| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047979.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.7e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| TYJ96309.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.7e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| TYK06895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.7e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| TYK08113.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.7e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| TYK18362.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.7e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SJX6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| A0A5A7UNW6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| A0A5A7V308 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| A0A5A7V3X9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| A0A5D3D497 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-190 | 94.2 | Show/hide |
Query: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
MKNNILSLGQLLEKGYNILMKDYSLLI+DNHDKIIAKVQMTKN MFLLNI TDVAQCLKSCLKDPNWIWHLRF HLNF GLRLLARKNMVKGLPY+K PD
Subjt: MKNNILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD
Query: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
QLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDFS+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GG
Subjt: QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGG
Query: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
EFT NEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLWNKT QQAWTGRKPSIGH RVF C
Subjt: EFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRC
Query: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKT++
Subjt: MAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTML
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.4e-57 | 38.04 | Show/hide |
Query: NILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPN--WIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD-
N++S+ +L E G +I + I N + + KN L N+P Q K N +WH RF H++ L + RKNM + + +
Subjt: NILSLGQLLEKGYNILMKDYSLLIKDNHDKIIAKVQMTKNIMFLLNIPTDVAQCLKSCLKDPN--WIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD-
Query: --QLCEGCLHGKQSRKSFPQ-ESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD
++CE CL+GKQ+R F Q + + +RPL +VH+D+CGPI P + NYF+ F+D F+ Y +K KS+VF MF+ F A E + L D
Subjt: --QLCEGCLHGKQSRKSFPQ-ESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD
Query: MGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSL--WNKTSQQAWTGRKPSIGHF
G E+ NE + FC + GI +TVP TPQ NGV ER RTI AR+M+ K+ K FW +AV A YL NR P+++L +KT + W +KP + H
Subjt: MGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSL--WNKTSQQAWTGRKPSIGHF
Query: RVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKK
RVF Y HI + K+ K DDKS K +FVGY+ + G+KL++ V +K
Subjt: RVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.1e-73 | 48.2 | Show/hide |
Query: IWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD-QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFV
+WH R H++ GL++LA+K+++ Y K + C+ CL GKQ R SF Q SS R L+LV++D+CGP++ S G N YF+ FIDD S+K WVY +
Subjt: IWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD-QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFV
Query: KEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVY
K K +VF +F++F ALVE+E+G +K LRSD GGE+T EF+ +C+ +GIR TVP TPQ NGV ER NRTI+ RSML+ K+PK FW +AV+ A Y
Subjt: KEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVY
Query: LSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTM
L NRSP+ L + ++ WT ++ S H +VF C A+AH+P ++R+KLDDKS +F+GY GY+L++PV KK +
Subjt: LSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTM
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| Q12337 Transposon Ty2-GR1 Gag-Pol polyprotein | 3.6e-21 | 25.9 | Show/hide |
Query: KSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD--------QLCEGCLHGKQSRKSFPQESS---SRARRPLELVHTDLCGPIKPSSFGKN
KS K P + H H NF ++ +KN V Y+K D C CL GK ++ + S + P + +HTD+ GP+
Subjt: KSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPD--------QLCEGCLHGKQSRKSFPQESS---SRARRPLELVHTDLCGPIKPSSFGKN
Query: NYFLFFIDDFSQKTWVYFVKEKSE--VFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARS
+YF+ F D+ ++ WVY + ++ E + +F A ++ + + ++ D G E+T F GI T + +GV ER NRT+LN R+
Subjt: NYFLFFIDDFSQKTWVYFVKEKSE--VFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNR--SPTKSLWNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGY----DASSKGYKLYNPV
+L C +P W AVE + + N SP K K+++Q + + + + D K GY +S GY +Y P
Subjt: MLKCKKMPKEFWAQAVECAVYLSNR--SPTKSLWNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGY----DASSKGYKLYNPV
Query: TKKTM
KKT+
Subjt: TKKTM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.0e-31 | 35.78 | Show/hide |
Query: CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGE
C CL K ++ F Q S+ + RPLE +++D+ PI S Y++ F+D F++ TW+Y +K+KS+V F FK L+E I SD GGE
Subjt: CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGE
Query: FTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRCM
F + +++GI + P TP+ NG+ ERK+R I+ ++L +PK +W A AVYL NR PT L ++ Q G P+ RVF C
Subjt: FTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRCM
Query: AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGY
Y + + KLDDKS + VF+GY + Y
Subjt: AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.9e-34 | 32.86 | Show/hide |
Query: VAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPDQL--CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYF
V+ C K + WH R H L +L LP + +L C C K + F S+ + +PLE +++D+ PI S Y+
Subjt: VAQCLKSCLKDPNWIWHLRFRHLNFHGLRLLARKNMVKGLPYIKHPDQL--CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYF
Query: LFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCK
+ F+D F++ TW+Y +K+KS+V F FK+LVE I L SD GGEF + + +++GI + P TP+ NG+ ERK+R I+ M ++L
Subjt: LFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCK
Query: KMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGY
+PK +W A AVYL NR PT L ++ Q G+ P+ +VF C Y + R KL+DKS++ F+GY + Y
Subjt: KMPKEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGY
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