; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0101651 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0101651
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy1-copia retrotransposon protein
Genome locationCMiso1.1chr04:18067421..18070006
RNA-Seq ExpressionCmc04g0101651
SyntenyCmc04g0101651
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR001878 - Zinc finger, CCHC-type
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR036875 - Zinc finger, CCHC-type superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036643.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]0.0e+0094.87Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSRFTKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SE VDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LI+ED KTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
        KEAIKSELDSL MNHTWEL+DLPMGNKPIRCKWIFKRKTKPNG IERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR

TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]0.0e+0095.34Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPV+EQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSRFTKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR
        KEAIKSELDSL MNHTWEL+DLPMGNKPIR
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR

TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]0.0e+0094.99Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        M D KPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSR+TKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTV
        KEAIKSELDSL MNHTWEL+DLPMGNKPIRCKWIFKRKTKPNG IERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKT 
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTV

Query:  FLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNGLK
        FLNG+LEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWY+KFNNTLITNG K
Subjt:  FLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNGLK

TYK26791.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]0.0e+0095.21Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSR+TKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR
        KEAIKSELDSL MNHTWEL+DLPMGNKPIR
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR

TYK27931.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]0.0e+0094.97Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPVVEQIHEYENLV NVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKL ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSRFTKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDSSMW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIF
        KEAIKSELDSL MNHTWEL+DLPMGNKPIRCK  F
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIF

TrEMBL top hitse value%identityAlignment
A0A5A7T166 Ty1-copia retrotransposon protein0.0e+0094.87Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSRFTKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SE VDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LI+ED KTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
        KEAIKSELDSL MNHTWEL+DLPMGNKPIRCKWIFKRKTKPNG IERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR

A0A5D3BZI1 Ty1-copia retrotransposon protein0.0e+0095.34Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPV+EQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSRFTKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR
        KEAIKSELDSL MNHTWEL+DLPMGNKPIR
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR

A0A5D3C5T2 Ty1-copia retrotransposon protein0.0e+0094.99Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        M D KPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSR+TKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTV
        KEAIKSELDSL MNHTWEL+DLPMGNKPIRCKWIFKRKTKPNG IERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKT 
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTV

Query:  FLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNGLK
        FLNG+LEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWY+KFNNTLITNG K
Subjt:  FLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNGLK

A0A5D3DSQ3 Ty1-copia retrotransposon protein0.0e+0095.21Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSR+TKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR
        KEAIKSELDSL MNHTWEL+DLPMGNKPIR
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIR

A0A5D3DWC4 Ty1-copia retrotransposon protein0.0e+0094.97Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        MTD KPVVEQIHEYENLV NVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKL ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH
        DRTKQEKGHKGKNS+KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNH

Query:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI
        ELL+DYEDT DGECVFMGNSATA VIGK KVILKLTS KTLSLSNVLYVPSLRRNLVSGSLLNR  LKIVLEGDKVVLTKNGDFV KGYLSNGLFVLNTI
Subjt:  ELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTI

Query:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF
        SMNAN SSSAYLIESANLWHGRLGHVNFASIRKLK++RLINTSE+HETGKC ICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT SRGGKNYYVSF
Subjt:  SMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSF

Query:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
        VDDYSRFTKIYLI+TKNEAVSMF+KFKAESENQLGKRIKRLRSD+GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS
Subjt:  VDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLS

Query:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
        DNMWGEAVLSACFILNRIP+KRLDK PYEL KGHAPNLSYLKVWGCLAKVP PALKKTTVG KTFDCIFIGYAQNSAAYRFMCLN+KTINESRDAEFFEH
Subjt:  DNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW
        VFPLKQSLYAPSLSNRMHDPEIVSE P SETVDTPNLSCELE RRSKRQRTEKSFGP FLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDSSMW
Subjt:  VFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMW

Query:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIF
        KEAIKSELDSL MNHTWEL+DLPMGNKPIRCK  F
Subjt:  KEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIF

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.0e-8226.35Show/hide
Query:  VVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQE
        ++   H ++ L++ +L+ G K+ E+ + + LL   P  ++     ++   ++      + +   ++  ++K+     + N  +  ++ +   N + T + 
Subjt:  VVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQE

Query:  KGHKGKNSK-KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC------NQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN
           K + +K K+ FK       K K+ C+ CG+EGH    C         K + ++K   Q   +   + ++  +   ++++N   ++LD+GAS H   +
Subjt:  KGHKGKNSK-KRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC------NQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  HELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGY-LSNGLFVLN
          L  D  + V    + +       +   ++ I++L +   ++L +VL+      NL+S   L    + I  +   V ++KNG  V K   + N + V+N
Subjt:  HELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGY-LSNGLFVLN

Query:  TISMNANVSSSAYLIESANLWHGRLGHVNFASIRKLK------NLRLINTSESHETGKCPICIESKFHKKPFKPVEYRT--TELLELIHSDLADFRTTTS
          + + N         +  LWH R GH++   + ++K      +  L+N  E      C  C+  K  + PFK ++ +T     L ++HSD+    T  +
Subjt:  TISMNANVSSSAYLIESANLWHGRLGHVNFASIRKLK------NLRLINTSESHETGKCPICIESKFHKKPFKPVEYRT--TELLELIHSDLADFRTTTS

Query:  RGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMM
           KNY+V FVD ++ +   YLIK K++  SMF  F A+SE     ++  L  D G EY    +++FC   GI +  T P++PQ NG++ER  RT+ E  
Subjt:  RGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMM

Query:  NAMLLSSGLSDNMWGEAVLSACFILNRIPYKRL---DKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQ-------------
          M+  + L  + WGEAVL+A +++NRIP + L    K PYE+     P L +L+V+G    V     K+     K+F  IF+GY               
Subjt:  NAMLLSSGLSDNMWGEAVLSACFILNRIPYKRL---DKIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQ-------------

Query:  --------------NSAAYRFMCLNNKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCEL----------ELRRSKRQR
                      NS A +F  +  K   ES +  F      + Q+ + P+ S    + + + ++  SE  + PN S ++          E    +  +
Subjt:  --------------NSAAYRFMCLNNKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCEL----------ELRRSKRQR

Query:  TEKSFGPYFLSTF---------------------------------------------IVERRDE----------------IDCNFTNLYLIDED-PKTY
          K    YFL+                                               I+ RR E                ++    N + I  D P ++
Subjt:  TEKSFGPYFLSTF---------------------------------------------IVERRDE----------------IDCNFTNLYLIDED-PKTY

Query:  QEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIH
         E     D S W+EAI +EL++  +N+TW +   P     +  +W+F  K    G+  RYKARLV  G+TQK  +DY +T++PV +I++ R +++L   +
Subjt:  QEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIH

Query:  NLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTL
        NL +HQMDVKT FLNG L+EEIYM  P+G  IS   + VCKL K++YGLKQA + W++ F   L
Subjt:  NLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-12733.33Show/hide
Query:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR
        M++G   +  ++ +  L+  + + G+K+ E  +A +LL   P S+++    + H K  ++L+++ S      A  L +K+  +  N   A + E    + 
Subjt:  MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNR

Query:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC-NQRKGR----PSQKPTPQANLAEQDSEIIAAIVE----ANLIENKTDWILDTG
         R+    G  G   K +       + K +   CY C + GH    C N RKG+      +     A + + +  ++  I E     +L   +++W++DT 
Subjt:  DRTKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC-NQRKGR----PSQKPTPQANLAEQDSEIIAAIVE----ANLIENKTDWILDTG

Query:  ASRHFCTNHELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLS
        AS H     +L   Y    D   V MGN++ +++ G   + +K     TL L +V +VP LR NL+SG  L+R   +      K  LTK    + KG   
Subjt:  ASRHFCTNHELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLS

Query:  NGLFVLNTISMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSR
          L+  N       ++++   I S +LWH R+GH++   ++ L    LI+ ++      C  C+  K H+  F+    R   +L+L++SD+       S 
Subjt:  NGLFVLNTISMNANVSSSAYLIESANLWHGRLGHVNFASIRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSR

Query:  GGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMN
        GG  Y+V+F+DD SR   +Y++KTK++   +F KF A  E + G+++KRLRSD GGEY+ +  +E+C S+GI HE T P +PQ NG+AER NRT+ E + 
Subjt:  GGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMN

Query:  AMLLSSGLSDNMWGEAVLSACFILNRIPYKRLD-KIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTIN
        +ML  + L  + WGEAV +AC+++NR P   L  +IP  +      + S+LKV+GC A    P  ++T +  K+  CIFIGY      YR      K + 
Subjt:  AMLLSSGLSDNMWGEAVLSACFILNRIPYKRLD-KIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTIN

Query:  ESRDAEFFEHVFP-------------LKQSLYAPSLSNRMHDPEIVS-------ETPGS------------ETVDTPNLSCELE--LRRSKRQRTEKSFG
         SRD  F E                 +   +  PS SN     E  +       E PG             E V+ P    E    LRRS+R R E    
Subjt:  ESRDAEFFEHVFP-------------LKQSLYAPSLSNRMHDPEIVS-------ETPGS------------ETVDTPNLSCELE--LRRSKRQRTEKSFG

Query:  PYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVG
        P   ST  V   D            D +P++ +E L+  + +   +A++ E++SL  N T++L++LP G +P++CKW+FK K   +  + RYKARLVV G
Subjt:  PYFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVG

Query:  YTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNN
        + QK+G+D+ + +SPV K+T+IR +++LAA  +L + Q+DVKT FL+GDLEEEIYM QPEGF+++G+++ VCKL KSLYGLKQAP+QWY KF++
Subjt:  YTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNN

Q12491 Transposon Ty2-B Gag-Pol polyprotein4.3e-2027.97Show/hide
Query:  TSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVL---TKNGDF--VDKGYL---SNGLFVLNTISMNANVSSSAYLIESANLWHGRLGHVN
        TS+K L   N+ Y       L + ++        +   D  VL    K+GDF  + K YL         +N ++ + +V+   Y      L H  LGH N
Subjt:  TSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVL---TKNGDF--VDKGYL---SNGLFVLNTISMNANVSSSAYLIESANLWHGRLGHVN

Query:  FASIRK-LKNLRLINTSESH------ETGKCPICIESKF----HKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
        F SI+K LK   +    ES        T +CP C+  K     H K  +     + E  + +H+D+        +   +Y++SF D+ +RF  +Y +  +
Subjt:  FASIRK-LKNLRLINTSESH------ETGKCPICIESKF----HKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK

Query:  NE--AVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFI
         E   +++F    A  +NQ   R+  ++ D+G EY++KTL +F  + GI   +T     + +G+AER NRTL      +L  SGL +++W  AV  +  I
Subjt:  NE--AVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFI

Query:  LNRIPYKRLDK
         N +   + DK
Subjt:  LNRIPYKRLDK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.0e-7826.14Show/hide
Query:  GKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWND-YRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDR
        GKP ++   + E ++ N+  E   + + + A    +  PP+  + +   L H+ K L +        T  A   ++   + N N+ N N   + + NR+ 
Subjt:  GKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWND-YRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDR

Query:  TKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG-----RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFC
            K  +  ++    F     Q K     C +CG +GH + +C+Q +         Q P+P      + +  + +   +N      +W+LD+GA+ H  
Subjt:  TKQEKGHKGKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG-----RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFC

Query:  TNHELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLL---NRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGL
        ++   L  ++    G+ V + + +T  +       L  T  + L+L N+LYVP++ +NL+S   L   N V ++      +V     G  + +G   + L
Subjt:  TNHELLYDYEDTVDGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLL---NRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGL

Query:  F-----VLNTISMNANVSSSAYLIESANLWHGRLGHVNFASIRK-LKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT
        +         +S+ A+ SS A    + + WH RLGH   + +   + N  L   + SH+   C  C+ +K +K PF      +T  LE I+SD+      
Subjt:  F-----VLNTISMNANVSSSAYLIESANLWHGRLGHVNFASIRK-LKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTT

Query:  TSRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKE
         S     YYV FVD ++R+T +Y +K K++    F+ FK   EN+   RI    SD GGE+    L E+   +GI H  + P++P+ NG++ERK+R + E
Subjt:  TSRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKE

Query:  MMNAMLLSSGLSDNMWGEAVLSACFILNRIPYKRLD-KIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNK
            +L  + +    W  A   A +++NR+P   L  + P++   G +PN   L+V+GC          +  +  K+  C+F+GY+   +AY  + L   
Subjt:  MMNAMLLSSGLSDNMWGEAVLSACFILNRIPYKRLD-KIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNK

Query:  TINESRDAEFFEHVFPLKQSLY------------------------------APSLSNRMH----------------------DPEIVSETPGS------
         +  SR   F E+ FP    L                               APS S+  H                      D    S  P S      
Subjt:  TINESRDAEFFEHVFPLKQSLY------------------------------APSLSNRMH----------------------DPEIVSETPGS------

Query:  ----------------ETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTF------------------------------IVERRDEIDCNFTNL-----
                        +T  + N S       S  Q  +    P   S+                               IV   ++   N  ++     
Subjt:  ----------------ETVDTPNLSCELELRRSKRQRTEKSFGPYFLSTF------------------------------IVERRDEIDCNFTNL-----

Query:  -YLIDEDPK-----------TYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDY
          +I  +PK             + A+ ++    W+ A+ SE+++ + NHTW+L+  P  +  I  C+WIF +K   +GS+ RYKARLV  GY Q+ G+DY
Subjt:  -YLIDEDPK-----------TYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDY

Query:  FDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNG
         +T+SPV K T+IR ++ +A   +  I Q+DV   FL G L +++YM+QP GF    + N VCKLRK+LYGLKQAP+ WY +  N L+T G
Subjt:  FDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE29.2e-7925.58Show/hide
Query:  QANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKG----HKGKNSKKRQFKTTGG----
        Q   +LE  P  +    + +  K     L E+   +   E+  L   L S  +  + AN+V     N +R +  +G    +   N++   ++ +      
Subjt:  QANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKG----HKGKNSKKRQFKTTGG----

Query:  ---QIKKKKLVCYVCGKEGHKSYQC-----------NQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNHELLYDYEDTV
           Q K     C +C  +GH + +C            Q+   P     P+ANLA             N   N  +W+LD+GA+ H  ++   L  ++   
Subjt:  ---QIKKKKLVCYVCGKEGHKSYQC-----------NQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNHELLYDYEDTV

Query:  DGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLL---NRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLF-----VLNTISM
         G+ V + + +T  +       L  TS ++L L+ VLYVP++ +NL+S   L   NRV ++      +V     G  + +G   + L+         +SM
Subjt:  DGECVFMGNSATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLL---NRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLF-----VLNTISM

Query:  NANVSSSAYLIESANLWHGRLGHVNFASIRK-LKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSFV
         A+  S A    + + WH RLGH + A +   + N  L   + SH+   C  C  +K HK PF      +++ LE I+SD+       S     YYV FV
Subjt:  NANVSSSAYLIESANLWHGRLGHVNFASIRK-LKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSFV

Query:  DDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSD
        D ++R+T +Y +K K++    F+ FK+  EN+   RI  L SD GGE+    L+++   +GI H  + P++P+ NG++ERK+R + EM   +L  + +  
Subjt:  DDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKRLRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFILNRIPYKRLD-KIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH
          W  A   A +++NR+P   L  + P++   G  PN   LKV+GC          +  +  K+  C F+GY+   +AY  + +    +  SR  +F E 
Subjt:  NMWGEAVLSACFILNRIPYKRLD-KIPYELRKGHAPNLSYLKVWGCLAKVPFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEH

Query:  VFPL--------------------------------------------------------------------KQSLYAPSLSNR----------------
         FP                                                                       S+ +PS S                  
Subjt:  VFPL--------------------------------------------------------------------KQSLYAPSLSNR----------------

Query:  ----------MHDPEIVSETPGSET--------------VDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVE--------------------RRDEID
                  +++P   S +P S                + TP+ S       S    +     P   +  I++                    R+    
Subjt:  ----------MHDPEIVSETPGSET--------------VDTPNLSCELELRRSKRQRTEKSFGPYFLSTFIVE--------------------RRDEID

Query:  CNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSP
         ++      + +P+T   A+ ++    W++A+ SE+++ + NHTW+L+  P  +  I  C+WIF +K   +GS+ RYKARLV  GY Q+ G+DY +T+SP
Subjt:  CNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSP

Query:  VTKITTIRALIALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNG
        V K T+IR ++ +A   +  I Q+DV   FL G L +E+YM+QP GF    + + VC+LRK++YGLKQAP+ WY +    L+T G
Subjt:  VTKITTIRALIALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.1e-4547.75Show/hide
Query:  EDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALI
        ++P TY EA   +   +W  A+  E+ ++   HTWE+  LP   KPI CKW++K K   +G+IERYKARLV  GYTQ++G+D+ +T+SPV K+T+++ ++
Subjt:  EDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALI

Query:  ALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNG
        A++AI+N  +HQ+D+   FLNGDL+EEIYM  P G+      S   N VC L+KS+YGLKQA +QW+ KF+ TLI  G
Subjt:  ALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNG

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)3.0e-1639.05Show/hide
Query:  IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA
        I ++PK+   AL       W +A++ ELD+L  N TW L+  P+    + CKW+FK K   +G+++R KARLV  G+ Q++G+ + +TYSPV +  TIR 
Subjt:  IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA

Query:  LIALA
        ++ +A
Subjt:  LIALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGACGGCAAGCCAGTCGTGGAACAAATACATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAAATGTCTT
GTTGGAAAAATTTCCTCCATCCTGGAATGACTACCGTAATCATCTCAAGCACAAGAAGAAGGATCTAAAGCTCCAGGAACTCATCAGTCATATGCGCACGGAAGAAGCCA
ACAGACTGAAAGATAAGTTAGCCTCCCAAAATTTAAATTCAGTTAATGCTAACTTAGTCGAATCATCCTTTGTAAACAGAGACAGAACGAAGCAGGAAAAAGGGCATAAA
GGGAAAAACTCAAAGAAGAGACAGTTCAAGACTACTGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGCTACGTGTGCGGAAAGGAAGGGCACAAATCATACCAATGCAA
CCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAACAAGACAGTGAGATCATAGCAGCCATAGTAGAGGCCAATCTGATAGAAAACAAGA
CGGACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCATGAACTTCTCTATGACTACGAAGACACTGTCGATGGAGAATGTGTGTTCATGGGAAACTCA
GCCACTGCAGAAGTAATCGGGAAAGAGAAGGTTATTTTAAAGTTAACTTCTGTAAAAACTTTATCTTTAAGTAATGTTCTATATGTTCCTTCCCTACGTAGGAACCTGGT
GTCTGGGAGTCTGTTGAATCGGGTCAGGCTTAAAATTGTGCTAGAAGGTGACAAAGTTGTCCTCACTAAAAATGGAGATTTTGTCGATAAGGGGTATCTGTCTAATGGTC
TATTTGTGTTAAACACGATTTCTATGAATGCAAATGTTTCCAGTTCTGCTTACTTGATTGAATCTGCTAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCA
ATTAGAAAACTTAAAAACTTGAGACTCATTAATACTTCTGAGTCGCATGAAACTGGTAAATGCCCCATCTGCATAGAAAGTAAATTCCATAAGAAGCCTTTCAAACCAGT
TGAATATAGAACTACTGAGCTGTTAGAATTAATTCACTCGGATCTAGCCGACTTTAGAACCACGACTAGTAGAGGTGGTAAAAACTACTATGTATCCTTTGTTGATGATT
ACTCTAGATTCACTAAGATATACCTGATAAAAACAAAAAATGAAGCTGTCAGTATGTTCTTAAAATTCAAGGCAGAATCTGAGAATCAGTTAGGAAAAAGGATAAAAAGA
TTAAGATCAGATAAAGGTGGTGAGTATTCCGATAAAACGCTTAAAGAATTTTGTGAATCAAATGGTATCATCCATGAATTTACTGCTCCTTACTCACCACAACAAAATGG
CATAGCAGAACGAAAAAATAGAACTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCCGGCCTATCTGATAATATGTGGGGGGAAGCCGTGTTGTCTGCATGTTTTA
TTCTTAACAGGATTCCCTACAAAAGGCTAGACAAAATTCCATACGAACTTCGGAAAGGACATGCACCAAATCTTTCCTACCTAAAGGTCTGGGGATGCTTGGCTAAGGTA
CCATTTCCTGCATTGAAGAAAACTACGGTAGGATCTAAAACCTTTGACTGCATTTTTATCGGGTATGCTCAAAATAGTGCTGCATATAGGTTTATGTGTTTAAATAACAA
AACTATAAACGAATCTAGAGATGCAGAATTTTTTGAGCATGTTTTTCCGTTAAAACAATCATTGTATGCTCCTAGCCTATCTAACAGAATGCATGATCCTGAAATCGTTA
GTGAAACACCTGGTTCTGAAACTGTTGATACTCCAAACCTAAGTTGTGAATTAGAACTTAGGAGAAGTAAAAGACAGAGAACTGAGAAAAGTTTCGGTCCATATTTCCTA
AGCACCTTCATAGTGGAAAGGCGTGATGAAATTGACTGTAACTTCACAAACTTGTACTTAATAGATGAGGATCCTAAAACTTACCAAGAAGCGCTAAACTCAGTAGATTC
AAGTATGTGGAAAGAAGCCATTAAAAGTGAATTGGACTCACTGGTCATGAATCATACATGGGAACTGATGGATCTTCCTATGGGAAACAAGCCAATTAGATGTAAGTGGA
TCTTTAAAAGAAAAACAAAACCAAATGGATCAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGATATACCCAGAAACAAGGTGTTGACTATTTTGACACATATTCC
CCTGTAACTAAGATAACCACAATTAGGGCCTTGATTGCTTTGGCCGCAATACATAACCTTCTTATTCACCAAATGGACGTAAAAACAGTCTTTTTAAATGGTGACTTAGA
AGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAGTCCCTATACGGTCTCAAGCAAGCTCCCAAACAGT
GGTACAAAAAATTTAACAATACGTTGATAACCAATGGATTAAAAAAAATCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGACGGCAAGCCAGTCGTGGAACAAATACATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAAATGTCTT
GTTGGAAAAATTTCCTCCATCCTGGAATGACTACCGTAATCATCTCAAGCACAAGAAGAAGGATCTAAAGCTCCAGGAACTCATCAGTCATATGCGCACGGAAGAAGCCA
ACAGACTGAAAGATAAGTTAGCCTCCCAAAATTTAAATTCAGTTAATGCTAACTTAGTCGAATCATCCTTTGTAAACAGAGACAGAACGAAGCAGGAAAAAGGGCATAAA
GGGAAAAACTCAAAGAAGAGACAGTTCAAGACTACTGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGCTACGTGTGCGGAAAGGAAGGGCACAAATCATACCAATGCAA
CCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAACAAGACAGTGAGATCATAGCAGCCATAGTAGAGGCCAATCTGATAGAAAACAAGA
CGGACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCATGAACTTCTCTATGACTACGAAGACACTGTCGATGGAGAATGTGTGTTCATGGGAAACTCA
GCCACTGCAGAAGTAATCGGGAAAGAGAAGGTTATTTTAAAGTTAACTTCTGTAAAAACTTTATCTTTAAGTAATGTTCTATATGTTCCTTCCCTACGTAGGAACCTGGT
GTCTGGGAGTCTGTTGAATCGGGTCAGGCTTAAAATTGTGCTAGAAGGTGACAAAGTTGTCCTCACTAAAAATGGAGATTTTGTCGATAAGGGGTATCTGTCTAATGGTC
TATTTGTGTTAAACACGATTTCTATGAATGCAAATGTTTCCAGTTCTGCTTACTTGATTGAATCTGCTAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCA
ATTAGAAAACTTAAAAACTTGAGACTCATTAATACTTCTGAGTCGCATGAAACTGGTAAATGCCCCATCTGCATAGAAAGTAAATTCCATAAGAAGCCTTTCAAACCAGT
TGAATATAGAACTACTGAGCTGTTAGAATTAATTCACTCGGATCTAGCCGACTTTAGAACCACGACTAGTAGAGGTGGTAAAAACTACTATGTATCCTTTGTTGATGATT
ACTCTAGATTCACTAAGATATACCTGATAAAAACAAAAAATGAAGCTGTCAGTATGTTCTTAAAATTCAAGGCAGAATCTGAGAATCAGTTAGGAAAAAGGATAAAAAGA
TTAAGATCAGATAAAGGTGGTGAGTATTCCGATAAAACGCTTAAAGAATTTTGTGAATCAAATGGTATCATCCATGAATTTACTGCTCCTTACTCACCACAACAAAATGG
CATAGCAGAACGAAAAAATAGAACTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCCGGCCTATCTGATAATATGTGGGGGGAAGCCGTGTTGTCTGCATGTTTTA
TTCTTAACAGGATTCCCTACAAAAGGCTAGACAAAATTCCATACGAACTTCGGAAAGGACATGCACCAAATCTTTCCTACCTAAAGGTCTGGGGATGCTTGGCTAAGGTA
CCATTTCCTGCATTGAAGAAAACTACGGTAGGATCTAAAACCTTTGACTGCATTTTTATCGGGTATGCTCAAAATAGTGCTGCATATAGGTTTATGTGTTTAAATAACAA
AACTATAAACGAATCTAGAGATGCAGAATTTTTTGAGCATGTTTTTCCGTTAAAACAATCATTGTATGCTCCTAGCCTATCTAACAGAATGCATGATCCTGAAATCGTTA
GTGAAACACCTGGTTCTGAAACTGTTGATACTCCAAACCTAAGTTGTGAATTAGAACTTAGGAGAAGTAAAAGACAGAGAACTGAGAAAAGTTTCGGTCCATATTTCCTA
AGCACCTTCATAGTGGAAAGGCGTGATGAAATTGACTGTAACTTCACAAACTTGTACTTAATAGATGAGGATCCTAAAACTTACCAAGAAGCGCTAAACTCAGTAGATTC
AAGTATGTGGAAAGAAGCCATTAAAAGTGAATTGGACTCACTGGTCATGAATCATACATGGGAACTGATGGATCTTCCTATGGGAAACAAGCCAATTAGATGTAAGTGGA
TCTTTAAAAGAAAAACAAAACCAAATGGATCAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGATATACCCAGAAACAAGGTGTTGACTATTTTGACACATATTCC
CCTGTAACTAAGATAACCACAATTAGGGCCTTGATTGCTTTGGCCGCAATACATAACCTTCTTATTCACCAAATGGACGTAAAAACAGTCTTTTTAAATGGTGACTTAGA
AGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAGTCCCTATACGGTCTCAAGCAAGCTCCCAAACAGT
GGTACAAAAAATTTAACAATACGTTGATAACCAATGGATTAAAAAAAATCCTCTAA
Protein sequenceShow/hide protein sequence
MTDGKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGHK
GKNSKKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNHELLYDYEDTVDGECVFMGNS
ATAEVIGKEKVILKLTSVKTLSLSNVLYVPSLRRNLVSGSLLNRVRLKIVLEGDKVVLTKNGDFVDKGYLSNGLFVLNTISMNANVSSSAYLIESANLWHGRLGHVNFAS
IRKLKNLRLINTSESHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFLKFKAESENQLGKRIKR
LRSDKGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPYKRLDKIPYELRKGHAPNLSYLKVWGCLAKV
PFPALKKTTVGSKTFDCIFIGYAQNSAAYRFMCLNNKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSETPGSETVDTPNLSCELELRRSKRQRTEKSFGPYFL
STFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELMDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGVDYFDTYS
PVTKITTIRALIALAAIHNLLIHQMDVKTVFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYKKFNNTLITNGLKKIL