| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036855.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 9.1e-136 | 71.03 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT NRS+FT L +C GH TFGDGAKGKIIAKGNIDK +LP LN+VRYVDGLKANLISISQL DQ Y V F++TG VV NK NQ+ MSG+R+A+NCY+W+
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SN S+ C L + DQ WLWHRKLGH+S+R L+KVI+N+AVVGIP LD+NG FFCG+CQ+GKQT+++ + LKECYT LELLH++LMG MQTESLGGK+YV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
LVVVDDYS++TW FLK K T+++C +LCL LQREKG+K RI+SDHGKEFDNE NN C EGIHHEF+APITP+QNG+VERKNR LQEM VMIHAK
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
Query: NLPLCFWAEAVNTDCHIHNRV
N PL FWAE VNT CHIH RV
Subjt: NLPLCFWAEAVNTDCHIHNRV
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| KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.9e-152 | 78.76 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
M NRSYFTNLNDCV HVTFGDGAKGKIIAKGNIDKDDL RLNDVRYVDGLKANLI+ISQL DQ YKV FDD GCVV+NKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIRSDQ WLWHRKLGHVSMRGLEKVIKNKAVVGIP+LDVNGNFFC DCQIGKQTRST KSLKECYTNR LELLHMDLMG MQT+SLG
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
GKT T+EICKNLCLKLQRE+ KK TRI+SDHGKEFDNE FN+FCLLEG HHEFSAPITP+QNG+VERKN+TLQEM VMIHAK
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
Query: NLPLCFWAEAVNTDCHIHNRVVLLELERLLLFMNFGKRE
NLPLCF+AEAVNT CHIHNRV + + L+ ++ +R+
Subjt: NLPLCFWAEAVNTDCHIHNRVVLLELERLLLFMNFGKRE
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| KAA0048228.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 7.2e-149 | 88.93 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT N+SYFTNLNDCVTGHVTFGDGAK +IIAKGNIDKDDLPRLNDVRYVDGLK NLISISQL DQ YKV FDD GCVVMNKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIR DQ WLWHRKL HVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRST KSLKECYTNR L+LLHMDLMG MQTESLGGKRYV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTL
LVVVDDYSRYTW CFLKGK T+EICKNL LKLQREK KK TRIQSDHGKEFDNE FN+FCLLEGI+HEFSA ITP+QNG++E KNR L
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTL
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| KAA0053561.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.3e-126 | 89.52 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT NRSYFTNLNDCVT HVT GDGAKGKIIAKGNIDK DLPRLNDVRYVDGLKANLISISQL DQ YKV FDD G VVMNKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIRSDQ WLWHRKLGHVSMRGLEK+IKNKAVVGIPDLDVNGNFFCGDCQIGKQTR T K+LKECYTNR LELLHMDLMG M ESL GKRYV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
LVVVDDYSRYTW CFLK KT T+E CKNLCLKLQREKGKK TRI+SDH
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
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| TYK19154.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.3e-126 | 89.52 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT NRSYFTNLNDCVT HVT GDGAKGKIIAKGNIDK DLPRLNDVRYVDGLKANLISISQL DQ YKV FDD G VVMNKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIRSDQ WLWHRKLGHVSMRGLEK+IKNKAVVGIPDLDVNGNFFCGDCQIGKQTR T K+LKECYTNR LELLHMDLMG M ESL GKRYV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
LVVVDDYSRYTW CFLK KT T+E CKNLCLKLQREKGKK TRI+SDH
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TNK7 Gag-pol polyprotein | 3.3e-152 | 78.76 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
M NRSYFTNLNDCV HVTFGDGAKGKIIAKGNIDKDDL RLNDVRYVDGLKANLI+ISQL DQ YKV FDD GCVV+NKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIRSDQ WLWHRKLGHVSMRGLEKVIKNKAVVGIP+LDVNGNFFC DCQIGKQTRST KSLKECYTNR LELLHMDLMG MQT+SLG
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
GKT T+EICKNLCLKLQRE+ KK TRI+SDHGKEFDNE FN+FCLLEG HHEFSAPITP+QNG+VERKN+TLQEM VMIHAK
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
Query: NLPLCFWAEAVNTDCHIHNRVVLLELERLLLFMNFGKRE
NLPLCF+AEAVNT CHIHNRV + + L+ ++ +R+
Subjt: NLPLCFWAEAVNTDCHIHNRVVLLELERLLLFMNFGKRE
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| A0A5A7UJA4 Gag-pol polyprotein | 6.4e-127 | 89.52 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT NRSYFTNLNDCVT HVT GDGAKGKIIAKGNIDK DLPRLNDVRYVDGLKANLISISQL DQ YKV FDD G VVMNKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIRSDQ WLWHRKLGHVSMRGLEK+IKNKAVVGIPDLDVNGNFFCGDCQIGKQTR T K+LKECYTNR LELLHMDLMG M ESL GKRYV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
LVVVDDYSRYTW CFLK KT T+E CKNLCLKLQREKGKK TRI+SDH
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
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| A0A5D3BA69 Gag-pol polyprotein | 4.4e-136 | 71.03 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT NRS+FT L +C GH TFGDGAKGKIIAKGNIDK +LP LN+VRYVDGLKANLISISQL DQ Y V F++TG VV NK NQ+ MSG+R+A+NCY+W+
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SN S+ C L + DQ WLWHRKLGH+S+R L+KVI+N+AVVGIP LD+NG FFCG+CQ+GKQT+++ + LKECYT LELLH++LMG MQTESLGGK+YV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
LVVVDDYS++TW FLK K T+++C +LCL LQREKG+K RI+SDHGKEFDNE NN C EGIHHEF+APITP+QNG+VERKNR LQEM VMIHAK
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAK
Query: NLPLCFWAEAVNTDCHIHNRV
N PL FWAE VNT CHIH RV
Subjt: NLPLCFWAEAVNTDCHIHNRV
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| A0A5D3C7T5 Gag-pol polyprotein | 3.5e-149 | 88.93 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT N+SYFTNLNDCVTGHVTFGDGAK +IIAKGNIDKDDLPRLNDVRYVDGLK NLISISQL DQ YKV FDD GCVVMNKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIR DQ WLWHRKL HVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRST KSLKECYTNR L+LLHMDLMG MQTESLGGKRYV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTL
LVVVDDYSRYTW CFLKGK T+EICKNL LKLQREK KK TRIQSDHGKEFDNE FN+FCLLEGI+HEFSA ITP+QNG++E KNR L
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTL
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| A0A5D3D6G0 Gag-pol polyprotein | 6.4e-127 | 89.52 | Show/hide |
Query: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
MT NRSYFTNLNDCVT HVT GDGAKGKIIAKGNIDK DLPRLNDVRYVDGLKANLISISQL DQ YKV FDD G VVMNKENQICMSGKRQADNCYHWN
Subjt: MTENRSYFTNLNDCVTGHVTFGDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWN
Query: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
SNMSDTCQLIRSDQ WLWHRKLGHVSMRGLEK+IKNKAVVGIPDLDVNGNFFCGDCQIGKQTR T K+LKECYTNR LELLHMDLMG M ESL GKRYV
Subjt: SNMSDTCQLIRSDQAWLWHRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYV
Query: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
LVVVDDYSRYTW CFLK KT T+E CKNLCLKLQREKGKK TRI+SDH
Subjt: LVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKKTTRIQSDH
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| SwissProt top hits | e value | %identity | Alignment |
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| A0A0B7P3V8 Transposon Ty4-P Gag-Pol polyprotein | 9.8e-16 | 28.85 | Show/hide |
Query: HRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGN-FFCGDCQIGKQTRS---TQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRY--TW
