; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0103421 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0103421
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:20489423..20490184
RNA-Seq ExpressionCmc04g0103421
SyntenyCmc04g0103421
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]5.1e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]5.1e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]5.1e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]5.1e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

TYK08526.1 Beta-galactosidase [Cucumis melo var. makuwa]3.9e-13694.47Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPS+QQIADVLTK L GPHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase2.5e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

A0A5A7VLQ7 Beta-galactosidase2.5e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

A0A5D3BJK7 Beta-galactosidase2.5e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

A0A5D3C4T4 Beta-galactosidase2.5e-13694.86Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPSSQQIADVLTK LL PHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

A0A5D3CDU8 Beta-galactosidase1.9e-13694.47Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML CRPADT IEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISF VSVVSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        S+WAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQE ETPLKLFCDN+AAISIANNPVQHDRTKHVEI 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT
        RHFIKERLDSG+ICIPYIPS+QQIADVLTK L GPHFDLCVSKLGLIDIY+PT
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.1e-4338.34Show/hide
Query:  MLRCRPADTSI--EFNCKLGNSDDQVPVDKEQYQRLVGKLIYLS-HTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRK--TNRKTI
        M  C    T +  + N +L NSD+         + L+G L+Y+   TRPD++  V+++S++      +  + + ++LRYLK T    L+F+K       I
Subjt:  MLRCRPADTSI--EFNCKLGNSDDQVPVDKEQYQRLVGKLIYLS-HTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRK--TNRKTI

Query:  EAYTDSNWAGSVIDRKSTSGYCTFVWG-NLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRT
          Y DS+WAGS IDRKST+GY   ++  NL+ W +K+Q+ VA SS EAEY A+   + E +WL+ +L+ ++ + E P+K++ DN+  ISIANNP  H R 
Subjt:  EAYTDSNWAGSVIDRKSTSGYCTFVWG-NLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRT

Query:  KHVEIYRHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLI
        KH++I  HF +E++ +  IC+ YIP+  Q+AD+ TK L    F     KLGL+
Subjt:  KHVEIYRHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-3734.78Show/hide
Query:  MLRCRPADTSIEFNCKLGNS------DDQVPVDKEQYQRLVGKLIY-LSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRK
        M   +P  T +  + KL         +++  + K  Y   VG L+Y +  TRPDI+  V VVS+F++ P ++H EAV  ILRYL+ T G  L F  ++  
Subjt:  MLRCRPADTSIEFNCKLGNS------DDQVPVDKEQYQRLVGKLIY-LSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRK

Query:  TIEAYTDSNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDR
         ++ YTD++ AG + +RKS++GY     G  ++W+SK Q  VA S+ EAEY A +    E IWL++ L +L   ++    ++CD+++AI ++ N + H R
Subjt:  TIEAYTDSNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDR

Query:  TKHVEIYRHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGL
        TKH+++  H+I+E +D  ++ +  I +++  AD+LTK +    F+LC   +G+
Subjt:  TKHVEIYRHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGL

P92519 Uncharacterized mitochondrial protein AtMg008102.2e-2839.1Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML C+P  T +        S  + P D   ++ +VG L YL+ TRPDIS+ V++V Q M  P     + + ++LRY+K T   GL   K ++  ++A+ D
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
        S+WAG    R+ST+G+CTF+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.1e-4738.62Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        M+  +P  T +  + KL         D  +Y+ +VG L YL+ TRPDIS+ V+ +SQFM  P E+H++A+ +ILRYL  TP  G+  +K N  ++ AY+D
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY
        ++WAG   D  ST+GY  ++  + ++W SKKQ  V RSS EAEYR+++    E  W+  +L++L      P  ++CDN  A  +  NPV H R KH+ I 
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIY

Query:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGL
         HFI+ ++ SG + + ++ +  Q+AD LTK L    F    SK+G+
Subjt:  RHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.5e-4537.2Show/hide
Query:  MLRCRPADTSIEFNCKLG-NSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYT
        ML  +P  T +  + KL  +S  ++P D  +Y+ +VG L YL+ TRPD+S+ V+ +SQ+M  P + H  A+ ++LRYL  TP  G+  +K N  ++ AY+
Subjt:  MLRCRPADTSIEFNCKLG-NSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYT

Query:  DSNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEI
        D++WAG   D  ST+GY  ++  + ++W SKKQ  V RSS EAEYR+++    E  W+  +L++L  +   P  ++CDN  A  +  NPV H R KH+ +
Subjt:  DSNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEI

Query:  YRHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDI
          HFI+ ++ SG + + ++ +  Q+AD LTK L    F     K+G+I +
Subjt:  YRHFIKERLDSGNICIPYIPSSQQIADVLTKELLGPHFDLCVSKLGLIDI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.8e-4543.13Show/hide
Query:  MLRCRPA----DTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIE
        +L C+P+    D S+ F+   G       VD + Y+RL+G+L+YL  TR DISF V+ +SQF +AP   H +AV KIL Y+K T G+GL +       ++
Subjt:  MLRCRPA----DTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIE

Query:  AYTDSNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKH
         ++D+++      R+ST+GYC F+  +L++W+SKKQ VV++SS EAEYRA+S    E +WL +   +L      P  LFCDN AAI IA N V H+RTKH
Subjt:  AYTDSNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKH

Query:  VEIYRHFIKER
        +E   H ++ER
Subjt:  VEIYRHFIKER

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.2e-1341.46Show/hide
Query:  IYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSNWAGSVIDRKSTSGYCTFV
        +YL+ TRPD++F V+ +SQF  A     M+AV K+L Y+K T G+GL +  T+   ++A+ DS+WA     R+S +G+C+ V
Subjt:  IYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSNWAGSVIDRKSTSGYCTFV

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-2939.1Show/hide
Query:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML C+P  T +        S  + P D   ++ +VG L YL+ TRPDIS+ V++V Q M  P     + + ++LRY+K T   GL   K ++  ++A+ D
Subjt:  MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW
        S+WAG    R+ST+G+CTF+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Subjt:  SNWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGATGTCGTCCTGCTGATACTTCTATTGAATTCAATTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAA
ATTAATTTACTTATCCCATACTCGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAAAATCC
TGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAAATTGGGCAGGATCTGTTATTGACAGA
AAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGTTGAGGCTGAATACAGAGCTAT
GAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATATGAGACACCATTAAAGCTTTTTTGTGATAACGAAGCCGCTATTAGTA
TTGCTAACAACCCAGTTCAACATGATAGAACTAAACATGTTGAGATTTATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAACATATGCATTCCGTACATTCCTTCA
AGCCAACAGATTGCTGATGTTCTTACCAAGGAGCTTCTCGGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATCGATATTTACATCCCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGATGTCGTCCTGCTGATACTTCTATTGAATTCAATTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAA
ATTAATTTACTTATCCCATACTCGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAAAATCC
TGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAAATTGGGCAGGATCTGTTATTGACAGA
AAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGTTGAGGCTGAATACAGAGCTAT
GAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATATGAGACACCATTAAAGCTTTTTTGTGATAACGAAGCCGCTATTAGTA
TTGCTAACAACCCAGTTCAACATGATAGAACTAAACATGTTGAGATTTATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAACATATGCATTCCGTACATTCCTTCA
AGCCAACAGATTGCTGATGTTCTTACCAAGGAGCTTCTCGGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATCGATATTTACATCCCAACTTGA
Protein sequenceShow/hide protein sequence
MLRCRPADTSIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFVVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSNWAGSVIDR
KSTSGYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQEYETPLKLFCDNEAAISIANNPVQHDRTKHVEIYRHFIKERLDSGNICIPYIPS
SQQIADVLTKELLGPHFDLCVSKLGLIDIYIPT