| GenBank top hits | e value | %identity | Alignment |
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| KAA0040942.1 pol protein [Cucumis melo var. makuwa] | 2.0e-77 | 79.06 | Show/hide |
Query: MSFGLTNAPTVFMDLMN----------------------------REHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMN EHLHQVLETLRAN+LYAKFFKCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMN----------------------------REHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| KAA0054634.1 pol protein [Cucumis melo var. makuwa] | 1.2e-77 | 79.58 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| KAA0058812.1 pol protein [Cucumis melo var. makuwa] | 1.2e-77 | 79.58 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| KAA0063098.1 pol protein [Cucumis melo var. makuwa] | 2.7e-77 | 79.06 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| KAA0066951.1 pol protein [Cucumis melo var. makuwa] | 1.2e-77 | 79.58 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7TBV4 Pol protein | 9.9e-78 | 79.06 | Show/hide |
Query: MSFGLTNAPTVFMDLMN----------------------------REHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMN EHLHQVLETLRAN+LYAKFFKCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMN----------------------------REHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| A0A5A7UHL7 Reverse transcriptase | 5.8e-78 | 79.58 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| A0A5A7USG7 Reverse transcriptase | 5.8e-78 | 79.58 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| A0A5A7V646 Reverse transcriptase | 1.3e-77 | 79.06 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| A0A5A7VMR4 Reverse transcriptase | 5.8e-78 | 79.58 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
MSFGLTNAP VFMDLMNR EHLHQVLETLRAN+LYAKF KCEFWL+KV+FLGHVVSSEGV VDPAKIEAV NW
Subjt: MSFGLTNAPTVFMDLMNR----------------------------EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAP+LTVPDGSG+FVIYSDAS K LGCVLM
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVLM
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.2e-26 | 36.65 | Show/hide |
Query: MSFGLTNAPTVFMDLMN-------------------------REHLHQ---VLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
M FGL NAP F MN EHL V E L L + KCEF ++ +FLGHV++ +G+ +P KIEA+ +
Subjt: MSFGLTNAPTVFMDLMN-------------------------REHLHQ---VLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVL
P P+ EI++FLGL GYYR+F+ +F+ IA P+T+ +K +P +S+F++LK + PIL VPD + F + +DAS LG VL
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVL
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 3.3e-22 | 34.03 | Show/hide |
Query: EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWS
++L +V R L KC F++ +V+FLGH + +G+ D K + + N+P P R F+ YYRRF+++F+ + +T+L +K PF W+
Subjt: EHLHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWS
Query: PACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVL
C+ +F LK +L+ +L PD S F I +DAS + G VL
Subjt: PACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.1e-24 | 35.08 | Show/hide |
Query: MSFGLTNAPTVFMDLMNR-------------------------EHLHQ---VLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
M FGL NAP F MN EHL+ V L L + KCEF K+ +FLGH+V+ +G+ +P K++A+ ++
Subjt: MSFGLTNAPTVFMDLMNR-------------------------EHLHQ---VLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVL
P P+ EIR+FLGL GYYR+F+ +++ IA P+T +K T +F++LK ++ PIL +PD FV+ +DAS LG VL
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCVL
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| P92523 Uncharacterized mitochondrial protein AtMg00860 | 3.2e-25 | 41.98 | Show/hide |
Query: HLHQVLETLRANRLYAKFFKCEFWLKKVSFLG--HVVSSEGVFVDPAKIEAVNNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
HL VL+ ++ YA KC F ++++LG H++S EGV DPAK+EA+ WP P +E+R FLGL GYYRRFV+++ +I PLT+L +K + W
Subjt: HLHQVLETLRANRLYAKFFKCEFWLKKVSFLG--HVVSSEGVFVDPAKIEAVNNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
Query: SPACESSFQELKQKLVTAPILTVPDGSGSFV
+ +F+ LK + T P+L +PD FV
Subjt: SPACESSFQELKQKLVTAPILTVPDGSGSFV
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 7.4e-22 | 30.85 | Show/hide |
Query: MSFGLTNAPTVFMDLMN---REH-------------------------LHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
+ FGL NAP +F +++ REH L VL +L L K F +V FLG++V+++G+ DP K+ A++
Subjt: MSFGLTNAPTVFMDLMN---REH-------------------------LHQVLETLRANRLYAKFFKCEFWLKKVSFLGHVVSSEGVFVDPAKIEAVNNW
Query: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR-----------KGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCV
P P++V E++ FLG+ YYR+F++D++++A PLT LTR P SF +LK L ++ IL P + F + +DAS +G V
Subjt: PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR-----------KGTPFVWSPACESSFQELKQKLVTAPILTVPDGSGSFVIYSDASIKRLGCV
Query: L
L
Subjt: L
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