; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0101491 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0101491
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr04:17869849..17870589
RNA-Seq ExpressionCmc04g0101491
SyntenyCmc04g0101491
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO62209.1 Zinc finger, CCHC-type [Corchorus capsularis]4.3e-9568.29Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        +TNGFKINECDKCVY K  +ND+VI+CLYVDD+ I+GS+  +IK+TK ML +KF+ KDMG+ADVILGI+I RT +G++L+QS+YV  IL+++ ++   +A
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        +TP++ SLHL KN G+ I Q+EYSRIIGSL+Y+MSCTR DIAY +SKLSR+TSNP  DHWKAI+RIL YL++T +YGLHY RYPAVLE+YSDANWIS  K
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        ++KSTSGY+FTL G  VSWKSSKQT IARSTMESEFI LDK GEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

RVW43864.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]7.3e-9569.11Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        +++GFKINECDKCVYVK  ++ +VIVCLYVDDMLI+GS   +I +TK ML ++F+ KDMG+ADVILGI+I RT   LILSQS+YV  IL K+ +++  +A
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        +TP++ +LHL KN G+S+ Q+EYSRIIGSL+Y+MSCTRPDIAYA+SKLSRYTSNPG  HW+ I+R+L YL+ T +YGLHY RYPAVLE YSDANWIS  K
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        +SKS SGY+FTLGG AVSWKSSKQT IARSTMESEFI LDK GEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

RVW64853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.3e-9569.11Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        +++GFKINECDKCVYVK  ++ +VIVCLYVDDMLI+GS   +I +TK ML ++F+ KDMG+ADVILGI+I RT   LILSQS+YV  IL K+ +++  +A
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        +TP++ +LHL KN G+S+ Q+EYSRIIGSL+Y+MSCTRPDIAYA+SKLSRYTSNPG  HW+ I+R+L YL+ T +YGLHY+RYPAVLE YSDANWIS  K
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        +SKS SGY+FTLGG AVSWKSSKQT IARSTMESEFI LDK GEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

RVW67960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.7e-9971.14Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        ++NGFKINECDKCVYVK+ Q  +VIVCLYVDDMLIIGS  N+IK TKQML+++F+ KD+G+AD+ILGI++S+T  GLILSQS+Y+  IL+K+K+  I   
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        KT ++ +LHL KN G    QLEYSRIIGSL+Y+M+CT PDIAY++SKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+ RYPAVLE YSDANWIS +K
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        +SKSTSGY+FTLGG AVSWKSSKQTCIARSTMESEFI +DKAGEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

WP_140189331.1 DDE-type integrase/transposase/recombinase [Xylella fastidiosa]3.0e-9668.7Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        +++GF+INECDKCVYVK+    +VI+CLYVDDMLI+GS+  +I++TK ML +KF+ KDMG+ADVILG++I+RT  GL LSQ++YV  IL+K+ ++   IA
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        +TP++ SLHL KN G+ + QLEYSRIIGSL+Y+MSCTRPDIAY++S+LSRYTSNPG DHWKAI+R+L YL++T + GLHY RYPAVLE Y DANWIS  K
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        +SKSTSGY+FTLGG AV+WKSSKQTCIARSTMESEFI LDKA EEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

TrEMBL top hitse value%identityAlignment
A0A2N9F5X3 Integrase catalytic domain-containing protein6.2e-10072.36Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        M+NGF+INECDKCVYVK+  + +VIVCLYVDDMLI+GS+ +IIK TK+ML +KF+ KD+G+ADVILGI+I+RT  GL+LSQS+Y+  +L+K+ R      
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        KTPI+ +LHL KN G+ I QLEYS+IIGSL+YIM+CTRPDIAY++SKLSRYTSNPG+DHWKAI+R+L YLK+T NYG+HY RYPAVLE YSDANWIS T 
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        ++KSTSGY+FTLGG AVSWKSSKQTCIARSTMESEFI LDKAGEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

A0A2N9F8T0 Integrase catalytic domain-containing protein4.8e-10071.95Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        M+NGF+INECDKCVY+K+  + +VIVCLYVDDMLI+GS+ +IIK TK+ML +KF+ KD+G+ADVILGI+I+RT  GL+LSQS+Y+  +L+K+ R      
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        KTPI+ +LHL KN G+ I QLEYS+IIGSL+YIM+CTRPDIAY++SKLSRYTSNPG+DHWKAI+R+L YLK+T NYG+HY RYPAVLE YSDANWIS T 
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        ++KSTSGY+FTLGG AVSWKSSKQTCIARSTMESEFI LDKAGEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

A0A2N9GUH4 Integrase catalytic domain-containing protein8.1e-10071.95Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        M+NGF+INECDKCVYVK+  + +VIVCLYVDDMLI+GS+ +IIK TK+ML +KF+ KD+G+ADVILGI+I+RT  GL+LSQS+Y+  +L+K+ R      
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        KTP++ +LHL KN G+ I QLEYS+IIGSL+YIM+CTRPDIAY++SKLSRYTSNPG+DHWKAI+R+L YLK+T NYG+HY RYPAVLE YSDANWIS T 
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        ++KSTSGY+FTLGG AVSWKSSKQTCIARSTMESEFI LDKAGEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

A0A2N9HDE2 Integrase catalytic domain-containing protein8.1e-10071.95Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        M+NGF+INECDKCVYVK+  + +VIVCLYVDDMLI+GS+ +IIK TK+ML +KF+ KD+G+ADVILGI+I+RT  GL+LSQS+Y+  +L+K+ R      
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        KTP++ +LHL KN G+ I QLEYS+IIGSL+YIM+CTRPDIAY++SKLSRYTSNPG+DHWKAI+R+L YLK+T NYG+HY RYPAVLE YSDANWIS T 
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        ++KSTSGY+FTLGG AVSWKSSKQTCIARSTMESEFI LDKAGEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

A0A438G6X1 Retrovirus-related Pol polyprotein from transposon TNT 1-948.1e-10071.14Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        ++NGFKINECDKCVYVK+ Q  +VIVCLYVDDMLIIGS  N+IK TKQML+++F+ KD+G+AD+ILGI++S+T  GLILSQS+Y+  IL+K+K+  I   
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        KT ++ +LHL KN G    QLEYSRIIGSL+Y+M+CT PDIAY++SKLSR+TSNPG++HWK+I+R+LGYLK+T+NYGLH+ RYPAVLE YSDANWIS +K
Subjt:  KTPIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
        +SKSTSGY+FTLGG AVSWKSSKQTCIARSTMESEFI +DKAGEEA
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.6e-3132.26Show/hide
Query:  FKINECDKCVYV--KSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIAKT
        F  +  D+C+Y+  K N N+++ V LYVDD++I    +  +   K+ L  KF   D+      +GIRI      + LSQS YV  IL K+   +     T
Subjt:  FKINECDKCVYV--KSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIAKT

Query:  PIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHY---IRYPAVLESYSDANWISGT
        P+ + ++    N D         +IG L+YIM CTRPD+  A++ LSRY+S    + W+ + R+L YLK T +  L +   + +   +  Y D++W    
Subjt:  PIEASLHLGKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHY---IRYPAVLESYSDANWISGT

Query:  KNSKSTSGYIFTL-GGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA
         + KST+GY+F +     + W + +Q  +A S+ E+E++ L +A  EA
Subjt:  KNSKSTSGYIFTL-GGGAVSWKSSKQTCIARSTMESEFITLDKAGEEA

P0CV72 Secreted RxLR effector protein 1614.4e-2643.08Show/hide
Query:  IEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRY-PAVLESYSDANWISGTKNSKSTSGYIFTLGGGA
        ++ + Y   +G+++Y+M  TRPD+A A+  LS++ S+P   HW+A+ R+L YL+ T+ YGL + R   A L  YSDA+W    ++ +STSGY+F L GG 
Subjt:  IEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRY-PAVLESYSDANWISGTKNSKSTSGYIFTLGGGA

