; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0101201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0101201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:17468341..17469981
RNA-Seq ExpressionCmc04g0101201
SyntenyCmc04g0101201
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa]2.4e-30396.15Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTE EHEEHLR+VLQTLRDNKLYAKF KCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL E GQAVEFS+SSDGGLLFERRLCVPSDSA+KT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

KAA0040689.1 pol protein [Cucumis melo var. makuwa]4.7e-30496.52Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSISSDGGLLFERRLCVPSDSA+KT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

KAA0046185.1 pol protein [Cucumis melo var. makuwa]1.8e-30396.52Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGH+VSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

KAA0048687.1 pol protein [Cucumis melo var. makuwa]3.6e-30496.52Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

TYK01613.1 pol protein [Cucumis melo var. makuwa]1.8e-30396.34Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQ  EFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

TrEMBL top hitse value%identityAlignment
A0A5A7T190 Reverse transcriptase1.1e-30396.15Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTE EHEEHLR+VLQTLRDNKLYAKF KCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL E GQAVEFS+SSDGGLLFERRLCVPSDSA+KT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

A0A5A7THE6 Reverse transcriptase2.3e-30496.52Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSISSDGGLLFERRLCVPSDSA+KT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

A0A5A7TXM6 Reverse transcriptase8.7e-30496.52Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGH+VSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

A0A5A7U330 Reverse transcriptase1.8e-30496.52Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

A0A5D3BPI1 Reverse transcriptase8.7e-30496.34Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ+PLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQ  EFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLV
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.2e-8540.2Show/hide
Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKT
        +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +++P+P +D++  +L     F+ IDL  G+HQ+ +    V KT
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKT

Query:  AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAGV
        AF +++GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+++  +  EH + L +V + L    L  +  KCEF  +  +FLGHV++  G+
Subjt:  AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAGV

Query:  SVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
          +P KIEA+     P+   E+++FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + +DAS   L
Subjt:  SVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I  DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSR
        LSR
Subjt:  LSR

P0CT34 Transposon Tf2-1 polyprotein2.1e-8431.71Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+  YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+ K+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V    +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC

P0CT35 Transposon Tf2-2 polyprotein2.1e-8431.71Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+  YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+ K+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V    +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC

P0CT41 Transposon Tf2-12 polyprotein2.1e-8431.71Show/hide
Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+  YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+ K+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V    +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC

P20825 Retrovirus-related Pol polyprotein from transposon 2975.4e-8539.3Show/hide
Query:  ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTA
        E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ ++YP+P +D++  +L     F+ IDL  G+HQ+ + +  + KTA
Subjt:  ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTA

Query:  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAGVS
        F ++ GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+  +  EH   +++V   L D  L  +  KCEF  K  +FLGH+V+  G+ 
Subjt:  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAGVS

Query:  VDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG
         +P K++A+     P+   E+R+FLGL GYYR+F+ N++ IA P+T   +KR      K    ++F+ LK  ++  P+L +PD    FV+ +DAS   LG
Subjt:  VDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG

Query:  CVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL
         VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I  DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADAL
Subjt:  CVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL

Query:  SR
        SR
Subjt:  SR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.9e-2443.51Show/hide
Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLG--HVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVW
        HL +VLQ    ++ YA   KC F    +++LG  H++S  GVS DPAK+EA+ G   P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLG--HVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAGTTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGATCTATTTGACCAGTTAC
ATGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTTGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGA
TGATATCTTGATATACTTCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGT
TTTGGCTGAAGCCGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTCGACCCGACCTTCCACAGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGAGAGCTCCTTT
TGTTTGGAGCAAGGCATGTGAAGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCCGGCAGTTTTGTGATTTATAGTG
ATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTCA
GAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCATGGATCATAAGAGCTTGAAATACTCCTTTACTCAGAA
GGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAA
AGGTATCACATTCCGCAGCACTTATTACCCGACAGTCCCCATTGCATCGAGATCTGGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAG
TTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGTAGAGGCAGGGCAAGCGGTTGAGTTCTC
CATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGC
ACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAGTTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGATCTATTTGACCAGTTAC
ATGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTTGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGA
TGATATCTTGATATACTTCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGT
TTTGGCTGAAGCCGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTCGACCCGACCTTCCACAGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGAGAGCTCCTTT
TGTTTGGAGCAAGGCATGTGAAGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCCGGCAGTTTTGTGATTTATAGTG
ATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTCA
GAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCATGGATCATAAGAGCTTGAAATACTCCTTTACTCAGAA
GGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAA
AGGTATCACATTCCGCAGCACTTATTACCCGACAGTCCCCATTGCATCGAGATCTGGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAG
TTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGTAGAGGCAGGGCAAGCGGTTGAGTTCTC
CATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGC
ACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGA
Protein sequenceShow/hide protein sequence
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTV
SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDS
ELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQ
LTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV