; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0102201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0102201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:18923554..18924561
RNA-Seq ExpressionCmc04g0102201
SyntenyCmc04g0102201
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000502 - proteasome complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR041588 - Integrase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR012337 - Ribonuclease H-like superfamily
IPR001584 - Integrase, catalytic core


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025848.1 pol protein [Cucumis melo var. makuwa]7.9e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

KAA0031437.1 pol protein [Cucumis melo var. makuwa]7.9e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

KAA0033825.1 pol protein [Cucumis melo var. makuwa]7.9e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

TYK28368.1 pol protein [Cucumis melo var. makuwa]7.9e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

TYK28422.1 pol protein [Cucumis melo var. makuwa]7.9e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

TrEMBL top hitse value%identityAlignment
A0A5A7TEQ2 Reverse transcriptase3.8e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

A0A5A7TSL0 Reverse transcriptase3.8e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

A0A5A7U2S5 Pol protein3.8e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

A0A5A7UBS1 Reverse transcriptase3.8e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

A0A5D3CQB5 Reverse transcriptase3.8e-17799.04Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV ET
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAET

Query:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
        EQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK
Subjt:  EQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
        WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD
Subjt:  WESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD

Query:  GQTERLNQILED
        GQTERLNQILED
Subjt:  GQTERLNQILED

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.5e-4031.65Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR
        R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +R
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR

Query:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS
        V E  Q  +G  I+S      + ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+ 
Subjt:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS

Query:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF
             WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  +
Subjt:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF

Query:  HPQTDGQTERLNQILE
         PQTDGQTER NQ +E
Subjt:  HPQTDGQTERLNQILE

P0CT35 Transposon Tf2-2 polyprotein1.5e-4031.65Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR
        R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +R
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR

Query:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS
        V E  Q  +G  I+S      + ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+ 
Subjt:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS

Query:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF
             WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  +
Subjt:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF

Query:  HPQTDGQTERLNQILE
         PQTDGQTER NQ +E
Subjt:  HPQTDGQTERLNQILE

P0CT36 Transposon Tf2-3 polyprotein1.5e-4031.65Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR
        R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +R
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR

Query:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS
        V E  Q  +G  I+S      + ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+ 
Subjt:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS

Query:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF
             WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  +
Subjt:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF

Query:  HPQTDGQTERLNQILE
         PQTDGQTER NQ +E
Subjt:  HPQTDGQTERLNQILE

P0CT41 Transposon Tf2-12 polyprotein1.5e-4031.65Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR
        R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +R
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR

Query:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS
        V E  Q  +G  I+S      + ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+ 
Subjt:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS

Query:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF
             WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  +
Subjt:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF

Query:  HPQTDGQTERLNQILE
         PQTDGQTER NQ +E
Subjt:  HPQTDGQTERLNQILE

Q9UR07 Transposon Tf2-11 polyprotein1.5e-4031.65Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR
        R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +R
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRR

Query:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS
        V E  Q  +G  I+S      + ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+ 
Subjt:  VAETEQ-GEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLS

Query:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF
             WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  +
Subjt:  VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAF

Query:  HPQTDGQTERLNQILE
         PQTDGQTER NQ +E
Subjt:  HPQTDGQTERLNQILE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGATGCGCTGAGTAGGAAAGTTGCACA
TTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCGGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTAGCTCAGTTGACAGTTC
AGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTACTTGGCAGAGAAGCGTCGCGTGGCAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCT
GACGGTGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAG
TACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTA
GGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACG
GTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAG
ACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACAAGGTTGGACTTCAGCACGG
CATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCT
GATGGAGTTTGCCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGATGCGCTGAGTAGGAAAGTTGCACA
TTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCGGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTAGCTCAGTTGACAGTTC
AGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTACTTGGCAGAGAAGCGTCGCGTGGCAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCT
GACGGTGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAG
TACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTA
GGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACG
GTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAG
ACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACAAGGTTGGACTTCAGCACGG
CATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCT
GATGGAGTTTGCCTATAA
Protein sequenceShow/hide protein sequence
MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAETEQGEGFSISS
DGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYT
VIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDAASLRTRVFRKLGLPSAS
DGVCL