CuGenDBv2

Gene ID	Cmc04g0102081
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Genome location	CMiso1.1chr04:18697271..18697894
RNA-Seq Expression	Cmc04g0102081
Synteny	Cmc04g0102081
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0016310 - phosphorylation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016301 - kinase activity (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041408.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]

9.5e-104

91.37

Show/hide

Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCTAYVHNFGPNQTKFTP+AQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENRPYF VSHLQ E++SEESNS FEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPA VQDFEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

KAA0061456.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.5e-104

91.37

Show/hide

Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCTAYVHNFGPNQTKFTP+AQACVFVGYPLHQ GYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENRPYF VSHLQGE++SEESNSTFEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPA VQ+FEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

KAA0063166.1 Beta-galactosidase [Cucumis melo var. makuwa]

3.6e-103

90.86

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Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCT YVHNFGPNQTKFTP+AQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENR YF VSHLQ E++SEESNSTFEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPA VQDFEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

KAA0067540.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.2e-103

90.36

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Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCTAYVHNFGPNQTKFTP+AQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENRPYF VSHLQGE++SEESNSTFEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRK+V SPTSQPPA +Q+FEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

TYK07164.1 reverse transcriptase [Cucumis melo var. makuwa]

1.1e-115

99.5

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Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGMETLQ
        KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPASVQDFEPPRDQGMETLQ
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGMETLQ

Query:  NL
        NL
Subjt:  NL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEQ1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

4.6e-104

91.37

Show/hide

Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCTAYVHNFGPNQTKFTP+AQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENRPYF VSHLQ E++SEESNS FEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPA VQDFEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

A0A5A7V4Q4 Beta-galactosidase

7.1e-105

91.37

Show/hide

Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCTAYVHNFGPNQTKFTP+AQACVFVGYPLHQ GYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENRPYF VSHLQGE++SEESNSTFEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPA VQ+FEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

A0A5A7V9P8 Beta-galactosidase

1.7e-103

90.86

Show/hide

Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCT YVHNFGPNQTKFTP+AQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENR YF VSHLQ E++SEESNSTFEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPA VQDFEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

A0A5A7VK49 Beta-galactosidase

6.0e-104

90.36

Show/hide

Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGD I TAAHLINRM S I+HLQTPLDCLKESYP+TRLVSEVPLRVFGCTAYVHNFGPNQTKFTP+AQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME
        KYFVTMDVTFCENRPYF VSHLQGE++SEESNSTFEF+EPTP TVSD+DPHPIILPTNQVPWKTYY RNLRK+V SPTSQPPA +Q+FEPPRDQGME
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGME

A0A5D3C7E4 Reverse transcriptase

5.2e-116

99.5

Show/hide

Query:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
        MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR
Subjt:  MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGMETLQ
        KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYY RNLRKEVGSPTSQPPASVQDFEPPRDQGMETLQ
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGMETLQ

Query:  NL
        NL
Subjt:  NL

SwissProt top hits

e value

%identity

Alignment

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

2.8e-10

29.38

Show/hide

Query:  SLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSRKYFV
        S+P   W      A +LINR+ + ++ L++P   L  + P     +   LRVFGC  Y      NQ K   +++ CVF+GY L Q  Y C H  + + ++
Subjt:  SLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSRKYFV

Query:  TMDVTFCENRPYFS-----VSHLQGESMSEES-----NSTFEFIEPTPSTVSDVDPHPIILPTN--QVPWKT--YYGRNLRKEVGS--PTS-QPPASVQD
        +  V F EN   FS     +S +Q E   E S     ++T     P     S  DPH    P +    P++       NL     S  P+S +P A  Q+
Subjt:  TMDVTFCENRPYFS-----VSHLQGESMSEES-----NSTFEFIEPTPSTVSDVDPHPIILPTN--QVPWKT--YYGRNLRKEVGS--PTS-QPPASVQD

Query:  FEPPRDQGMET
           P  Q  +T
Subjt:  FEPPRDQGMET

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

5.7e-11

30.26

Show/hide

Query:  SLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSRKYFV
        S+P   W      A +LINR+ + ++ LQ+P   L    P     +   L+VFGC  Y      N+ K   +++ C F+GY L Q  Y C H P+ + + 
Subjt:  SLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSRKYFV

Query:  TMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILP
        +  V F E    FS ++  G S S+E  S      P+ +T+      P++LP
Subjt:  TMDVTFCENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILP

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCTTTCCACTTCCCTTCCATCGTACCTGTGGGGAGATGTTATTCCTACAGCCGCTCACTTAATCAATAGAATGTCTTCTCATATCATCCACCTTCAGACTCCCTTAGA
TTGTCTTAAGGAGTCTTACCCCGCTACTCGTCTTGTTTCTGAGGTTCCTCTTCGTGTGTTTGGGTGTACCGCTTATGTCCATAATTTTGGCCCTAATCAGACCAAATTTA
CCCCTCAGGCTCAGGCTTGTGTGTTTGTTGGGTATCCCCTTCACCAGCGTGGTTATAAATGTTTTCACCCGCCGTCCAGAAAATACTTTGTCACTATGGATGTTACTTTC
TGTGAGAACCGACCCTACTTTTCTGTTAGCCATCTTCAGGGGGAGAGTATGAGTGAAGAGTCTAACAGCACCTTTGAATTTATTGAACCTACTCCTAGTACCGTATCTGA
TGTTGATCCTCATCCCATAATCCTACCCACGAACCAAGTTCCCTGGAAAACATATTACGGGAGGAATCTCAGAAAGGAAGTTGGGTCCCCTACTAGTCAACCGCCGGCTT
CAGTCCAAGATTTCGAACCTCCTCGAGACCAAGGAATGGAAACCCTACAGAACCTTGTACTAATAATACGATGA

mRNA sequence

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Protein sequence

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MLSTSLPSYLWGDVIPTAAHLINRMSSHIIHLQTPLDCLKESYPATRLVSEVPLRVFGCTAYVHNFGPNQTKFTPQAQACVFVGYPLHQRGYKCFHPPSRKYFVTMDVTF
CENRPYFSVSHLQGESMSEESNSTFEFIEPTPSTVSDVDPHPIILPTNQVPWKTYYGRNLRKEVGSPTSQPPASVQDFEPPRDQGMETLQNLVLIIR

Cmc04g0102081 (gene) of Melon (Charmono) v1.1 genome