| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037369.1 pol protein [Cucumis melo var. makuwa] | 1.3e-111 | 90.67 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQR+WLELVKDYDCEILY+PGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHS ALITKQ PLL+DFERAEIAVS+GEVT+QLAQLSVQPTLRQ+II AQLNDPYLVEK +VETGQ EDFSISSDD L FEGRLCVPEDSA+KT+ LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGST MYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| KAA0050011.1 pol protein [Cucumis melo var. makuwa] | 4.2e-113 | 92.44 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQG+VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQR+WLELVKDYDCE+LY+PGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHS ALITKQAPLLRDFERAEIAVS+GEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEK LVETGQ EDFSISSDD LTFEGRLCVP+DSA+KT+ LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
E HSSPFTMHPGST MYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| KAA0058528.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 3.3e-118 | 96.89 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILY+PGK NVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHSVALITKQAPLLRDFERAEIA+SLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEK PLVETG+ EDFSISSDDALTFEGRLCVPEDSAVKTK LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGSTMMYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| KAA0063098.1 pol protein [Cucumis melo var. makuwa] | 1.7e-111 | 90.67 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQR+WLELVKDYDCEILY+PGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHS ALITKQ PLLRDFERAEI VS+GEVT+QLAQLSVQPTLRQ+II AQLNDPYL EK +VETGQ EDFSISSDD L FEGRLCVPEDSAVKT+ LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGST MYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| TYK07218.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 3.3e-118 | 96.89 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILY+PGK NVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHSVALITKQAPLLRDFERAEIA+SLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEK PLVETG+ EDFSISSDDALTFEGRLCVPEDSAVKTK LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGSTMMYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T7M0 Reverse transcriptase | 6.5e-112 | 90.67 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQR+WLELVKDYDCEILY+PGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHS ALITKQ PLL+DFERAEIAVS+GEVT+QLAQLSVQPTLRQ+II AQLNDPYLVEK +VETGQ EDFSISSDD L FEGRLCVPEDSA+KT+ LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGST MYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| A0A5A7U8T4 Pol protein | 2.0e-113 | 92.44 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQG+VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQR+WLELVKDYDCE+LY+PGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHS ALITKQAPLLRDFERAEIAVS+GEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEK LVETGQ EDFSISSDD LTFEGRLCVP+DSA+KT+ LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
E HSSPFTMHPGST MYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| A0A5A7UTP4 Reverse transcriptase | 1.6e-118 | 96.89 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILY+PGK NVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHSVALITKQAPLLRDFERAEIA+SLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEK PLVETG+ EDFSISSDDALTFEGRLCVPEDSAVKTK LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGSTMMYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| A0A5A7V646 Reverse transcriptase | 8.5e-112 | 90.67 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQR+WLELVKDYDCEILY+PGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHS ALITKQ PLLRDFERAEI VS+GEVT+QLAQLSVQPTLRQ+II AQLNDPYL EK +VETGQ EDFSISSDD L FEGRLCVPEDSAVKT+ LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGST MYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| A0A5D3C7T1 Reverse transcriptase | 1.6e-118 | 96.89 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILY+PGK NVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Query: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
VAHSVALITKQAPLLRDFERAEIA+SLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEK PLVETG+ EDFSISSDDALTFEGRLCVPEDSAVKTK LT
Subjt: VAHSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLT
Query: EAHSSPFTMHPGSTMMYQDLRSVYW
EAHSSPFTMHPGSTMMYQDLRSVYW
Subjt: EAHSSPFTMHPGSTMMYQDLRSVYW
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.9e-16 | 42.86 | Show/hide |
Query: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSR
Q G ++Y SR L HE NY T + EL A+V+A K +RHYL G +I +DH+ L + + K+ N + +W + ++D +I Y GK N VADALSR
Subjt: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSR
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| P0CT41 Transposon Tf2-12 polyprotein | 5.4e-15 | 25.7 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRKWLELVKDYDCEILYNPGKANVVADALSRKVA
V Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T + N R +W ++D++ EI Y PG AN +ADALSR
Subjt: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRKWLELVKDYDCEILYNPGKANVVADALSRKVA
Query: HSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLTEA
++ + P+ +D E I + + Q+S+ + +++ ND L+ + E+ + + + ++ +P D+ + + +
Subjt: HSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLTEA
Query: HSSPFTMHPGSTMM
H +HPG ++
Subjt: HSSPFTMHPGSTMM
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 4.9e-16 | 41 | Show/hide |
Query: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
Q+G+ + SR LK EQNY T++ EL A+V+AL +++LYG + I IFTDH+ L + + N + ++W + ++ ++ Y PGK N VADALSR+
Subjt: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSRK
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 3.4e-17 | 42.55 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSR
+AY SR L E+NY T + E+ A++++L R YLYG I+++TDH+ L + + N + ++W +++Y+CE++Y PGK+NVVADALSR
Subjt: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRKWLELVKDYDCEILYNPGKANVVADALSR
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| Q9UR07 Transposon Tf2-11 polyprotein | 5.4e-15 | 25.7 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRKWLELVKDYDCEILYNPGKANVVADALSRKVA
V Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T + N R +W ++D++ EI Y PG AN +ADALSR
Subjt: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRKWLELVKDYDCEILYNPGKANVVADALSRKVA
Query: HSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLTEA
++ + P+ +D E I + + Q+S+ + +++ ND L+ + E+ + + + ++ +P D+ + + +
Subjt: HSVALITKQAPLLRDFERAEIAVSLGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKHPLVETGQCEDFSISSDDALTFEGRLCVPEDSAVKTKFLTEA
Query: HSSPFTMHPGSTMM
H +HPG ++
Subjt: HSSPFTMHPGSTMM
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