| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera] | 4.4e-45 | 47.96 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| RVW35654.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.4e-45 | 47.96 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| RVW62854.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 9.7e-45 | 48.47 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ Q +L+IFGC+ +PYL KNKF KTYPCV IGYN KGYRCL T ++YISRHVIF+ N P+ N +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| RVX04530.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 4.4e-45 | 47.96 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| RVX11445.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.3e-44 | 46.94 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SC T +QNG+ HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438DJK3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-45 | 47.96 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| A0A438FSB8 Retrovirus-related Pol polyprotein from transposon RE1 | 4.7e-45 | 48.47 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ Q +L+IFGC+ +PYL KNKF KTYPCV IGYN KGYRCL T ++YISRHVIF+ N P+ N +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| A0A438J6E1 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-45 | 47.96 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| A0A438JR71 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.0e-44 | 46.94 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SC T +QNG+ HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| A5BC00 Uncharacterized protein | 2.1e-45 | 47.96 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ Q ER+IK FQ++ GG+F S+K + + I Q+SCP T +QNGV HRHIVE L +LF AKLP WVD+FLTA + INR+PS+ LK++S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
F + F++ +L+IFGC+ +PYL KNKF KTYPCV IGY+ KGYRCL T ++YISRHVIF+ N P+DN +++ SF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDNKYTNHPSSCESLDITSF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.2e-17 | 29.24 | Show/hide |
Query: DTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGVH----RHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDL--KLKSH
+ F K+ + ++G ++ S +++Q + I + ++ P+T Q NGV R I E ++ AKL +W ++ LTAT+ INR+PS L K+
Subjt: DTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGVH----RHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDL--KLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFD
+E+W K+ +L++FG Y + I + KFD K++ + +GY G++ D K ++R V+ D
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFD
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.1e-26 | 34.71 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ + RK+K ++++GG++TS + ++ H I H+ + P T Q NGV +R IVE +L AKLP +W ++ TA + INR PS L +
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIF
+W KE + ++LK+FGC+ + ++ + K D K+ PC+ IGY + GYR D K+ SR V+F
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIF
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-33 | 40.22 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ +F+ +I F +++GG+F + L + +H I H S P+T + NG+ HRHIVET L LL A +P YW +F A + INR+P+ L+L+S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDN
F+ F N + L++FGC YP+L +++K D K+ CV +GY+++Q Y CL +T+++YISRHV FD N PF N
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPFDN
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.1e-29 | 37.29 | Show/hide |
Query: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
+++ +F+ +I +++GG+F + L+ +H I H S P+T + NG+ HRHIVE L LL A +P YW +F A + INR+P+ L+L+S
Subjt: MIDTQFERKIKFFQTNSGGKFTSLKLKQLTEEHEIHHQMSCPYTSQQNGV----HRHIVETCLVLLFQAKLPYKYWVDSFLTATFFINRMPSSDLKLKSH
Query: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPF
F+ F + N LK+FGC YP+L +++K + K+ C +GY+++Q Y CL T ++Y SRHV FD PF
Subjt: FEIWFQKEQNCNNLKIFGCKYYPYLIFPSKNKFDKKTYPCVLIGYNMSQKGYRCLDTKTNKIYISRHVIFDGNYLPF
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