| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025466.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.3e-176 | 79.05 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGYDTEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| TYK26360.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SI12 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-176 | 79.05 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGYDTEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| A0A5D3DT06 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-175 | 78.8 | Show/hide |
Query: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
MTS+YSLMNT SP SLP I AAD NCMNITH+GT NTPSLNLPHTYC TIGTGRKVGRLFELL
Subjt: MTSNYSLMNTLSPANSLPSICAADNNCMNITHIGTNNTPSLNLPHTYC-------------------------------------TIGTGRKVGRLFELL
Query: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
SLQVP P SIS VTDSDTYQWHL LGHAS +KLR+LISIN+LN++TKFVPFNCLNCKLAKQ ALSFS STSICDKPFDLIHSDIW APT+ VHG+RYY
Subjt: SLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYY
Query: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
VLFIDDFSRFTW YFLKHRSELSRTYIEFA MI TQFSCPIKTL TDNALEYKDSTLLSFLSQQGTLVQRSCPHTS QN RAE KHRHILDSVRALLL+A
Subjt: VLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTA
Query: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
SCPEKFWG+AALTSVYTIN PSS+LQNISPFERLYGT PNYSNLKVF C CFVLL PHEHTKLEP A LCCFLGY TEHKGFRCWD LSNRL ISRHVT
Subjt: SCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVT
Query: F
F
Subjt: F
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.6e-27 | 27.53 | Show/hide |
Query: WHLCLGHASLKKL-----RYLISINSLNNVTKFVPFNCLNCKLAKQSALSFS--PSTSICDKPFDLIHSDIWALAPTTIVHGFRYYVLFIDDFSRFTWTY
WH GH S KL + + S SL N + C C KQ+ L F + +P ++HSD+ + Y+V+F+D F+ + TY
Subjt: WHLCLGHASLKKL-----RYLISINSLNNVTKFVPFNCLNCKLAKQSALSFS--PSTSICDKPFDLIHSDIWALAPTTIVHGFRYYVLFIDDFSRFTWTY
Query: FLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTASCPEKFWGKAALTS
+K++S++ + +F F+ + L+ DN EY + + F ++G + PHT N +E R I + R ++ A + FWG+A LT+
Subjt: FLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTASCPEKFWGKAALTS
Query: VYTINSFPSSILQNIS--PFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHV
Y IN PS L + S P+E + P +L+VF +V + ++ K + + F+GY E GF+ WD ++ + ++R V
Subjt: VYTINSFPSSILQNIS--PFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-35 | 31.79 | Show/hide |
Query: WHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYYVLFIDDFSRFTWTYFLKHRSE
WH +GH S K L+ L + ++ C C KQ +SF S+ DL++SD+ + G +Y+V FIDD SR W Y LK + +
Subjt: WHLCLGHASLKKLRYLISINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYYVLFIDDFSRFTWTYFLKHRSE
Query: LSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTASCPEKFWGKAALTSVYTINSF
+ + + +F ++ + +K L +DN EY + S G +++ P T N AE +R I++ VR++L A P+ FWG+A T+ Y IN
Subjt: LSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTASCPEKFWGKAALTSVYTINSF
Query: PSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVTF
PS L P +YS+LKVF C F + + TKL+ + C F+GY E G+R WD + ++ SR V F
Subjt: PSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVTF
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 7.5e-06 | 33.73 | Show/hide |
Query: HRHILDSVRALLLTASCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNA
+R I++ VR++L P+ F AA T+V+ IN +PS+ + P E + ++P YS L+ F CV ++ + KL+P A
Subjt: HRHILDSVRALLLTASCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-53 | 36.51 | Show/hide |
Query: GRKVGRLFELLSLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLI---SINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIW
G+ L+E P S ++ + + WH LGH + L +I S++ LN KF+ +C +C + K + + FS ST +P + I+SD+W
Subjt: GRKVGRLFELLSLQVPPPSSISTLVTDSDTYQWHLCLGHASLKKLRYLI---SINSLNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIW
Query: ALAPTTIVHGFRYYVLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKH
+ +P +RYYV+F+D F+R+TW Y LK +S++ T+I F ++ +F I T ++DN E+ L + SQ G S PHT N +E KH
Subjt: ALAPTTIVHGFRYYVLFIDDFSRFTWTYFLKHRSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKH
Query: RHILDSVRALLLTASCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCW
RHI+++ LL AS P+ +W A +VY IN P+ +LQ SPF++L+GT PNY L+VF C C+ L P+ KL+ + C FLGY + C
Subjt: RHILDSVRALLLTASCPEKFWGKAALTSVYTINSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCW
Query: DLLSNRLCISRHVTF
L ++RL ISRHV F
Subjt: DLLSNRLCISRHVTF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-52 | 39.93 | Show/hide |
Query: WHLCLGHASLKKLRYLISINS---LNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYYVLFIDDFSRFTWTYFLKH
WH LGH SL L +IS +S LN K + +C +C + K + FS ST KP + I+SD+W+ +P + +RYYV+F+D F+R+TW Y LK
Subjt: WHLCLGHASLKKLRYLISINS---LNNVTKFVPFNCLNCKLAKQSALSFSPSTSICDKPFDLIHSDIWALAPTTIVHGFRYYVLFIDDFSRFTWTYFLKH
Query: RSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTASCPEKFWGKAALTSVYTI
+S++ T+I F ++ +F I TL++DN E+ L +LSQ G S PHT N +E KHRHI++ LL AS P+ +W A +VY I
Subjt: RSELSRTYIEFAKMIHTQFSCPIKTLFTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSPQNRRAESKHRHILDSVRALLLTASCPEKFWGKAALTSVYTI
Query: NSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVTF
N P+ +LQ SPF++L+G PNY LKVF C C+ L P+ KLE + C F+GY + C + + RL SRHV F
Subjt: NSFPSSILQNISPFERLYGTLPNYSNLKVFSCVCFVLLHPHEHTKLEPNACLCCFLGYDTEHKGFRCWDLLSNRLCISRHVTF
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