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Cmc04g0103171 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0103171
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionE3 ubiquitin-protein ligase RNF4-like
Genome locationCMiso1.1chr04:20193284..20209682
RNA-Seq ExpressionCmc04g0103171
SyntenyCmc04g0103171
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144388.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus]1.5e-6199.26Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRGH TRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
        RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM

XP_008460369.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo]3.0e-62100Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
        RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM

XP_008460373.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X2 [Cucumis melo]2.1e-6099.26Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDA ERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
        RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM

XP_022967334.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima]7.9e-5587.68Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MST+AMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQ   Q+AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ
        R SNNNRSKRRRDV N+ +VNSDLLINLEASNSSM ++
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ

XP_038888129.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida]2.7e-5591.11Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQLR Q+AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEE +
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
        +VSNNNRSKRRRDVSN+  VNSDLLINLEASNSSM
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM

TrEMBL top hitse value%identityAlignment
A0A1S3CBW2 E3 ubiquitin-protein ligase RNF4-like isoform X21.0e-6099.26Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDA ERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
        RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM

A0A1S3CCB4 E3 ubiquitin-protein ligase RNF4-like isoform X11.4e-62100Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
        RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSM

A0A6J1E010 E3 ubiquitin-protein ligase RNF4 isoform X21.5e-5184.06Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRG   RGYHRRKSLDLDLNSMPP+ENRDQGE SQL LQ+A  NQQQP+QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ
        RVSNN RSKRRR+VSN+ +VNS+LLINLEASNSS+ ++
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ

A0A6J1HFU4 E3 ubiquitin-protein ligase RNF4-like1.9e-5486.96Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQ    +AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ
        R SNNNRSKRRRDV N+ +VNSDLLINLE SNSSM ++
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ

A0A6J1HQI7 E3 ubiquitin-protein ligase RNF4-like3.8e-5587.68Show/hide
Query:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS
        MST+AMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQ   Q+AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERS

Query:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ
        R SNNNRSKRRRDV N+ +VNSDLLINLEASNSSM ++
Subjt:  RVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMTDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G48655.1 RING/U-box superfamily protein4.4e-1138.62Show/hide
Query:  RGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VVDVDAEERSRVSNNNRSK
        RG  RRK++ +DLN++P  +   +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++   +R   N  +K
Subjt:  RGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VVDVDAEERSRVSNNNRSK

Query:  RRRDVSNRPSVNSD-LLINLEASNSSMTDQVLCATTGVEIPPMSC
        RRR  S+   ++ +   +N E + SS   +        E P  +C
Subjt:  RRRDVSNRPSVNSD-LLINLEASNSSMTDQVLCATTGVEIPPMSC

AT5G48655.2 RING/U-box superfamily protein4.4e-1138.62Show/hide
Query:  RGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VVDVDAEERSRVSNNNRSK
        RG  RRK++ +DLN++P  +   +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++   +R   N  +K
Subjt:  RGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VVDVDAEERSRVSNNNRSK

Query:  RRRDVSNRPSVNSD-LLINLEASNSSMTDQVLCATTGVEIPPMSC
        RRR  S+   ++ +   +N E + SS   +        E P  +C
Subjt:  RRRDVSNRPSVNSD-LLINLEASNSSMTDQVLCATTGVEIPPMSC

AT5G48655.3 RING/U-box superfamily protein4.4e-1138.62Show/hide
Query:  RGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VVDVDAEERSRVSNNNRSK
        RG  RRK++ +DLN++P  +   +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++   +R   N  +K
Subjt:  RGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VVDVDAEERSRVSNNNRSK

