; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0101281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0101281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:17582893..17583939
RNA-Seq ExpressionCmc04g0101281
SyntenyCmc04g0101281
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]7.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

TYK27290.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

TYK27507.1 reverse transcriptase [Cucumis melo var. makuwa]7.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

TrEMBL top hitse value%identityAlignment
A0A5A7T1Y5 Reverse transcriptase3.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

A0A5A7U2V7 Reverse transcriptase3.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

A0A5A7UNA3 Reverse transcriptase3.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

A0A5D3BHI1 Reverse transcriptase3.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

A0A5D3BS67 Reverse transcriptase3.8e-16992.88Show/hide
Query:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------
        EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ            
Subjt:  EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------------

Query:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
                 RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGC AFLAH VVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL
Subjt:  ---------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELL

Query:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
        PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRL IDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY
Subjt:  PGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGY

Query:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
        HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV
Subjt:  HQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAV

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.3e-2837.57Show/hide
Query:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQ
        +PE   + KEF D+  + +   LP P + +EF +EL      +    Y + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ 
Subjt:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQ

Query:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA
        LNK    N YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G++ APA
Subjt:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA

P0CT35 Transposon Tf2-2 polyprotein1.3e-2837.57Show/hide
Query:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQ
        +PE   + KEF D+  + +   LP P + +EF +EL      +    Y + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ 
Subjt:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQ

Query:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA
        LNK    N YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G++ APA
Subjt:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA

P0CT41 Transposon Tf2-12 polyprotein1.3e-2837.57Show/hide
Query:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQ
        +PE   + KEF D+  + +   LP P + +EF +EL      +    Y + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ 
Subjt:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQ

Query:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA
        LNK    N YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G++ APA
Subjt:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.3e-3343.03Show/hide
Query:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRN
        +++  L   P D++ +P    ++  IE+ PG       PY +     +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RL +DYR LNK TI +
Subjt:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRN

Query:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA
         +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+
Subjt:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.3e-3343.03Show/hide
Query:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRN
        +++  L   P D++ +P    ++  IE+ PG       PY +     +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RL +DYR LNK TI +
Subjt:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRN

Query:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA
         +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+
Subjt:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGAATTACTGGTACCAGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTT
TGTTTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTAC
GTAATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTT
TTTAGAGGCATGAGGAAGGCCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCAAAGCGTTTCTTGCACACAACGTAGTAGTGCA
GAGAGAAAAACTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAGATGATCTATCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTG
AATTATTACCAGGAACAGCACCTATTTCACAGGCCCCGTATAGAATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATC
AGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATATATTGACTATAGACAGTTAAACAAGGTTACAATACGTAA
CAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAAT
CAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTCATGGATCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGAATTACTGGTACCAGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTT
TGTTTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTAC
GTAATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTT
TTTAGAGGCATGAGGAAGGCCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCAAAGCGTTTCTTGCACACAACGTAGTAGTGCA
GAGAGAAAAACTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAGATGATCTATCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTG
AATTATTACCAGGAACAGCACCTATTTCACAGGCCCCGTATAGAATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATC
AGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATATATTGACTATAGACAGTTAAACAAGGTTACAATACGTAA
CAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAAT
CAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTCATGGATCTCATGA
Protein sequenceShow/hide protein sequence
MPELLVPEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQRKEVVFRKPGFAEVV
FRGMRKAVSRSLISVLKAEKLLRKGCKAFLAHNVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYI
RPSVSPWGAPVLFVKKKDGTLRLYIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVSWIS