| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042920.1 pol polyprotein [Cucumis melo var. makuwa] | 2.0e-67 | 89.36 | Show/hide |
Query: IAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARSTMESEFIALD
+AYA+SKLSRYTSNPGQDHWKAILRIL YLKHTKNYGLHY+CYP +LEGYSDANWISSTKD+KSTS YIF L GGAVSWKSSKQTCIA+STMESEFIALD
Subjt: IAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARSTMESEFIALD
Query: KAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
KAGEEAEWLRN LE IL+WSKPV AICIHSDSQAAIGRARN
Subjt: KAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| KAF5959243.1 hypothetical protein HYC85_000452 [Camellia sinensis] | 1.5e-62 | 76.82 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M++M+CTRPDIAYA+SKLSRYTSNPG+DHWKAI+R+L YL+ T ++GL++T YP +LEGY DANWIS TKD+KSTS Y+FTL G AVSWKS+KQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
TMESEFIALDKAGEEAEWLR+ LEDI W KPV AICIH DSQ+AIGRA+N
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| RVW67960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.9e-66 | 78.81 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M++M+CT PDIAY+VSKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+T YP +LEGYSDANWIS +KD+KSTS Y+FTL G AVSWKSSKQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
TMESEFIA+DKAGEEAEWLRN LEDI +WSKPVSAICIH DSQ+AIGRA++
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| RVW84500.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 6.5e-66 | 78.15 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M++M+CTRPDIAY+VSKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+T YP +LEGY+DANWIS +KD+KSTS Y+FTL G AVSWKSSKQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
TMESEFIA+DKAGEEAEWLRN LEDI +WSKPV AICIH DSQ AIGRA++
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| RVW87556.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.7e-66 | 78.81 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M++M+CTRPDIAY+VSKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+T YP +LEGYSDANWIS +KD+KSTS Y+FTL G AVSWKSSKQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
TMESEFIA+DKAGEEAEWLRN LEDI +WSKPV AICIH DSQ+AIGRA++
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9IDC7 Integrase catalytic domain-containing protein | 1.8e-66 | 75.76 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M+IM+CTRPDIAYAVSKLSRYTSNPG+DHWKAI+R+L YLK+T NYG+HYT YP +LEGYSDANWIS T DTKSTS Y+FTL G AVSWKSSKQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARNTECSFFFNLSTYHL
TMESEFIALDKAGEEAEWLR+ LED+ W+KPV ICIH DSQ+AIGRAR S+ +N + H+
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARNTECSFFFNLSTYHL
|
|
| A0A438G6X1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-66 | 78.81 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M++M+CT PDIAY+VSKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+T YP +LEGYSDANWIS +KD+KSTS Y+FTL G AVSWKSSKQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
TMESEFIA+DKAGEEAEWLRN LEDI +WSKPVSAICIH DSQ+AIGRA++
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| A0A438HJ39 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-66 | 78.15 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M++M+CTRPDIAY+VSKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+T YP +LEGY+DANWIS +KD+KSTS Y+FTL G AVSWKSSKQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
TMESEFIA+DKAGEEAEWLRN LEDI +WSKPV AICIH DSQ AIGRA++
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| A0A438HSX0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.2e-67 | 78.81 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M++M+CTRPDIAY+VSKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+T YP +LEGYSDANWIS +KD+KSTS Y+FTL G AVSWKSSKQTCIARS
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
TMESEFIA+DKAGEEAEWLRN LEDI +WSKPV AICIH DSQ+AIGRA++
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| A0A5A7THY2 Pol polyprotein | 9.7e-68 | 89.36 | Show/hide |
Query: IAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARSTMESEFIALD
+AYA+SKLSRYTSNPGQDHWKAILRIL YLKHTKNYGLHY+CYP +LEGYSDANWISSTKD+KSTS YIF L GGAVSWKSSKQTCIA+STMESEFIALD
Subjt: IAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARSTMESEFIALD
Query: KAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
KAGEEAEWLRN LE IL+WSKPV AICIHSDSQAAIGRARN
Subjt: KAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARN
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.0e-21 | 37.11 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHY---TCYPVLLEGYSDANWISSTKDTKSTSDYIFTL-DGGAVSWKSSKQTC
M+IM CTRPD+ AV+ LSRY+S + W+ + R+L YLK T + L + + + GY D++W S D KST+ Y+F + D + W + +Q
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHY---TCYPVLLEGYSDANWISSTKDTKSTSDYIFTL-DGGAVSWKSSKQTC
Query: IARSTMESEFIALDKAGEEAEWLRNLLEDI-LSWSKPVSAICIHSDSQAAIGRARNTEC
+A S+ E+E++AL +A EA WL+ LL I + P+ I+ D+Q I A N C
Subjt: IARSTMESEFIALDKAGEEAEWLRNLLEDI-LSWSKPVSAICIHSDSQAAIGRARNTEC
|
|
| P0CV72 Secreted RxLR effector protein 161 | 5.2e-26 | 47.5 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYT-CYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIAR
M++M TRPD+A AV LS++ S+P HW+A+ R+L YL+ T+ YGL +T L GYSDA+W + +STS Y+F L+GG VSW+S KQ +A
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYT-CYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIAR
Query: STMESEFIALDKAGEEAEWL
S+ E E++AL +A +EA WL
Subjt: STMESEFIALDKAGEEAEWL
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-28 | 41.45 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
M+ M CTRPDIA+AV +SR+ NPG++HW+A+ IL YL+ T L + +L+GY+DA+ + KS++ Y+FT GGA+SW+S Q C+A S
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVLLEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIARS
Query: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARNT
T E+E+IA + G+E WL+ L+++ K C DSQ+AI ++N+
Subjt: TMESEFIALDKAGEEAEWLRNLLEDILSWSKPVSAICIHSDSQAAIGRARNT
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.8e-18 | 37.01 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVL-LEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIAR
+ ++ TRPDI+YAV++LS++ P ++H +A+ RIL YL T N+G+ L L YSDA+W D ST+ YI L +SW S KQ + R
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVL-LEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIAR
Query: STMESEFIALDKAGEEAEWLRNLLEDI
S+ E+E+ ++ E +W+ +LL ++
Subjt: STMESEFIALDKAGEEAEWLRNLLEDI
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.3e-20 | 36.69 | Show/hide |
Query: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVL-LEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIAR
+ ++ TRPD++YAV++LS+Y P DHW A+ R+L YL T ++G+ L L YSDA+W T D ST+ YI L +SW S KQ + R
Subjt: MHIMSCTRPDIAYAVSKLSRYTSNPGQDHWKAILRILGYLKHTKNYGLHYTCYPVL-LEGYSDANWISSTKDTKSTSDYIFTLDGGAVSWKSSKQTCIAR
Query: STMESEFIALDKAGEEAEWLRNLLEDI-LSWSKPVSAIC
S+ E+E+ ++ E +W+ +LL ++ + S P C
Subjt: STMESEFIALDKAGEEAEWLRNLLEDI-LSWSKPVSAIC
|
|