Query:  VSWKSSKQTCIARSTMESEFITLDKAGEEA
        VSW+S KQ  +A S+ E E++ L +A +EA
Subjt:  VSWKSSKQTCIARSTMESEFITLDKAGEEA

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-4439.59Show/hide
Query:  DKCVYVKS-NQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRI--SRTPQGLILSQSYYVHTILKKYKRNHIVIAKTPIEAS
        D CVY K  ++N+ +I+ LYVDDMLI+G    +I   K  L+  F+ KD+G A  ILG++I   RT + L LSQ  Y+  +L+++   +     TP+   
Subjt:  DKCVYVKS-NQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRI--SRTPQGLILSQSYYVHTILKKYKRNHIVIAKTPIEAS

Query:  LHLGK-------NNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK
        L L K           ++ ++ YS  +GSL+Y M CTRPDIA+A+  +SR+  NPG++HW+A+  IL YL+ T    L +     +L+ Y+DA+      
Subjt:  LHLGK-------NNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTK

Query:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE
        N KS++GY+FT  GGA+SW+S  Q C+A ST E+E+I   + G+E
Subjt:  NSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.1e-3235.2Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        +T GF  +  D  ++V       V + +YVDD+LI G+   ++  T   L+ +F  KD       LGI   R P GL LSQ  Y+  +L    R +++ A
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  K---TPIEASLHLGKNNGDSI-EQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANW
        K   TP+  S  L   +G  + +  EY  I+GSL Y ++ TRPDI+YA+++LS++   P ++H +A+ RIL YL  T N+G+   +   + L +YSDA+W
Subjt:  K---TPIEASLHLGKNNGDSI-EQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANW

Query:  ISGTKNSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE
             +  ST+GYI  LG   +SW S KQ  + RS+ E+E+ ++     E
Subjt:  ISGTKNSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE29.7e-3435.6Show/hide
Query:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA
        +T GF  +  D  ++V       + + +YVDD+LI G+   ++K T   L+ +F  K+       LGI   R PQGL LSQ  Y   +L    R +++ A
Subjt:  MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIA

Query:  K---TPIEASLHLGKNNGDSI-EQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANW
        K   TP+  S  L  ++G  + +  EY  I+GSL Y ++ TRPD++YA+++LS+Y   P  DHW A+ R+L YL  T ++G+   +   + L +YSDA+W
Subjt:  K---TPIEASLHLGKNNGDSI-EQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANW

Query:  ISGTKNSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE
           T +  ST+GYI  LG   +SW S KQ  + RS+ E+E+ ++     E
Subjt:  ISGTKNSKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-2830.74Show/hide
Query:  GFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIAKTP
        GF  +  D   ++K      + V +YVDD++I  ++   +   K  L + F+ +D+G     LG+ I+R+  G+ + Q  Y   +L +        +  P
Subjt:  GFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIAKTP

Query:  IEASLHLGKNN-GDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANWISGTKN
        ++ S+    ++ GD ++   Y R+IG L+Y +  TR DI++A++KLS+++  P   H +A+++IL Y+K T   GL Y     + L+ +SDA++ S    
Subjt:  IEASLHLGKNN-GDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANWISGTKN

Query:  SKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE
         +ST+GY   LG   +SWKS KQ  +++S+ E+E+  L  A +E
Subjt:  SKSTSGYIFTLGGGAVSWKSSKQTCIARSTMESEFITLDKAGEE

ATMG00240.1 Gag-Pol-related retrotransposon family protein8.8e-0628.95Show/hide
Query:  MSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANWISGTKNSKSTSGY
        ++ TRPD+ +A+++LS+++S       +A+ ++L Y+K T   GL Y     + L++++D++W S     +S +G+
Subjt:  MSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANWISGTKNSKSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein6.5e-2530.52Show/hide
Query:  LYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIAKTPIEASLHLGKNNGDSIEQLEYSRII
        LYVDD+L+ GSS  ++      L++ F  KD+G     LGI+I   P GL LSQ+ Y   IL            TP+   L+   +     +  ++  I+
Subjt:  LYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIAKTPIEASLHLGKNNGDSIEQLEYSRII

