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Cmc04g0103331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0103331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationCMiso1.1chr04:20399761..20400563
RNA-Seq ExpressionCmc04g0103331
SyntenyCmc04g0103331
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041797.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]2.2e-5585.83Show/hide
Query:  MLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNL
        MLRKYT +HDC LSTAQSSHMQASS VIDNCL+D+FRFMS DRSI KEIVHK RTN GVNISYQKAWRAKE+MVK+LHGDTVESYALIP FFDKLVESN 
Subjt:  MLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNL

Query:  GTCTALEMDDRGNFKFCFMTFGASIEG
        GTCTALE+DD G+FKFCFM FGASIEG
Subjt:  GTCTALEMDDRGNFKFCFMTFGASIEG

TYK02726.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.8e-6481.05Show/hide
Query:  SLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMV
        SL     ++  KWYV+AS YKKSDLWMLRKYT DHDCSLSTAQSSHMQASS VI NCLID+FRFMSTDR IPKEIVHKARTN GVNISYQKAWRAKEYMV
Subjt:  SLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMV

Query:  KLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIEG
        K+LHG+TVE YALIP FFDKLVESN G C ALEMDD G+FKFC M FGASI+G
Subjt:  KLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIEG

TYK18851.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.7e-7786.83Show/hide
Query:  VKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGV
        +KNNFQFRTTVSNLRSLEFRCLQE CKWYVRASRYKKSDLWML+KYT DHD SLST QSSHMQASS VI NCLID+FRFMSTDR IPKEIVHKARTN GV
Subjt:  VKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGV

Query:  NISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIE
        NISYQKAWR KE+MVK+LHGDTVESYALIP FFDKLVE NLGTC ALEMDD    KFCFM FGASIE
Subjt:  NISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIE

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]7.8e-6961.32Show/hide
Query:  LNIGFSSSVSNDEVIRDISYYFDLKEKSLFESKEVLSKCFCIIAVKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLST
        L +G SS  SND+VI+++ +  DLKEK +F SKE+L KCF +IAV  NFQFRTT SN +S E +CLQE C+WYVRAS YKKS+LWMLRKY  DH+C ++T
Subjt:  LNIGFSSSVSNDEVIRDISYYFDLKEKSLFESKEVLSKCFCIIAVKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLST

Query:  AQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFK
         QS H QASS VI + L ++FRF+STD S+P++IV+KART  GVNISYQKAWR KE++++ L+GD  +SY+LIP FF +L E N GT TAL++D+ G+FK
Subjt:  AQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFK

Query:  FCFMTFGASIEG
         CFM  GASIEG
Subjt:  FCFMTFGASIEG

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]4.6e-6160.5Show/hide
Query:  EVIRDISYYFDLKEKSLFESKEVLSKCFCIIAVKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKV
        +VI DI    DLKEK +F SKE+LSKCF  IAVK NF+F+T  SN RS+EFRC+Q+ C+WYVRASRYK SDLWMLRK+   HDCS++  Q+SH QAS+ +
Subjt:  EVIRDISYYFDLKEKSLFESKEVLSKCFCIIAVKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKV

Query:  IDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIEG
        I +CL + FR  S+D   PK+IV+K R   GVNISY KAWRAKE+++K L GD  ESYALIP F  KL E N GT TA E D  G+FK+C+M  G+SIEG
Subjt:  IDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIEG

TrEMBL top hitse value%identityAlignment
A0A5A7TJB7 Protein FAR1-RELATED SEQUENCE 2-like1.1e-5585.83Show/hide
Query:  MLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNL
        MLRKYT +HDC LSTAQSSHMQASS VIDNCL+D+FRFMS DRSI KEIVHK RTN GVNISYQKAWRAKE+MVK+LHGDTVESYALIP FFDKLVESN 
Subjt:  MLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNL

Query:  GTCTALEMDDRGNFKFCFMTFGASIEG
        GTCTALE+DD G+FKFCFM FGASIEG
Subjt:  GTCTALEMDDRGNFKFCFMTFGASIEG

A0A5A7VAF9 Gag protease polyprotein1.4e-5588.8Show/hide
Query:  SLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMV
        S EFRCLQE  KWYVRASRYKKSDLWMLRKYT D +CSLSTAQSSHMQASS VI NCLID+FRFMSTDRSIPKEIVHKARTN GVNISYQKAWR KE+MV
Subjt:  SLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMV

Query:  KLLHGDTVESYALIPIFFDKLVESN
        K+LHGDTVESYALIP FFDKLVESN
Subjt:  KLLHGDTVESYALIPIFFDKLVESN

A0A5D3BWW9 Retrotransposon gag protein2.8e-6481.05Show/hide
Query:  SLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMV
        SL     ++  KWYV+AS YKKSDLWMLRKYT DHDCSLSTAQSSHMQASS VI NCLID+FRFMSTDR IPKEIVHKARTN GVNISYQKAWRAKEYMV
Subjt:  SLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMV

Query:  KLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIEG
        K+LHG+TVE YALIP FFDKLVESN G C ALEMDD G+FKFC M FGASI+G
Subjt:  KLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIEG

A0A5D3D5M1 MuDRA-like transposase1.3e-7786.83Show/hide
Query:  VKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGV
        +KNNFQFRTTVSNLRSLEFRCLQE CKWYVRASRYKKSDLWML+KYT DHD SLST QSSHMQASS VI NCLID+FRFMSTDR IPKEIVHKARTN GV
Subjt:  VKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGV

Query:  NISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIE
        NISYQKAWR KE+MVK+LHGDTVESYALIP FFDKLVE NLGTC ALEMDD    KFCFM FGASIE
Subjt:  NISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIE

A0A5D3DX57 MuDR family transposase1.4e-5553.52Show/hide
Query:  SSSVSND-EVIRDI-----SYYFDLKEKSLFESKEVLSKCFCIIAVKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLS
        SSS+ +D +++ DI     S  F+LKEK +F SKE+LSK F  IA+KNNF+F+T  SN +S+EF+C Q+ C WYVRASRYK  +LW LRKY  +H+CS++
Subjt:  SSSVSND-EVIRDI-----SYYFDLKEKSLFESKEVLSKCFCIIAVKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLS

Query:  TAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNF
          Q++H QASS +I +C++ +  F S DRS P +I+   RT  GVN+SY KAWRAKE ++  L+G+  ESYALIP FF KL E N G+ TA E D  G+F
Subjt:  TAQSSHMQASSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNF

Query:  KFCFMTFGASIEG
        K+CFM  GA IEG
Subjt:  KFCFMTFGASIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTGAATATAGGTTTTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGACATCTCTTATTATTTTGATTTGAAGGAAAAAAGTTTATTTGAAAGTAAAGAAGT
GCTTTCAAAGTGTTTTTGCATAATAGCAGTGAAGAACAACTTTCAATTTAGGACTACAGTATCAAATTTGAGGTCTCTTGAATTTAGATGTCTGCAAGAATGCTGCAAAT
GGTATGTAAGGGCATCTCGTTATAAGAAGAGTGATTTGTGGATGCTACGAAAATACACTTATGACCATGATTGTTCATTGAGTACTGCCCAAAGTTCTCACATGCAAGCT
TCTTCAAAAGTAATTGACAATTGTTTGATAGATAATTTTAGATTCATGTCTACTGATCGTTCCATTCCTAAAGAAATTGTGCATAAGGCTCGTACAAATTTTGGAGTTAA
TATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAATATATGGTAAAGCTATTACATGGTGACACAGTTGAATCGTATGCATTGATTCCAATATTCTTTGATAAATTGGTTG
AATCTAATCTAGGTACATGCACTGCTTTAGAAATGGATGATAGGGGTAATTTCAAGTTTTGCTTTATGACTTTTGGTGCATCAATTGAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTGAATATAGGTTTTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGACATCTCTTATTATTTTGATTTGAAGGAAAAAAGTTTATTTGAAAGTAAAGAAGT
GCTTTCAAAGTGTTTTTGCATAATAGCAGTGAAGAACAACTTTCAATTTAGGACTACAGTATCAAATTTGAGGTCTCTTGAATTTAGATGTCTGCAAGAATGCTGCAAAT
GGTATGTAAGGGCATCTCGTTATAAGAAGAGTGATTTGTGGATGCTACGAAAATACACTTATGACCATGATTGTTCATTGAGTACTGCCCAAAGTTCTCACATGCAAGCT
TCTTCAAAAGTAATTGACAATTGTTTGATAGATAATTTTAGATTCATGTCTACTGATCGTTCCATTCCTAAAGAAATTGTGCATAAGGCTCGTACAAATTTTGGAGTTAA
TATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAATATATGGTAAAGCTATTACATGGTGACACAGTTGAATCGTATGCATTGATTCCAATATTCTTTGATAAATTGGTTG
AATCTAATCTAGGTACATGCACTGCTTTAGAAATGGATGATAGGGGTAATTTCAAGTTTTGCTTTATGACTTTTGGTGCATCAATTGAGGGGTGA
Protein sequenceShow/hide protein sequence
MSLNIGFSSSVSNDEVIRDISYYFDLKEKSLFESKEVLSKCFCIIAVKNNFQFRTTVSNLRSLEFRCLQECCKWYVRASRYKKSDLWMLRKYTYDHDCSLSTAQSSHMQA
SSKVIDNCLIDNFRFMSTDRSIPKEIVHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDRGNFKFCFMTFGASIEG