; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0101221 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0101221
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:17504361..17505176
RNA-Seq ExpressionCmc04g0101221
SyntenyCmc04g0101221
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR021109 - Aspartic peptidase domain superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037291.1 pol protein [Cucumis melo var. makuwa]2.4e-14798.51Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

KAA0038231.1 gag protease polyprotein [Cucumis melo var. makuwa]1.2e-14698.14Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTW ILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

KAA0043391.1 pol protein [Cucumis melo var. makuwa]2.4e-14798.51Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

KAA0053290.1 gag protease polyprotein [Cucumis melo var. makuwa]1.5e-14698.14Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

TYK01613.1 pol protein [Cucumis melo var. makuwa]2.4e-14798.51Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

TrEMBL top hitse value%identityAlignment
A0A5A7T6R9 Reverse transcriptase1.2e-14798.51Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

A0A5A7T9B7 Gag protease polyprotein5.7e-14798.14Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTW ILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

A0A5A7TP96 Reverse transcriptase1.2e-14798.51Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

A0A5A7UDK9 Gag protease polyprotein7.5e-14798.14Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

A0A5D3BPI1 Reverse transcriptase1.2e-14798.51Show/hide
Query:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREADVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREADVSLSSEPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
        DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS
Subjt:  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMS

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.5e-2437.67Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM
          ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM

P0CT41 Transposon Tf2-12 polyprotein3.5e-2437.67Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM
          ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.2e-2941.67Show/hide
Query:  VVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN
        ++R+ L   P ++  +P    V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ +
Subjt:  VVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN

Query:  RYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM
         +PLPRID+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM
Subjt:  RYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.2e-2941.67Show/hide
Query:  VVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN
        ++R+ L   P ++  +P    V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ +
Subjt:  VVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN

Query:  RYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM
         +PLPRID+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM
Subjt:  RYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM

Q9UR07 Transposon Tf2-11 polyprotein3.5e-2437.67Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM
          ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVM

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGTTGGACTTTGATGTAATCCTGGGTAT
GGATTGGTTGGCCGTTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAGGTCGT
TGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCATCA
GAACCAGTAGTGAGGGACTATCTGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTAT
ATCCAGAGCCCCTTACAGGATGGCCCCCACAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTG
CGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGAC
GATCTATTTGACCAGTTACAGGGAGCCACAGTGTTTTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCG
TTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGTTGGACTTTGATGTAATCCTGGGTAT
GGATTGGTTGGCCGTTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAGGTCGT
TGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCATCA
GAACCAGTAGTGAGGGACTATCTGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTAT
ATCCAGAGCCCCTTACAGGATGGCCCCCACAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTG
CGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGAC
GATCTATTTGACCAGTTACAGGGAGCCACAGTGTTTTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCG
TTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTGGTTTGA
Protein sequenceShow/hide protein sequence
MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSS
EPVVRDYLDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID
DLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSLV