; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0102321 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0102321
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:19079325..19080503
RNA-Seq ExpressionCmc04g0102321
SyntenyCmc04g0102321
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR021109 - Aspartic peptidase domain superfamily
IPR032567 - LDOC1-related
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]2.1e-20892.86Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPL S ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQ+KK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]2.1e-20892.86Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPL S ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQ+KK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]2.1e-20892.86Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPL S ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQ+KK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]3.7e-21093.62Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITEAEAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPLNS ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQKKK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

TYK19888.1 uncharacterized protein E5676_scaffold1267G00080 [Cucumis melo var. makuwa]7.0e-225100Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase9.9e-20992.86Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPL S ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQ+KK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

A0A5D3BRZ6 Reverse transcriptase9.9e-20992.86Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPL S ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQ+KK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

A0A5D3C4R1 Reverse transcriptase9.9e-20992.86Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPL S ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQ+KK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

A0A5D3C9P8 Reverse transcriptase1.8e-21093.62Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITEAEAKRLNLRWEKDAGRMK VNSAA PIIGLV+RTMIRLGGWSGLVDFVVVKMDDFDVVLGME LLEHQVI MPLAKCLVI GPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQL KGLSR+EPTFM IPLNS ENSGETV KEI+R+LEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLN GFIRPAKAPYGAPVLFQKKK GSLRLCIDYR LNKLTVRNKYPLP ITDLFDRLHGAKYFSKLDLRSGYYQVRIA+GDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        G FEFL+MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM++HRDHLQKVFQKLKENQ YVKREKCSFAQERINFL HVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

A0A5D3D8J7 Reverse transcriptase domain-containing protein3.4e-225100Show/hide
Query:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
        MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV
Subjt:  MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSV

Query:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
        VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELA

Query:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
        ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY
Subjt:  ELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRY

Query:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
        GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG
Subjt:  GTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.5e-4034.68Show/hide
Query:  EIIRMLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYHMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L  G IR +KA    PV+F  KK G+LR+ +DY+ L
Subjt:  EIIRMLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYHMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVL

Query:  NKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP I  L  ++ G+  F+KLDL+S Y+ +R+  GDE K       G FE+L+MP+G++ APA F   +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLS-HVIECG
        S +  +H  H++ V QKLK     + + KC F Q ++ F+  H+ E G
Subjt:  STTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLS-HVIECG

P0CT41 Transposon Tf2-12 polyprotein8.5e-4034.68Show/hide
Query:  EIIRMLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYHMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L  G IR +KA    PV+F  KK G+LR+ +DY+ L
Subjt:  EIIRMLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYHMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVL

Query:  NKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP I  L  ++ G+  F+KLDL+S Y+ +R+  GDE K       G FE+L+MP+G++ APA F   +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLS-HVIECG
        S +  +H  H++ V QKLK     + + KC F Q ++ F+  H+ E G
Subjt:  STTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLS-HVIECG

P31843 RNA-directed DNA polymerase homolog9.4e-4769.53Show/hide
Query:  SLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKF
        SLR+CIDYR L K+T++NKYP+P + DLFDRL  A +F+KLDLRSGY+QVRIA GDEPKTTCVTRYG+FEF +MPFGLTNA ATFC LMN V +EYLD F
Subjt:  SLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKF

Query:  VVVYLDDIVV---YSTTMDKHRDHLQKV
        VVVYLDD+VV   YS ++ +H  HL+ V
Subjt:  VVVYLDDIVV---YSTTMDKHRDHLQKV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.0e-4935.69Show/hide
Query:  SVVQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAY
        S+++ D +  + +  I +++ N     N+ TF  +P               + + +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y
Subjt:  SVVQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAY

Query:  HMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEP
        H+      E+ K + +LL+  FI P+K+P  +PV+   KK G+ RLC+DYR LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  
Subjt:  HMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEP

Query:  KTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVI
        KT  VT  G +E+ +MPFGL NAP+TF   M   F +   +FV VYLDDI+++S + ++H  HL  V ++LK     VK++KC FA E   FL + I
Subjt:  KTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVI

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.0e-4935.69Show/hide
Query:  SVVQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAY
        S+++ D +  + +  I +++ N     N+ TF  +P               + + +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y
Subjt:  SVVQTDLRQPDGLKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAY

Query:  HMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEP
        H+      E+ K + +LL+  FI P+K+P  +PV+   KK G+ RLC+DYR LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  
Subjt:  HMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEP

Query:  KTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVI
        KT  VT  G +E+ +MPFGL NAP+TF   M   F +   +FV VYLDDI+++S + ++H  HL  V ++LK     VK++KC FA E   FL + I
Subjt:  KTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACTCTGGTGCCACCCACAATTTCATAACAGAAGCAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGTCGTGAATTCTGCTGC
CCGACCTATCATCGGACTAGTGCAACGAACGATGATAAGATTAGGAGGATGGAGTGGTCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTACTGGGAA
TGGAGGTCCTACTCGAACATCAGGTAATCCTAATGCCTTTGGCCAAATGCTTGGTGATCATTGGACCTACACCCTCGGTTGTACAGACTGACCTACGTCAGCCAGATGGG
TTAAAAATGATCTCGGCCATGCAATTAAATAAGGGTCTCTCTCGGAACGAACCAACATTTATGGTCATCCCACTCAATTCGTTAGAGAACTCAGGGGAGACAGTCTCTAA
GGAGATCATACGCATGCTAGAGAAGTACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGG
CAAAACCGCCTGCGAAGAATGCTTATCATATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGTAGGGTTCATTAGGCCTGCAAAAGCT
CCGTATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAATATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCTCACGGTTCGCAACAAGTATCCACTTCC
CACAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGATACTACCAAGTGAGAATTGCAGATGGAGATGAGCCGAAGA
CAACCTGTGTCACCCGATATGGTACATTCGAATTCCTCATAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATAT
CTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGATAAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCA
ACCGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGAGCCATGTGATAGAGTGTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACTCTGGTGCCACCCACAATTTCATAACAGAAGCAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGTCGTGAATTCTGCTGC
CCGACCTATCATCGGACTAGTGCAACGAACGATGATAAGATTAGGAGGATGGAGTGGTCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTACTGGGAA
TGGAGGTCCTACTCGAACATCAGGTAATCCTAATGCCTTTGGCCAAATGCTTGGTGATCATTGGACCTACACCCTCGGTTGTACAGACTGACCTACGTCAGCCAGATGGG
TTAAAAATGATCTCGGCCATGCAATTAAATAAGGGTCTCTCTCGGAACGAACCAACATTTATGGTCATCCCACTCAATTCGTTAGAGAACTCAGGGGAGACAGTCTCTAA
GGAGATCATACGCATGCTAGAGAAGTACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGG
CAAAACCGCCTGCGAAGAATGCTTATCATATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGTAGGGTTCATTAGGCCTGCAAAAGCT
CCGTATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAATATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCTCACGGTTCGCAACAAGTATCCACTTCC
CACAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGATACTACCAAGTGAGAATTGCAGATGGAGATGAGCCGAAGA
CAACCTGTGTCACCCGATATGGTACATTCGAATTCCTCATAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATAT
CTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGATAAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCA
ACCGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGAGCCATGTGATAGAGTGTGGCTGA
Protein sequenceShow/hide protein sequence
MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAARPIIGLVQRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEVLLEHQVILMPLAKCLVIIGPTPSVVQTDLRQPDG
LKMISAMQLNKGLSRNEPTFMVIPLNSLENSGETVSKEIIRMLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYHMAPPELAELRKQLDELLNVGFIRPAKA
PYGAPVLFQKKKYGSLRLCIDYRVLNKLTVRNKYPLPTITDLFDRLHGAKYFSKLDLRSGYYQVRIADGDEPKTTCVTRYGTFEFLIMPFGLTNAPATFCTLMNQVFHEY
LDKFVVVYLDDIVVYSTTMDKHRDHLQKVFQKLKENQPYVKREKCSFAQERINFLSHVIECG