; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0102871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0102871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionChromo domain-containing protein
Genome locationCMiso1.1chr04:19794200..19798984
RNA-Seq ExpressionCmc04g0102871
SyntenyCmc04g0102871
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068129.1 uncharacterized protein E6C27_scaffold238G00910 [Cucumis melo var. makuwa]1.8e-1558.89Show/hide
Query:  ARIRPSSARAGAMPCAPACPSCARAVPRAPACVACARAHAMPGPRALGCRSCVRGLQRLCHDPCVTLLIFLGPLDCVGLGWLLLGNAKEP
        AR+  +S R   +P         R   + P       A A+     LGCRSCVRGLQRLCHDPCVTLLIFLGPLDCVGLGWLLLGNAKEP
Subjt:  ARIRPSSARAGAMPCAPACPSCARAVPRAPACVACARAHAMPGPRALGCRSCVRGLQRLCHDPCVTLLIFLGPLDCVGLGWLLLGNAKEP
TrEMBL top hitse value%identityAlignment
A0A5A7VST8 Chromo domain-containing protein8.7e-1658.89Show/hide
Query:  ARIRPSSARAGAMPCAPACPSCARAVPRAPACVACARAHAMPGPRALGCRSCVRGLQRLCHDPCVTLLIFLGPLDCVGLGWLLLGNAKEP
        AR+  +S R   +P         R   + P       A A+     LGCRSCVRGLQRLCHDPCVTLLIFLGPLDCVGLGWLLLGNAKEP
Subjt:  ARIRPSSARAGAMPCAPACPSCARAVPRAPACVACARAHAMPGPRALGCRSCVRGLQRLCHDPCVTLLIFLGPLDCVGLGWLLLGNAKEP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGCTGTCTGTTGCGCGCGCGCGGATGCCGCGCGCATCCGCCCATCTTCCGCGCGCGCGGGCGCGATGCCGTGCGCGCCCGCCTGCCCATCGTGCGCGCGCGCTGT
GCCGCGCGCGCCTGCCTGTGTCGCGTGCGCGCGCGCCCATGCCATGCCAGGGCCGCGTGCGCTTGGCTGCCGCTCGTGCGTCCGTGGGCTCCAACGGCTGTGTCATGACC
CTTGCGTGACTTTGCTTATTTTCTTAGGGCCTTTGGACTGTGTGGGACTTGGTTGGCTCCTCTTGGGCAATGCTAAGGAGCCTTAA
mRNA sequenceShow/hide mRNA sequence
AGTGTCACGTGGTTATTTTTAACACTTAACCAACGTGCGGCACAATGGTGATTTAGACACCAATGTAAGCCTTAGAGTTTGTTAAGAGACTTGCTAGAAATAGAGAGAGG
CTTTAAAGAAGGGAAAAGTAGGCAAAGCGTAGAGAAAGATTGAGAAAATTGAGAATACAAGTGTATTGCTTGAGTATGCTTGAGGAATTCTTGATTTCCTTGGATGCTTT
ACAAATGAGACCCCTTAGGGGTATTTATAGTATTTACATAACCGACCTAGGCCCTTAAAACCGACTTAAAAGGTCGGCAAAGTCGTTCTAGAGCATTCTGGGCTTTCCAT
GACAGTCAGCCACCGACATAGCACTGTTCCTGACCGACATAGAAGGTTCCAGAGGCGTCTGGGCGTGTCTGGAGGGGCCTGGAGCGCGCGCGCGGGTCGCCGTTACGTCC
GTCAGGCGCGCACGCGTTCCGCTGGTCACTGTGCTTGACGTCCGTCATCGAAAGTTCCAGAAATCTCCAGAGGCGTCTCGGGTCTTCTCGGCGCGCGCCGTCGGGCGCGC
GCGCGTCTGCCATGCGCGCTGTCTGTTGCGCGCGCGCGGATGCCGCGCGCATCCGCCCATCTTCCGCGCGCGCGGGCGCGATGCCGTGCGCGCCCGCCTGCCCATCGTGC
GCGCGCGCTGTGCCGCGCGCGCCTGCCTGTGTCGCGTGCGCGCGCGCCCATGCCATGCCAGGGCCGCGTGCGCTTGGCTGCCGCTCGTGCGTCCGTGGGCTCCAACGGCT
GTGTCATGACCCTTGCGTGACTTTGCTTATTTTCTTAGGGCCTTTGGACTGTGTGGGACTTGGTTGGCTCCTCTTGGGCAATGCTAAGGAGCCTTAATTTCGAAAAATTT
TGGGGGTCTATTTTTGGGGCGTGACACCCTCCCCCACTTGATTTCGCAACGTCCCCGTTGCGCTTTCTTTGAACTTTTCTATTTCTGCTTGGAATTGCCAAAGCATATCT
TCGCGTTCCCAACTGGCTTCAGACTCTGGCAACCCTTCCCACAGAATTAGATATTCCGAGTGGCTTGGAACTCCTCTTCTTCTTATCTTCCTCTCGGCTAAGATCTCTTT
GATCTTCCTGTCAAACTCGGTTATTACTCCTGTTGGTGCTCGAGAGGTTTTGCTTCTGTTCGGATCCTCCCGGTCTTCGTGAAAAGGTTTTAACATACTTACATGGAAGA
CATTATGGATCTTCAATTTTGGAGGTAGTTCCACCTTATATGCCGCTTTACCCACTCTCTCAATGATTGAGAATGGGCCTTCATATCGCCTCACAAGTCCCTTGTGGACT
TTTCGAAGGGACTTGAATTGGTTTGGTAGTAGTTTTACCAAAACCTTGTCGCCGATTTCGTATTCTTTTGGCCTTCTCTTTTTGTCGGCCCATTTCTTCATTCGTCGGGC
CGCTTTTTCGAGACATGCCCTCGATATATCCTGCTCTTCGTGCCATTGTTTTGCGAAATTGAATGCAGAAGGATTAGGTCCTTCGTATGGAACAATCAAAGTACCAGGTG
TATTGGGCTGTTGGTTCATGATTATCTCGAATGGGCTCTTGCCTGTTGACTCACTTCGTTGGAGGTTGTAGGAGAATTGGGCTACGTCTAAGAGGGTTGCCCAATCTTTT
TGATGCGCACTGACATAGTGTCTTAGATATTGTTCCAACAAAGCGTTTATTCTTTCCGTCTGGCCATCGCTTTGGGGATGGAAGCTCGTGGAGAAGTTTAAATCTGTCCC
CATCAATTTGAACAGCTCCCGCCAGAATTTCCCAGTAAAACGTGGGTCTCGGTCACTGATGATACTTTTTGGTATCCCCCACAGTTTTACTACATTCTTAAAGAACAGTC
TTGCCGCTTCGTCTACCTTTACGTCTGGTGAGCATGGTATGAAAGTGGCATATTTGCTAAATCTGTCCACGACCACCATAATGGTTCCAAAGCCATGGGATTTGGGTAAG
GCTACAATAAAGTCCATAGCGACACTATCCCATGGTTTCTCAGCAATCGGCAAGGGTTCAAGTAATCCCGCGGGAAGTTGTTGTTCCCCTTTGTCTTGTTGACAAACTAG
GCAGGTCTTGACATAACTCTCAATGTCATCCTGCATTCTTGGCCAGTAATATTTATCGTACACTAAGGCAAGTGTTCGATTCATACCTGGATGTCCAGCCCATAAGGAAT
CGTGGCATTCCCTCAAGACATCCTTCCGCAAAGCTCCCCATCTTGGCACGAACAAGCGGTTACCAGTCGTAAGGAGGGTACCATTATTCTCCCAAAATCTTCTGGTTTTT
CCCTCCTTGGCCAATTTTAGCAGATTCTTGGCCAATTCGTCGTGCTGCATTCCTTCCTTGATTCGTTCAAGGAAGTTGCTTGTGGGCATGCTTCTGGTGATTGTATTTAG
CTCGGCCTTGCGACTGAGGGCATCAGCAACAACATTTGCCCTCCCTGGTTTATACTCTAGCTTGAAGTCGAATTCAGCTAGAAAGTCTTGCCACCGTGCTTGCTTTGGTG
TCAGCTTCTTCTGGGTCTGGAAGTAGCTGGTGGCGACATTGTCCGTCATTACCGTGAATTTACTGCCTAGAAGGTAATGTCTCCAAGTTCTTAGGCAGTGGACAATGGCT
GTCATTTCTTTTTCCTGCACGGTGTAGCGTCGCTCGGTGTCGTTCAGTTTACGACTCTCAAATGCTATGGGATGGCCGTCTTGCATTAGGACTCCCCCTATTGCGAAATC
CGAGGCATCAGTGTGTACCTCAAAGGGTTTAGTGTGGTCTGCCAGTACCATTACAGGTTCCTTGGAGACGGCATGTTTTAATCTATCAAATGCTTGCTGACACTCCTCCG
TCCAACCCCATGTTTGATTTTTCTTCAACAGGTTGGTGAGAGGGGCAGCGATGCCAGAGTACCCTTTGATAAATCTCCGATAATAGTTTACGAACCCCAAGAAAGATCGC
AGTTCAGGTACTTTGGTTGGGGCCTTCCATTCTAGTATCGCACGTACCTTGGCATTGTCCATCATCAATTTGCCTTCTTTTATCCAATGTCCAAGGAACTCGACTTCTGG
CTTGGCAAAGGAACATTTTTCCAGCTTGATGTATAACTCATTGTCGCGGAGTACCTGGAAGACTTGTCTCAAGTGGTGGACATGTTCTTCTAATGTCTGACTGTAGACAA
CAATGTCATCCAGATATACTACGACAAATCGGTCTAAGAACGGCTGGAAGAGTTTGTTCATGAGTGTGCAAAATGTGGCTGGTGCGTTCGTTAGGCCAAAAGGCATAACT
AAGAATTCATAAGCACCATACCTGGTCACACACGCAGTCTTTGCTTCGTCCCCTTGCTTTATTCTGACCTGGTAATACCCGGAGCGTAGATCGATCTTGCTAAACCATCG
GGCTTTTCCTAGCTGGTCGAAAAGGTCAGCAATAAGAGGAATGGGGTACCTGTTCTTGATAGTGATCTTGTTGAGAGCCCTGTAGTCTATACAAAGTCTCAACGATCCGT
CCTTCTTCTTCTGGAAGAGTACTGGAGCACCATAGGGGGCCTTTGACGGTTGGATATATCCGGCATCGAGGAGTTCTTTCAACTGTCTTCGCAACTCTTCAAGTTCTGGA
GGGGCCATCCGATAAGGAGCCATGGCAGGTGGTTTAGCTCCTGGCTCTAGTTCGATTTCGTGATCTACTTCCCTTCTTGGGGGAAGTTTCTTCGGCAGTTCTGAAGGCAT
TATGTCCTTGTACTCATCAAGGACCTTCTGTACGATGTCTGGTACCGGAGGCTCGTCAGTTTTCGCTTCCTCGCCTTCTAGGGTCTTCATGGTTGCTACGTAACATTGGT
TCTTCGTGACTCCCCTTTTGAATTGTAAGGCTGACAACATCTTTACCGGCTTCCCTCGCCGTATGGGAATTGTTGTCATTAGCCCATCAATGATGGATAGCGTACCTCTG
TTGGAGTCTAGAAGGGTTACAACCTTATCGAAGAAACCCAAGCCAAGTACGATGTTGAAGTCGTCCATAGGCAGAACGGAGAAGTCTAGTCTCTTCTGCCAATCACCGAT
CTTCACGAGTACTCCTTTGGCTACACCATGAATGGTCTGTTCCTTGGCGTTTACTACTTTGACGGTTCCGGTTTCTTCCTTGTACTTGAGGCCTAACCTCTTAGCTTCCT
GAACATCCATAAAATTATGGGATGCTCCTGTATCAAACATTGCCGTGGCCTCTTTTCCTTCAATTCGAATGCTGCCATATAGGAGACCTTTATGTTCGACGGTAGTCTCC
TTCTTCATTACCCCTATTTGCTGCATTGACCCAATTTGGGGTCCTGGTGCATCTTCCACTTGCTTTATCTCTTGGAACTTTGCAACAAGGGCATTTAAGGCCTTTCGATT
TGGACAATCTCTAGTCCAATGCGGTCCTTTACAGATAAAGCAAGGTTTAGGAGGGTTAGAGGACTCACCTCGATGTGCACCATCATTCTTGCCATTCTTCCACTGGAAAG
TCTTCACTTTTCCCCCGTCCTTGCGACCAAAATTCTTGGTCTTGTCCGGCTTTCCTCCATGTTTCTCTGGACCAGGCTTCTTCCCCTTTGATTGGGCAGAATAGTCGACA
AGCGTCTCTGCTGCAGCTATAGCGTCGTCAAGGGTCTGGACATTACGACGGTCCAGCTCGATCTTTGCCCAATCTTTCAAGCCATCTTTGAACTGAAATAAGGCCTCCTT
TTCGGGTAGATCGCCTATCTCGAGCATTAAGGTAGTGAATTCTTTTACATATTCA
Protein sequenceShow/hide protein sequence
MRAVCCARADAARIRPSSARAGAMPCAPACPSCARAVPRAPACVACARAHAMPGPRALGCRSCVRGLQRLCHDPCVTLLIFLGPLDCVGLGWLLLGNAKEP