; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0101331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0101331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:17617733..17618548
RNA-Seq ExpressionCmc04g0101331
SyntenyCmc04g0101331
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0032456 - endocytic recycling (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025138.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.5e-10575.93Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        +G+EFEI+DLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC  ADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP E+HME V RILRYLK TPGKGLMFRKT++KTIEAYTDSD  G +VDRKSTSGYCTFVWGNLVTWRSKKQ+VV+RSS EAEY+AMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM
        LQKVLSDLHQECETPLKLF   K  + +  TQF+MIELNMLRLIGISSKKDLTV AYAFRT L+ NRLLM
Subjt:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM

KAA0048014.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.7e-9777.82Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRLFMQAPNEKHMEVVNRILRYLKN
        MG+EFEIKDLGNLKYFL MEV RSKE IS+SQRK+TLDL   TGML C PADTP +FN KLGNSDDQ           FMQAP E+HME V RIL+YLK 
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRLFMQAPNEKHMEVVNRILRYLKN

Query:  TPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFVIIK
        TPGK L+FRKT++KTI+AYTDSD  G V+DRKSTSGYC FVWGNLVTWRSKKQS++ARSS EAEYRAMSLGICEEIWLQKVLSDLHQ+CETPLKLF   K
Subjt:  TPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFVIIK

Query:  -LLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM
         LLLVLLTTQF+MIELNMLRLI ISSKKDLTV AYAFRTFL+ +RLLM
Subjt:  -LLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]2.1e-9482.65Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        MGDEFEIKDLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC PADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP EKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD  G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLF
        LQKVLSDLHQECETPLKLF
Subjt:  LQKVLSDLHQECETPLKLF

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]2.1e-9482.65Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        MGDEFEIKDLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC PADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP EKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD  G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLF
        LQKVLSDLHQECETPLKLF
Subjt:  LQKVLSDLHQECETPLKLF

TYK23097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.7e-10576.3Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        +G+EFEI+DLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC  ADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP E+HME V RILRYLK TPGKGLMFRKT++KTIEAYTDSD  G VVDRKSTSGYCTFVWGNLVTWRSKKQ+VV+RSS EAEY+AMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM
        LQKVLSDLHQECETPLKLF   K  + +  TQF+MIELNMLRLIGISSKKDLTV AYAFRT L+ NRLLM
Subjt:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM

TrEMBL top hitse value%identityAlignment
A0A5A7SG80 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-10575.93Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        +G+EFEI+DLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC  ADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP E+HME V RILRYLK TPGKGLMFRKT++KTIEAYTDSD  G +VDRKSTSGYCTFVWGNLVTWRSKKQ+VV+RSS EAEY+AMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM
        LQKVLSDLHQECETPLKLF   K  + +  TQF+MIELNMLRLIGISSKKDLTV AYAFRT L+ NRLLM
Subjt:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM

A0A5A7TYB2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-9777.82Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRLFMQAPNEKHMEVVNRILRYLKN
        MG+EFEIKDLGNLKYFL MEV RSKE IS+SQRK+TLDL   TGML C PADTP +FN KLGNSDDQ           FMQAP E+HME V RIL+YLK 
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRLFMQAPNEKHMEVVNRILRYLKN

Query:  TPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFVIIK
        TPGK L+FRKT++KTI+AYTDSD  G V+DRKSTSGYC FVWGNLVTWRSKKQS++ARSS EAEYRAMSLGICEEIWLQKVLSDLHQ+CETPLKLF   K
Subjt:  TPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFVIIK

Query:  -LLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM
         LLLVLLTTQF+MIELNMLRLI ISSKKDLTV AYAFRTFL+ +RLLM
Subjt:  -LLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM

A0A5D3BJK7 Beta-galactosidase1.0e-9482.65Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        MGDEFEIKDLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC PADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP EKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD  G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLF
        LQKVLSDLHQECETPLKLF
Subjt:  LQKVLSDLHQECETPLKLF

A0A5D3C4T4 Beta-galactosidase1.0e-9482.65Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        MGDEFEIKDLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC PADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP EKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD  G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLF
        LQKVLSDLHQECETPLKLF
Subjt:  LQKVLSDLHQECETPLKLF

A0A5D3DHC0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-10576.3Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        +G+EFEI+DLGNLKYFL MEV RSKE ISVSQRKYTLDLLT TGMLGC  ADTP +FNCKLGNSDDQ PVDKEQYQRL                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FMQAP E+HME V RILRYLK TPGKGLMFRKT++KTIEAYTDSD  G VVDRKSTSGYCTFVWGNLVTWRSKKQ+VV+RSS EAEY+AMSLGICEEIW
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM
        LQKVLSDLHQECETPLKLF   K  + +  TQF+MIELNMLRLIGISSKKDLTV AYAFRT L+ NRLLM
Subjt:  LQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRLIGISSKKDLTVEAYAFRTFLQTNRLLM

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.3e-2130.45Show/hide
Query:  DEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADT--PTKFNCKLGNSDD------QAPVDKEQYQRL---------------F
        ++F + DL  +K+F+ + +   ++ I +SQ  Y   +L++  M  C    T  P+K N +L NSD+      ++ +    Y  L               +
Subjt:  DEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADT--PTKFNCKLGNSDD------QAPVDKEQYQRL---------------F

Query:  MQAPNEKHMEVVNRILRYLKNTPGKGLMFRK--TNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWG-NLVTWRSKKQSVVARSSVEAEYRAMSLGICEEI
            N +  + + R+LRYLK T    L+F+K       I  Y DSD  G  +DRKST+GY   ++  NL+ W +K+Q+ VA SS EAEY A+   + E +
Subjt:  MQAPNEKHMEVVNRILRYLKNTPGKGLMFRK--TNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWG-NLVTWRSKKQSVVARSSVEAEYRAMSLGICEEI

Query:  WLQKVLSDLHQECETPLKLF
        WL+ +L+ ++ + E P+K++
Subjt:  WLQKVLSDLHQECETPLKLF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.4e-1830.18Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSK--EDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNS------DDQAPVDKEQYQRL--------------
        +   F++KDLG  +  L M++ R +    + +SQ KY   +L R  M    P  TP   + KL         +++  + K  Y                 
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSK--EDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNS------DDQAPVDKEQYQRL--------------

Query:  ----------FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAM
                  F++ P ++H E V  ILRYL+ T G  L F  ++   ++ YTD+D+ G + +RKS++GY     G  ++W+SK Q  VA S+ EAEY A 
Subjt:  ----------FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAM

Query:  SLGICEEIWLQKVLSD--LHQE
        +    E IWL++ L +  LHQ+
Subjt:  SLGICEEIWLQKVLSD--LHQE

P92519 Uncharacterized mitochondrial protein AtMg008103.7e-2533.67Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADT--PTKFNCKLGN------SDDQAPVDKEQYQRLF-------------
        +   F +KDLG + YFL +++      + +SQ KY   +L   GML C P  T  P K N  +        SD ++ V   QY  L              
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADT--PTKFNCKLGN------SDDQAPVDKEQYQRLF-------------

Query:  -MQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         M  P     +++ R+LRY+K T   GL   K ++  ++A+ DSD  G    R+ST+G+CTF+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Subjt:  -MQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.0e-2734.13Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        +   F +KD   L YFL +E  R    + +SQR+Y LDLL RT M+   P  TP   + KL         D  +Y+ +                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         FM  P E+H++ + RILRYL  TP  G+  +K N  ++ AY+D+D  G   D  ST+GY  ++  + ++W SKKQ  V RSS EAEYR+++    E  W
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDL
        +  +L++L
Subjt:  LQKVLSDL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-2632.56Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------
        +   F +K+  +L YFL +E  R  + + +SQR+YTLDLL RT ML   P  TP   + KL         D  +Y+ +                      
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL----------------------

