| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.4e-88 | 83.16 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MY NSV TLVD P+ V+PIGCKWIYKRKRDQAGKVQT KARLVAKGYTQKEG+DYEETFS VAM+KSIR+LLS ATFY+YEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
YMVQPE FI QEQKVCKLQKSIYGLKQASRSWNI FDTAIKSYGFEQNVDEPCVYK+I+ ++VAFL+LYVDDILLIGND +L D+K+WL QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-86 | 82.14 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MY NSV LVD P V+PIGCKWIYKRKRD AGKVQT KARLVAKGYTQ+EG+DYEETFS VAM+KSIR+LLS ATFYDYEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
+M QPE FI GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+QNVDEPCVYK+I K VAFLVLYVDDILLIGND G+L D+K WLA QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-91 | 86.73 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MYSNSV TLVDQPN +RPIGCKWIYKRKRDQ KVQT +ARLVAKGYTQKEGIDYEETFS +AMIKSIR+LLS ATFYDYEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
YMVQPE FI GQEQKVCKLQKSIYGLKQASRSWNI FDT IKSYGFEQNVDEPCVYKRII + VAFLVLYVDDILLIGN+ HL DIKEWL QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-90 | 87.76 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MYSNSV TLVDQPN V+PIGCKWIYKRKRDQAGKVQT KARLVAKGYTQKEGIDYEE F S AMIKSIR+LLS ATFYDYEIWQMDVKT FLN NLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
YMVQPERFI GQEQK+CKLQKSIYGLKQASRS NI FDTAIKSYG EQNVDEPCVYKRI+ + VAFLVLYVDDILLIGND GHL DIK+WLAMQF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-86 | 82.14 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MY NSV LVD P V+PIGCKWIYKRKRD AGKVQT KARLVAKGYTQ+EG+DYEETFS VAM+KSIR+LLS ATFYDYEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
+M QPE FI GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+QNVDEPCVYK+I K VAFLVLYVDDILLIGND G+L D+K WLA QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 5.0e-92 | 86.73 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MYSNSV TLVDQPN +RPIGCKWIYKRKRDQ KVQT +ARLVAKGYTQKEGIDYEETFS +AMIKSIR+LLS ATFYDYEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
YMVQPE FI GQEQKVCKLQKSIYGLKQASRSWNI FDT IKSYGFEQNVDEPCVYKRII + VAFLVLYVDDILLIGN+ HL DIKEWL QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| A0A5A7TZD0 Gag/pol protein | 1.8e-86 | 82.14 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MY NSV LVD P V+PIGCKWIYKRKRD AGKVQT KARLVAKGYTQ+EG+DYEETFS VAM+KSIR+LLS ATFYDYEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
+M QPE FI GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+QNVDEPCVYK+I K VAFLVLYVDDILLIGND G+L D+K WLA QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| A0A5D3BX45 Gag/pol protein | 5.5e-91 | 87.76 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MYSNSV TLVDQPN V+PIGCKWIYKRKRDQAGKVQT KARLVAKGYTQKEGIDYEE F S AMIKSIR+LLS ATFYDYEIWQMDVKT FLN NLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
YMVQPERFI GQEQK+CKLQKSIYGLKQASRS NI FDTAIKSYG EQNVDEPCVYKRI+ + VAFLVLYVDDILLIGND GHL DIK+WLAMQF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| A0A5D3CYF4 Gag/pol protein | 1.8e-86 | 82.14 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MY NSV LVD P V+PIGCKWIYKRKRD AGKVQT KARLVAKGYTQ+EG+DYEETFS VAM+KSIR+LLS ATFYDYEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
+M QPE FI GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+QNVDEPCVYK+I K VAFLVLYVDDILLIGND G+L D+K WLA QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| E2GK51 Gag/pol protein (Fragment) | 6.7e-89 | 83.16 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
MY NSV TLVD P+ V+PIGCKWIYKRKRDQAGKVQT KARLVAKGYTQKEG+DYEETFS VAM+KSIR+LLS ATFY+YEIWQMDVKT FLNGNLEESI
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
YMVQPE FI QEQKVCKLQKSIYGLKQASRSWNI FDTAIKSYGFEQNVDEPCVYK+I+ ++VAFL+LYVDDILLIGND +L D+K+WL QF
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.6e-33 | 40.31 | Show/hide |
Query: NSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESIYMV
N+ T+ +P + +W++ K ++ G KARLVA+G+TQK IDYEETF+ VA I S R +LS Y+ ++ QMDVKT FLNG L+E IYM
Subjt: NSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESIYMV
Query: QPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVY---KRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
P+ N VCKL K+IYGLKQA+R W +F+ A+K F + + C+Y K I + +++LYVDD+++ D + + K +L +F
Subjt: QPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVY---KRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-45 | 47.21 | Show/hide |
Query: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
+ N LV+ P RP+ CKW++K K+D K+ KARLV KG+ QK+GID++E FS V + SIR +LS A D E+ Q+DVKT FL+G+LEE I
Subjt: MYSNSVSTLVDQPNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESI
Query: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVY-KRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
YM QPE F G++ VCKL KS+YGLKQA R W + FD+ +KS + + +PCVY KR + L+LYVDD+L++G D G + +K L+ F
Subjt: YMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVY-KRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.3e-09 | 36.56 | Show/hide |
Query: MDVKTIFLNGNLEESIYMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILL
MDV T FLN ++E IY+ QP F+ V +L +YGLKQA WN + +K GF ++ E +Y R ++ +YVDD+L+
Subjt: MDVKTIFLNGNLEESIYMVQPERFIPNGQEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.6e-34 | 39.67 | Show/hide |
Query: PNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESIYMVQPERFIPNG
P++V +GC+WI+ +K + G + KARLVAKGY Q+ G+DY ETFS V SIR++L A + I Q+DV FL G L + +YM QP FI
Subjt: PNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESIYMVQPERFIPNG
Query: QEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
+ VCKL+K++YGLKQA R+W + + + GF +V + ++ + ++++YVDDIL+ GND L + + L+ +F
Subjt: QEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-33 | 39.67 | Show/hide |
Query: PNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESIYMVQPERFIPNG
P V +GC+WI+ +K + G + KARLVAKGY Q+ G+DY ETFS V SIR++L A + I Q+DV FL G L + +YM QP F+
Subjt: PNYVRPIGCKWIYKRKRDQAGKVQTSKARLVAKGYTQKEGIDYEETFSSVAMIKSIRMLLSFATFYDYEIWQMDVKTIFLNGNLEESIYMVQPERFIPNG
Query: QEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
+ VC+L+K+IYGLKQA R+W + T + + GF ++ + ++ + ++++YVDDIL+ GNDT L + L+ +F
Subjt: QEQKVCKLQKSIYGLKQASRSWNIMFDTAIKSYGFEQNVDEPCVYKRIIKTIVAFLVLYVDDILLIGNDTGHLIDIKEWLAMQF
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