; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0103441 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0103441
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:20492018..20492818
RNA-Seq ExpressionCmc04g0103441
SyntenyCmc04g0103441
Gene Ontology termsGO:0006116 - NADH oxidation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005777 - peroxisome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003954 - NADH dehydrogenase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]4.6e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

KAA0034386.1 Beta-galactosidase [Cucumis melo var. makuwa]4.6e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]4.6e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]4.6e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]4.6e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase2.2e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

A0A5A7V0Y9 Beta-galactosidase2.2e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

A0A5A7VLQ7 Beta-galactosidase2.2e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

A0A5D3BJK7 Beta-galactosidase2.2e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

A0A5D3C4T4 Beta-galactosidase2.2e-13589.85Show/hide
Query:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        MPQSLGLIS+D KNPWILDSGATDHLTGSSE FISY PC GNEKIRIADGSLA I  KGQIVPFD FALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
Subjt:  MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS
        ESVYFQDMSS RTI T  +SRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ+LF HLFSK+DV SLSCDVCIRAKQH++SF S
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLS

Query:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT
        QPYKPTQPF  IHSDVWGP KVTTSS KRWFVTFIDDHTRLTWVYLI+DKSEV SIFQNFYHTIKT
Subjt:  QPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-1226.36Show/hide
Query:  WILDSGATDHLTGSSEQFISYTPCGGNEKIRIA-DGSLAQIVSKGQIVPFDD--FALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSER
        ++LDSGA+DHL      +          KI +A  G       +G +   +D    L++VL   + + NL+S+ ++             S+ F D S   
Subjt:  WILDSGATDHLTGSSEQFISYTPCGGNEKIRIA-DGSLAQIVSKGQIVPFDD--FALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSER

Query:  TIDTTPYSRGLYILDDDTSCSSLSRVSLLS-SYFSTSEQDCMLWHFRLGHPNFTYM-----QYLFS--HLFSKLDVPSLSCDVCIRAKQHQISF--LSQP
            T    GL ++ +    +++  ++  + S  +  + +  LWH R GH +   +     + +FS   L + L++    C+ C+  KQ ++ F  L   
Subjt:  TIDTTPYSRGLYILDDDTSCSSLSRVSLLS-SYFSTSEQDCMLWHFRLGHPNFTYM-----QYLFS--HLFSKLDVPSLSCDVCIRAKQHQISF--LSQP

Query:  YKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNF
            +P   +HSDV GP    T   K +FV F+D  T     YLI  KS+V S+FQ+F
Subjt:  YKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-1826.14Show/hide
Query:  KNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDD----FALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDM
        ++ W++D+ A+ H T   + F  Y   G    +++ + S ++I   G I    +      L++V HVP L  NL+S   + R+ +          YF + 
Subjt:  KNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDD----FALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDM

Query:  SSERTIDTTPYSRG-----LYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLF-SHLFSKLDVPSLS-CDVCIRAKQHQISFLSQ
            T  +   ++G     LY  + +     L+         +  E    LWH R+GH +   +Q L    L S     ++  CD C+  KQH++SF + 
Subjt:  SSERTIDTTPYSRG-----LYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLF-SHLFSKLDVPSLS-CDVCIRAKQHQISFLSQ

Query:  PYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIK
          +       ++SDV GP ++ +    ++FVTFIDD +R  WVY++  K +V  +FQ F+  ++
Subjt:  PYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIK

Q12501 Transposon Ty2-OR2 Gag-Pol polyprotein7.3e-1124.73Show/hide
Query:  ILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFD-----DFALQN-------VLHVPKLSYNLLSISKITRELHCKAIFLPESVY
        ++DSGA+  L  S+      TP   N +I I D       ++ Q +P +      F  QN        LH P ++Y+LLS+S++T + +  A F   ++ 
Subjt:  ILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFD-----DFALQN-------VLHVPKLSYNLLSISKITRELHCKAIFLPESVY

Query:  FQDMSSERTIDTTPYSRG-------LYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ---------YLFSHLFSKLDVPSLSCDVC
             S+ T+       G        Y++    S  +++ V+      S ++    L H  LGH NF  +Q         YL        +  +  C  C
Subjt:  FQDMSSERTIDTTPYSRG-------LYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQ---------YLFSHLFSKLDVPSLSCDVC

Query:  IRAK----QHQISFLSQPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSE--VLSIFQNFYHTIK
        +  K    +H      +  +  +PF ++H+D++GP      S   +F++F D+ TR  WVY + D+ E  +L++F +    IK
Subjt:  IRAK----QHQISFLSQPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSE--VLSIFQNFYHTIK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.2e-2529.1Show/hide
Query:  SLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQI---VPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP
        +L L S    N W+LDSGAT H+T        + P  G + + +ADGS   I   G            L N+L+VP +  NL+S+ ++         F P
Subjt:  SLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQI---VPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLP

Query:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPS---LSCDVCIRAKQHQIS
         S   +D+++   +        LY    +   +S   VSL +S   +S+     WH RLGHP  + +  + S+    +  PS   LSC  C+  K +++ 
Subjt:  ESVYFQDMSSERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPS---LSCDVCIRAKQHQIS

Query:  FLSQPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIK
        F       T+P  +I+SDVW    + +    R++V F+D  TR TW+Y +  KS+V   F  F + ++
Subjt:  FLSQPYKPTQPFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-2429.6Show/hide
Query:  NPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQI---VPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSS
        N W+LDSGAT H+T        + P  G + + IADGS   I   G            L  VL+VP +  NL+S+ ++         F P S   +D+++
Subjt:  NPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQI---VPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSS

Query:  ERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPS---LSCDVCIRAKQHQISFLSQPYKPTQ
           +        LY    +   +S   VS+ +S  S +      WH RLGHP+   +  + S+    +  PS   LSC  C   K H++ F +     ++
Subjt:  ERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPS---LSCDVCIRAKQHQISFLSQPYKPTQ

Query:  PFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIF
        P  +I+SDVW    + +    R++V F+D  TR TW+Y +  KS+V   F
Subjt:  PFTFIHSDVWGPFKVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIF

Arabidopsis top hitse value%identityAlignment
ATMG00300.1 Gag-Pol-related retrotransposon family protein2.5e-0632.56Show/hide
Query:  SSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLF-SKLDVPSLS-CDVCIRAKQHQISFLSQPYKPTQPFTFIHSDVWGPFKVTTS
        S+   T++ +  LWH RL H +   M+ L    F     V SL  C+ CI  K H+++F +  +    P  ++HSD+WG   V  S
Subjt:  SSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLF-SKLDVPSLS-CDVCIRAKQHQISFLSQPYKPTQPFTFIHSDVWGPFKVTTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAGTCCCTTGGGCTTATTAGCCTTGATGAGAAGAATCCCTGGATCTTAGACTCGGGGGCTACAGATCACTTGACAGGTTCTTCGGAACAGTTTATCTCGTATAC
CCCGTGTGGCGGTAATGAAAAAATCCGAATAGCCGATGGCTCTCTAGCTCAGATCGTTAGCAAAGGACAAATAGTTCCTTTTGACGATTTTGCTCTCCAGAATGTTTTGC
ATGTCCCTAAATTGTCTTACAATTTGTTATCTATAAGCAAGATCACTCGTGAGTTGCATTGTAAAGCTATCTTCTTACCTGAATCGGTTTATTTTCAGGACATGAGCTCG
GAGAGGACGATTGACACTACCCCGTATAGTAGGGGACTTTACATCCTTGATGATGATACCTCATGTAGTAGTTTGTCTAGGGTTAGTTTACTGTCATCCTACTTTAGCAC
TTCTGAACAAGACTGTATGTTGTGGCATTTTCGACTGGGCCACCCAAACTTTACATATATGCAATATTTATTTTCCCACCTTTTTTCTAAACTTGATGTCCCTTCTCTAT
CTTGTGATGTGTGTATCCGGGCTAAACAACATCAGATCTCTTTTCTCTCACAACCATATAAACCTACACAACCATTTACCTTCATCCATAGTGACGTTTGGGGTCCTTTC
AAGGTCACCACCTCCTCGAGAAAGCGGTGGTTTGTAACTTTCATCGATGACCATACCCGTCTTACCTGGGTCTACCTTATCACAGATAAATCCGAGGTTCTATCCATTTT
CCAAAACTTCTATCATACTATCAAAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAGTCCCTTGGGCTTATTAGCCTTGATGAGAAGAATCCCTGGATCTTAGACTCGGGGGCTACAGATCACTTGACAGGTTCTTCGGAACAGTTTATCTCGTATAC
CCCGTGTGGCGGTAATGAAAAAATCCGAATAGCCGATGGCTCTCTAGCTCAGATCGTTAGCAAAGGACAAATAGTTCCTTTTGACGATTTTGCTCTCCAGAATGTTTTGC
ATGTCCCTAAATTGTCTTACAATTTGTTATCTATAAGCAAGATCACTCGTGAGTTGCATTGTAAAGCTATCTTCTTACCTGAATCGGTTTATTTTCAGGACATGAGCTCG
GAGAGGACGATTGACACTACCCCGTATAGTAGGGGACTTTACATCCTTGATGATGATACCTCATGTAGTAGTTTGTCTAGGGTTAGTTTACTGTCATCCTACTTTAGCAC
TTCTGAACAAGACTGTATGTTGTGGCATTTTCGACTGGGCCACCCAAACTTTACATATATGCAATATTTATTTTCCCACCTTTTTTCTAAACTTGATGTCCCTTCTCTAT
CTTGTGATGTGTGTATCCGGGCTAAACAACATCAGATCTCTTTTCTCTCACAACCATATAAACCTACACAACCATTTACCTTCATCCATAGTGACGTTTGGGGTCCTTTC
AAGGTCACCACCTCCTCGAGAAAGCGGTGGTTTGTAACTTTCATCGATGACCATACCCGTCTTACCTGGGTCTACCTTATCACAGATAAATCCGAGGTTCTATCCATTTT
CCAAAACTTCTATCATACTATCAAAACATAA
Protein sequenceShow/hide protein sequence
MPQSLGLISLDEKNPWILDSGATDHLTGSSEQFISYTPCGGNEKIRIADGSLAQIVSKGQIVPFDDFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSS
ERTIDTTPYSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFSHLFSKLDVPSLSCDVCIRAKQHQISFLSQPYKPTQPFTFIHSDVWGPF
KVTTSSRKRWFVTFIDDHTRLTWVYLITDKSEVLSIFQNFYHTIKT