Query:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         +M  P + H   + R+LRYL  TP  G+  +K N  ++ AY+D+D  G   D  ST+GY  ++  + ++W SKKQ  V RSS EAEYR+++    E  W
Subjt:  -FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Query:  LQKVLSDLHQECETP
        +  +L++L  +   P
Subjt:  LQKVLSDLHQECETP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.1e-3536.28Show/hide
Query:  FEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL-----------------------FMQ
        F+++DLG LKYFL +E+ RS   I++ QRKY LDLL  TG+LGC P+  P   +           VD + Y+RL                       F +
Subjt:  FEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRL-----------------------FMQ

Query:  APNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKV
        AP   H + V +IL Y+K T G+GL +       ++ ++D+        R+ST+GYC F+  +L++W+SKKQ VV++SS EAEYRA+S    E +WL + 
Subjt:  APNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKV

Query:  LSDLHQECETPLKLF
          +L      P  LF
Subjt:  LSDLHQECETPLKLF

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.4e-0533.33Show/hide
Query:  FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFV
        F  A     M+ V ++L Y+K T G+GL +  T+   ++A+ DSD       R+S +G+C+ V
Subjt:  FMQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFV

ATMG00810.1 DNA/RNA polymerases superfamily protein2.7e-2633.67Show/hide
Query:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADT--PTKFNCKLGN------SDDQAPVDKEQYQRLF-------------
        +   F +KDLG + YFL +++      + +SQ KY   +L   GML C P  T  P K N  +        SD ++ V   QY  L              
Subjt:  MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADT--PTKFNCKLGN------SDDQAPVDKEQYQRLF-------------

Query:  -MQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
         M  P     +++ R+LRY+K T   GL   K ++  ++A+ DSD  G    R+ST+G+CTF+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Subjt:  -MQAPNEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCCTTAGAATGGAGGTGACTAGATCTAAAGAAGATATCTCCGTATCTCAGAGAAAATACACCCT
TGATTTGCTAACCAGGACAGGTATGTTGGGATGTCTTCCTGCTGATACACCTACTAAATTCAATTGTAAACTAGGAAACTCTGATGATCAAGCTCCAGTTGATAAAGAAC
AATATCAGCGCCTTTTTATGCAGGCTCCAAATGAGAAACATATGGAAGTTGTTAACAGAATTTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAA
ACAAATAGAAAGACCATTGAAGCATATACTGACTCCGATTTGATAGGATTTGTTGTTGATAGAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAAC
TTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGTTGAGGCTGAATACAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAG
ATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTGTGATAATAAAGTTGCTATTAGTATTGCTAACAACCCAGTTCAACATGATAGAACTAAACATGTTGAGATTG
ATTGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGCATTCCGTACATTCCTTCAAACCAACAGGTTGCTGATGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCCTTAGAATGGAGGTGACTAGATCTAAAGAAGATATCTCCGTATCTCAGAGAAAATACACCCT
TGATTTGCTAACCAGGACAGGTATGTTGGGATGTCTTCCTGCTGATACACCTACTAAATTCAATTGTAAACTAGGAAACTCTGATGATCAAGCTCCAGTTGATAAAGAAC
AATATCAGCGCCTTTTTATGCAGGCTCCAAATGAGAAACATATGGAAGTTGTTAACAGAATTTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAA
ACAAATAGAAAGACCATTGAAGCATATACTGACTCCGATTTGATAGGATTTGTTGTTGATAGAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAAC
TTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGTTGAGGCTGAATACAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAG
ATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTGTGATAATAAAGTTGCTATTAGTATTGCTAACAACCCAGTTCAACATGATAGAACTAAACATGTTGAGATTG
ATTGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGCATTCCGTACATTCCTTCAAACCAACAGGTTGCTGATGTTCTAA
Protein sequenceShow/hide protein sequence
MGDEFEIKDLGNLKYFLRMEVTRSKEDISVSQRKYTLDLLTRTGMLGCLPADTPTKFNCKLGNSDDQAPVDKEQYQRLFMQAPNEKHMEVVNRILRYLKNTPGKGLMFRK
TNRKTIEAYTDSDLIGFVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFVIIKLLLVLLTTQFNMIELNMLRL
IGISSKKDLTVEAYAFRTFLQTNRLLMF