCAAAAAGAGTGATTCGATATGTTAAAGGCACAAGTGATTTTGGCGTTAAGTTCACTAGGGGCAAGGAGTTCAAGCTGATTAGTCTTTCTGATA
GTGATTGGGGAGGTTCCATTGATGATATGAGAGGCACTTTAGGCTACTGCATGTTTTACTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCAAGCTTTTTGATTCAAGCGTTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAAGTTGCTTTCTGATATTTATGA
AAGGTGTAATGTTGCTAAGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGGTAGTTGCAATGAAGGAGGAGTTGTCAATGATAGAGAAGAACAAAA
CTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAGATGGGTATTTAGAACCAAGCTTAATGTTGATGGCTGGATTAACAAGCACAAAGCCAGGCTT
GTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATTAGGTTACTATTTACAATAACTGCACAAAAGGG
GTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCTCGAAGGATGTGAGAAGCAAGGTGAAGGAAATA
AAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCA
GAATCAACCTTATATGTTAAGCACAATGGTACTAGCATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAAGTTCAA
ATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAAT
ATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCAGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGAT
GAAGGATATTTCAGGAGTTTAATTGGTTACTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGTTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGA
ATTACATCTTAAGGCAGCAAAAAGAGTGATTCGATATGTTAAAGGCACAAGTGATTTTGGCGTTAAGTTCACTAGGGGCAAGGAGTTCAAGCTGATTAGTCTTTCTGATA
GTGATTGGGGAGGTTCCATTGATGATATGAGAGGCACTTTAGGCTACTGCATGTTTTACTCTTAG
Protein sequenceShow/hide protein sequence
MKFKLFDSSVEEEDDRQNEIVDDASVRGTKLLSDIYERCNVAKCEPANYAEAKKDQRWVVAMKEELSMIEKNKTWILVDRPQDRKVIGVRWVFRTKLNVDGWINKHKARL
VVKGYAQIFGVDYSDTFAPVARMDTIRLLFTITAQKGWKLYQLDVKSAFLNGVLQEEIYVEQLEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLS
ESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQKFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVD
EGYFRSLIGYLMYLTATRPDILNVVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISLSDSDWGGSIDDMRGTLGYCMFYS