H+++GH ++ +E IK+ DL N F+C C+I K T+ T + MD+ G + + + KRY+L++VD+ +RY T
Subjt: HRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGN-FFCGDCQIGKQTRS---TQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRY--TW
Query: DCFLK-GKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAV
F K +T +I KN+ ++ + +K I SD G EF N+ + + +GIHH ++ NG ER RT+ ++ NL + FW AV
Subjt: DCFLK-GKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAV
Query: NTDCHIHN
+ +I N
Subjt: NTDCHIHN
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| P0C2J7 Transposon Ty4-H Gag-Pol polyprotein | 9.8e-16 | 28.85 | Show/hide |
Query: HRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGN-FFCGDCQIGKQTRS---TQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRY--TW
H+++GH ++ +E IK+ DL N F+C C+I K T+ T + MD+ G + + + KRY+L++VD+ +RY T
Subjt: HRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGN-FFCGDCQIGKQTRS---TQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRY--TW
Query: DCFLK-GKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAV
F K +T +I KN+ ++ + +K I SD G EF N+ + + +GIHH ++ NG ER RT+ ++ NL + FW AV
Subjt: DCFLK-GKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAV
Query: NTDCHIHN
+ +I N
Subjt: NTDCHIHN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-36 | 32.86 | Show/hide |
Query: LNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWNSNMSDTCQLIRSDQ--AWLWHRKLGHVSMRGLEKVIKNKAVV
L DVR+V L+ NLIS L Y+ F + + K + + G + Y N+ + D+ LWH+++GH+S +GL+ + K +
Subjt: LNDVRYVDGLKANLISISQLYDQCYKVIFDDTGCVVMNKENQICMSGKRQADNCYHWNSNMSDTCQLIRSDQ--AWLWHRKLGHVSMRGLEKVIKNKAVV
Query: GIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKK
V C C GKQ R + ++ E N L+L++ D+ G M+ ES+GG +Y + +DD SR W LK K ++ + ++RE G+K
Subjt: GIPDLDVNGNFFCGDCQIGKQTRSTQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRYTWDCFLKGKTYTIEICKNLCLKLQREKGKK
Query: TTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAVNTDCHIHNR
R++SD+G E+ + F +C GI HE + P TP+ NG+ ER NRT+ E M+ LP FW EAV T C++ NR
Subjt: TTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAVNTDCHIHNR
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| P47024 Transposon Ty4-J Gag-Pol polyprotein | 1.7e-15 | 28.37 | Show/hide |
Query: HRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGN-FFCGDCQIGKQTRS---TQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRY--TW
H+++GH ++ +E IK+ DL N F+C C+I K T+ T + MD+ G + + + KRY+L++VD+ +RY T
Subjt: HRKLGHVSMRGLEKVIKNKAVVGIPDLDVNGN-FFCGDCQIGKQTRS---TQKSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRY--TW
Query: DCFLK-GKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAV
F K +T ++ KN+ ++ + +K I SD G EF N+ + + +GIHH ++ NG ER RT+ ++ NL + FW AV
Subjt: DCFLK-GKTYTIEICKNLCLKLQREKGKKTTRIQSDHGKEFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEMTHVMIHAKNLPLCFWAEAV
Query: NTDCHIHN
+ +I N
Subjt: NTDCHIHN
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| Q87040 Pro-Pol polyprotein | 2.0e-05 | 27.46 | Show/hide |
Query: CGDCQIGKQTRSTQ-KSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRYTWDCFLKGKTYTIEI-CKNLCLKLQREKGKKTTRIQSDHGK
C C I + T L+ + + +D +G + G YVLV+VD + +TW K + + + N+ + K I SD G
Subjt: CGDCQIGKQTRSTQ-KSLKECYTNRFLELLHMDLMGQMQTESLGGKRYVLVVVDDYSRYTWDCFLKGKTYTIEI-CKNLCLKLQREKGKKTTRIQSDHGK
Query: EFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEM
F + +F + GIH EFS P P+ +G VERKN ++ +
Subjt: EFDNESFNNFCLLEGIHHEFSAPITPKQNGLVERKNRTLQEM
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