| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-60 | 90.91 | Show/hide |
Query: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
VYG KDLILT YTDSDFQTDRDSRKSTSG VFTLNGGAVVWRSIKQGCIAD TMEAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAVAN
Subjt: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
Query: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| KAA0058448.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 2.6e-70 | 100 | Show/hide |
Query: MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
Subjt: MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
Query: ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
Subjt: ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-60 | 90.91 | Show/hide |
Query: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
VYG KDLILT YTDSDFQTDRDSRKSTSG VFTLNGGAVVWRSIKQGCIAD TMEAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAVAN
Subjt: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
Query: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| TYK05001.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-60 | 90.91 | Show/hide |
Query: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
VYG KDLILT YTDSDFQTDRDSRKSTSG VFTLNGGAVVWRSIKQGCIAD TMEAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAVAN
Subjt: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
Query: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-60 | 90.91 | Show/hide |
Query: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
VYG KDLILT YTDSDFQTDRDSRKSTSG VFTLNGGAVVWRSIKQGCIAD TMEAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAVAN
Subjt: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
Query: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 2.6e-60 | 90.91 | Show/hide |
Query: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
VYG KDLILT YTDSDFQTDRDSRKSTSG VFTLNGGAVVWRSIKQGCIAD TMEAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAVAN
Subjt: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
Query: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| A0A5A7UKD1 Gag-pol fusion protein | 2.6e-60 | 89.55 | Show/hide |
Query: MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
M VYGFKDLILT YTDSDFQTDRDSRKST G VFTLNGGAVVWRSIKQGCIAD T+EAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAV
Subjt: MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
Query: ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
AN R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| A0A5A7UTG2 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 1.3e-70 | 100 | Show/hide |
Query: MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
Subjt: MHVYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAV
Query: ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
Subjt: ANFRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| A0A5D3CPJ6 Gag/pol protein | 2.6e-60 | 90.91 | Show/hide |
Query: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
VYG KDLILT YTDSDFQTDRDSRKSTSG VFTLNGGAVVWRSIKQGCIAD TMEAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAVAN
Subjt: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
Query: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| A0A5D3CSZ6 Gag/pol protein | 2.6e-60 | 90.91 | Show/hide |
Query: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
VYG KDLILT YTDSDFQTDRDSRKSTSG VFTLNGGAVVWRSIKQGCIAD TMEAEYVAACEAAKEA+WLR FLIDLEVV MSKPI LYCDNSGAVAN
Subjt: VYGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVAN
Query: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
R+PRSHKRGKHIE KYHLIREIVHRGDVIVT
Subjt: FRKPRSHKRGKHIECKYHLIREIVHRGDVIVT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.2e-16 | 39.47 | Show/hide |
Query: YTDSDFQTDRDSRKSTSGLVFTL-NGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANFRKPRSHKRG
Y DSD+ RKST+G +F + + + W + +Q +A + EAEY+A EA +EA+WL+ L + + L PI +Y DN G ++ P HKR
Subjt: YTDSDFQTDRDSRKSTSGLVFTL-NGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANFRKPRSHKRG
Query: KHIECKYHLIREIV
KHI+ KYH RE V
Subjt: KHIECKYHLIREIV
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| P0CV72 Secreted RxLR effector protein 161 | 1.1e-10 | 52.38 | Show/hide |
Query: LTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWL
L Y+D+D+ D +SR+STSG +F LNGG V WRS KQ +A + E EY+A EA +EA+WL
Subjt: LTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-24 | 45.53 | Show/hide |
Query: YGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANF
+G D IL YTD+D D D+RKS++G +FT +GGA+ W+S Q C+A T EAEY+AA E KE IWL++FL +L + K ++YCD+ A+
Subjt: YGFKDLILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANF
Query: RKPRSHKRGKHIECKYHLIREIV
+ H R KHI+ +YH IRE+V
Subjt: RKPRSHKRGKHIECKYHLIREIV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.0e-14 | 36.36 | Show/hide |
Query: LILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANFRKPRS
L L Y+D+D+ D+D ST+G + L + W S KQ + + EAEY + + E W+ L +L + LT +P ++YCDN GA P
Subjt: LILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANFRKPRS
Query: HKRGKHIECKYHLIREIVHRG
H R KHI YH IR V G
Subjt: HKRGKHIECKYHLIREIVHRG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.0e-13 | 36.36 | Show/hide |
Query: LILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANFRKPRS
L L Y+D+D+ D D ST+G + L + W S KQ + + EAEY + + E W+ L +L + L S P ++YCDN GA P
Subjt: LILTEYTDSDFQTDRDSRKSTSGLVFTLNGGAVVWRSIKQGCIADFTMEAEYVAACEAAKEAIWLRKFLIDLEVVLTMSKPIILYCDNSGAVANFRKPRS
Query: HKRGKHIECKYHLIREIVHRG
H R KHI YH IR V G
Subjt: HKRGKHIECKYHLIREIVHRG
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