Query:  GSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANWISGTKNSKSTSGYIFTLGGGAVSWKSSKQTC
        G+L Y ++ TRPDI+YA++ + +    P    +  + R+L Y+K T  +GL+  +   + ++++ D++W   T   +ST+G+   LG   +SW + +Q  
Subjt:  GSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAV-LESYSDANWISGTKNSKSTSGYIFTLGGGAVSWKSSKQTC

Query:  IARSTMESEFITL
        ++RS+ E+E+  L
Subjt:  IARSTMESEFITL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGTCAAAAGCAATCAAAATGACCATGTCATTGTGTGCCTATATGTTGATGATATGCTAATTATAGG
TAGCAGTATCAATATTATTAAGACAACCAAACAAATGTTGGCTAATAAATTTGAGACGAAAGACATGGGTATCGCAGATGTTATTCTAGGTATTAGAATTTCTAGAACCC
CACAAGGGTTAATATTGTCTCAATCATATTATGTTCATACAATATTGAAGAAATATAAAAGAAATCACATTGTGATTGCAAAGACCCCAATTGAAGCTAGTCTCCATTTA
GGTAAAAATAATGGAGATAGTATTGAACAATTAGAATATTCTCGCATCATTGGTAGTTTAATATACATTATGAGTTGTACACGTCCTGATATAGCGTATGCTATAAGCAA
GTTAAGTCGCTATACAAGTAATCCAGGTCAAGATCATTGGAAAGCTATCTTGAGAATTTTAGGATACTTAAAGCATACTGAAAATTATGGATTACACTATATTCGCTATC
CTGCTGTACTTGAAAGTTATAGTGATGCGAACTGGATATCGGGCACTAAAAACTCCAAATCCACAAGTGGTTACATTTTTACCCTTGGCGGTGGGGCTGTATCTTGGAAA
TCTTCCAAACAAACATGTATAGCACGATCCACAATGGAATCTGAATTTATAACTCTAGACAAGGCTGGGGAAGAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGTCAAAAGCAATCAAAATGACCATGTCATTGTGTGCCTATATGTTGATGATATGCTAATTATAGG
TAGCAGTATCAATATTATTAAGACAACCAAACAAATGTTGGCTAATAAATTTGAGACGAAAGACATGGGTATCGCAGATGTTATTCTAGGTATTAGAATTTCTAGAACCC
CACAAGGGTTAATATTGTCTCAATCATATTATGTTCATACAATATTGAAGAAATATAAAAGAAATCACATTGTGATTGCAAAGACCCCAATTGAAGCTAGTCTCCATTTA
GGTAAAAATAATGGAGATAGTATTGAACAATTAGAATATTCTCGCATCATTGGTAGTTTAATATACATTATGAGTTGTACACGTCCTGATATAGCGTATGCTATAAGCAA
GTTAAGTCGCTATACAAGTAATCCAGGTCAAGATCATTGGAAAGCTATCTTGAGAATTTTAGGATACTTAAAGCATACTGAAAATTATGGATTACACTATATTCGCTATC
CTGCTGTACTTGAAAGTTATAGTGATGCGAACTGGATATCGGGCACTAAAAACTCCAAATCCACAAGTGGTTACATTTTTACCCTTGGCGGTGGGGCTGTATCTTGGAAA
TCTTCCAAACAAACATGTATAGCACGATCCACAATGGAATCTGAATTTATAACTCTAGACAAGGCTGGGGAAGAAGCATAA
Protein sequenceShow/hide protein sequence
MTNGFKINECDKCVYVKSNQNDHVIVCLYVDDMLIIGSSINIIKTTKQMLANKFETKDMGIADVILGIRISRTPQGLILSQSYYVHTILKKYKRNHIVIAKTPIEASLHL
GKNNGDSIEQLEYSRIIGSLIYIMSCTRPDIAYAISKLSRYTSNPGQDHWKAILRILGYLKHTENYGLHYIRYPAVLESYSDANWISGTKNSKSTSGYIFTLGGGAVSWK
SSKQTCIARSTMESEFITLDKAGEEA