CuGenDBv2

Gene ID	Cmc04g0101231
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:17505197..17507130
RNA-Seq Expression	Cmc04g0101231
Synteny	Cmc04g0101231
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0016020 - membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.57

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+ LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQ  EFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVSKCLVCQQVKAPRQKP GLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.03

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.19

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.88

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR ATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        +YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFI GLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYT SKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSP+CW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

KAA0066456.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.88

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGL GYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVS+GAVTMQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQTAEFSLSSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMHPGSTK+YQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+C
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

94.57

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+ LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQ  EFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVSKCLVCQQVKAPRQKP GLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

A0A5A7U330 Reverse transcriptase

0.0e+00

95.03

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

A0A5A7UAA8 Reverse transcriptase

0.0e+00

95.19

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

A0A5A7UP94 Pol protein

0.0e+00

94.88

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR ATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        +YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFI GLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYT SKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KC
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSP+CW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

A0A5A7VJE2 Reverse transcriptase

0.0e+00

94.88

Show/hide

Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM LQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP
        LGL GYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF                  GKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF------------------GKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVS+GAVTMQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQTAEFSLSSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMHPGSTK+YQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+C
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
        CRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS
Subjt:  CRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.7e-88

30.52

Show/hide

Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++  LQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN
          Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S            + G V            V Y S ++   + N
Subjt:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP

Query:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K
Subjt:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

P0CT35 Transposon Tf2-2 polyprotein

2.7e-88

30.52

Show/hide

Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++  LQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN
          Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S            + G V            V Y S ++   + N
Subjt:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP

Query:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K
Subjt:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

P0CT36 Transposon Tf2-3 polyprotein

2.7e-88

30.52

Show/hide

Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++  LQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN
          Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S            + G V            V Y S ++   + N
Subjt:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP

Query:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K
Subjt:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

P0CT37 Transposon Tf2-4 polyprotein

2.7e-88

30.52

Show/hide

Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++  LQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN
          Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S            + G V            V Y S ++   + N
Subjt:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP

Query:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K
Subjt:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

P0CT41 Transposon Tf2-12 polyprotein

2.7e-88

30.52

Show/hide

Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++  LQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN
          Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S            + G V            V Y S ++   + N
Subjt:  AGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG-----------SFGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP

Query:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K
Subjt:  FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.0e-26

45.6

Show/hide

Query:  HLRMALQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVW
        HL M LQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K     W
Subjt:  HLRMALQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPD
        ++    +F+ LK  + T PVL +PD
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTT
ACGTATGGCTTTGCAAACACTTCGGGATAATAAGTTATACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTG
GAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTT
GTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGGGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAA
GCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACAC
ATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTT
ACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCT
TAGTAGGAAGGTGTCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGT
TAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCT
GAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATT
TTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTATGTC
AGCAGGTTAAGGCACCAAGGCAGAAACCGGCGGGTTTATTACAACCCTTGAGCATACCGAAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGA
ACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAAACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTA
CATGTCTGAGATAGTGAGATTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGA
GGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGC
TGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGT
TTGCTGGGATGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGAC
AGAAGAGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF
VENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA
EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPR
TLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGS
WDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKS

Cmc04g0101231 (gene) of Melon (Charmono) v1.1 genome