Query:  RRRDVSNRPSVNSD-LLINLEASNSSMTDQVLCATTGVEIPPMSC
        RRR  S+   ++ +   +N E + SS   +        E P  +C
Subjt:  RRRDVSNRPSVNSD-LLINLEASNSSMTDQVLCATTGVEIPPMSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACTCAGGCTATGAGGGGACATAACACAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTGAACAGCATGCCACCAACTGAGAACCGAGATCAAGGAGA
AACATCTCAACTGCGGCTTCAGGATGCACAGGTTAATCAACAACAGCCTGTACAGCCTGCAATGATCGACATTGAGGCCATTGATGACGATGTCATTGAATCATCCGCCA
GAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGAAATGCTAGGAAGAATGTAGTTGACGTGGATGCAGAAGAGCGGAGCAGGGTGTCAAATAATAACCGGAGCAAGCGT
AGGAGAGATGTGTCTAACAGACCGTCTGTAAATTCAGATTTATTAATCAATTTGGAAGCGAGCAACAGTTCTATGACAGACCAAGTTTTGTGTGCCACCACTGGAGTGGA
AATTCCCCCAATGAGTTGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
GTAGGCACGTGCGATGGAAAGAGAGGGAAGAAAGCGAGCAAACACGTGTCACACAATTATTGGACGTGAGTAAAAGACGTGGCGCCTTTCAGGCTCGTCTCCTCTTTCAC
TCTCCCCGCAAGAACCCTGGAACTTCCCTGTGCCGTGTCTCCATTCTCGTCCTCAATCTCAATCTTTTTCTTATTTTCTCCCTTTATAATGCCGACTTTTCCTTCTCTTT
CCCTTCCATTTCTCAACCCTTAGAATCCTGACTACAAATATCACAAACCCTAGAAGAACTAATCATATAATCAAATCTAATCTATCTAACCCCTCAAATTTGGTAGATAT
TTTTTCAACCGCTTATTTCAGGTTGCTGAGGAGCTTGAAGATATAGATGAGTACTCAGGCTATGAGGGGACATAACACAAGAGGTTATCATCGTAGGAAATCATTGGACT
TGGACCTGAACAGCATGCCACCAACTGAGAACCGAGATCAAGGAGAAACATCTCAACTGCGGCTTCAGGATGCACAGGTTAATCAACAACAGCCTGTACAGCCTGCAATG
ATCGACATTGAGGCCATTGATGACGATGTCATTGAATCATCCGCCAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGAAATGCTAGGAAGAATGTAGTTGACGTGGA
TGCAGAAGAGCGGAGCAGGGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGATGTGTCTAACAGACCGTCTGTAAATTCAGATTTATTAATCAATTTGGAAGCGAGCA
ACAGTTCTATGACAGACCAAGTTTTGTGTGCCACCACTGGAGTGGAAATTCCCCCAATGAGTTGCTGCTGAGCTCTTTCTCTCCTGGACCTTGGTTTATCAGCTGATTGG
GTTCGGTAGCTTTTGTTTCTCCCCTTTGGAGAAGTTAAGTTAGTTTGTTTTAACAATAATTTATTACCTCTTTCTCTCTCTCCTTCTATGTGTGAGTGCTGCTGTTCTTT
TGGTTGGTTTATGTTCAAAGTTAGGGTTGTTCACAGGTAACAGACAAATGAGAGAGGAAGAATAGAAATAATTAAAAAATGTAAGGTTGGGTTGGGCAGCCGTTTTCTCT
GTAGGAAAAATAGACTATGATCACTGTATCCATAAAACCAATCGTTTGATGTTGGTTTCAGTTGGTCATCGCAGTTTTCGGTCCAACTTTGTTCTGTTGGTTAATTCTTC
AATTTCTGGAACCATCATGGATTGATCTTTATTTTCAGTGGTAGCATCTTATTAGCTGTTATTGTTGAAAATGTCATTTTGTAAGGATAAATAAAGTATATGCTGAAAAT
GGAATTATGTCTCTACTGCTTAATATTGAGCCAACATGTGATTTCTGTGCTATTGGCAGAAAGTGAAGCCTGCTCCACCGAAAGAGCCCAAATTCAGTTGTCCAATATGC
ATGGGTCCGTTAGTAGAAGAAACATCAACAAAGTGTGGTCATATTTTCTGTAAGGCATGCATCAGGGCTGCAATAGGCGTCCAGAGTAAATGCCCAACATGTAGGAAGAG
AGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGAGGCTTACGTCTCACACCGGATTTTTTTAAGACTTCGAAAGGAAACGGCAGAAGTT
CTTTTGTAAGTAAGAAAAAAGCTAATTTTTAGATGGAAATTTCCAGTGTATTCTGCTGATTGCCTGCATTTTGATGATCTCAGAGTTGCATTAGGAGGAAATGCAGGAAA
TTCTAATTTCCTTAATTGTTTTTTGTTGTCAACTTTGATGATTTTATGAAGTTGTAAACAAACTGACAACGAAATCCGGCAGTAATGCAATGAGTTTACATAATTATTAA
ATTAGAAAGTTGCTTTTGTTGGTAGACTTCTGGTTGTCTCTCATCTATGTTATTTATATATCTGATTTTGATTTGATGATCATAGTATATATTTGTTTGAATCTTTTTAG
AGCCTAGTGCTCATATCTTGAAAGACAATATACTATCTCTTGCTAATTAGTTTCTGGGATCATGTTGGAGAAAGTTCTAACTAAATGACTGGAAATATGAAGAGAGGCCA
AATAGTAGACCTTTAAGAAAGATTTTTGATTCATTACCTTGGCCATGCTTACATATCTATTAAAGCACCAATCCCATTAAGCAAGACTTAATTATATTTCATACATTTTA
TTCATAGAGCCCATAAGCAATTCTATGCTTGTAGAGGTTTCTTTAGCACTGCTTTTCAGGGGTAGCTCTGGTGAACTCCATACTTTTCACCCATCTCTTTCAGCTTTGTT
ATCGGTTTCTTATACGGACCCCAGTTGTATTGATGGTCAACATCCTCGTTGTAGGGAGATTTGTCACAGTTGCCATATTCATAGCAATCTTTGTCTTTGTATTTGTATCC
ATCACATTCATAATCCTCCTTGGGTTTGTATCCCTCGTAATCCTCCTTGGGTTTATATCCCTCGTAATTATCATCTAATTCTTGGGGATAAGTTTTTGCAGTTGGTTTCT
TCAGAGCCATTTCTCTTCCTCCTTCAACATTTTCCAGAAGTGTCATTGCCACTGCAGAGACCACGAGGATCGCAATGAGAACCTTACTGATCGTCATTTTTCTAACTTTG
GTTTCTCTTTTTGTAGTGAAAATTGTTGAGGCCTCCAAATTTATATAGCTAACCAGGGAGTTTAGGTAGCCTTTTTGGATTAAATAATTTATGAGTTTCTGCAGGGGAAT
CTTTGTTCTAATGGAAACAAGTAGTTGAGTGGCCTCGTTGCAATTCATTGCCTCTAAATTTG
Protein sequenceShow/hide protein sequence
MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERSRVSNNNRSKR
RRDVSNRPSVNSDLLINLEASNSSMTDQVLCATTGVEIPPMSCC