; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0103501 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0103501
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:20606240..20606722
RNA-Seq ExpressionCmc04g0103501
SyntenyCmc04g0103501
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035088.1 Beta-galactosidase [Cucumis melo var. makuwa]4.9e-6881.93Show/hide
Query:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV
        + KLI L +T  DI FAVSVVSQFMQAPYE+HME + RILRYLK  PGKGLMFRKT+RKTIEAYTDSDWT SV+DRKSTSGYCTFVWGNLVTWRSKK+SV
Subjt:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV

Query:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
              EAEYRAMSLGICEEIWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Subjt:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

KAA0068106.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.2e-7597.2Show/hide
Query:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
        +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
Subjt:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL

Query:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
        QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
Subjt:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]6.5e-6881.93Show/hide
Query:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV
        + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKTIEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV
Subjt:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV

Query:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
              EAEYRAMSLGICEEIWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Subjt:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]6.5e-6881.93Show/hide
Query:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV
        + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKTIEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV
Subjt:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV

Query:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
              EAEYRAMSLGICEEIWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Subjt:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

TYK26089.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.2e-7597.2Show/hide
Query:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
        +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
Subjt:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL

Query:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
        QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
Subjt:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

TrEMBL top hitse value%identityAlignment
A0A5A7SWV4 Beta-galactosidase2.4e-6881.93Show/hide
Query:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV
        + KLI L +T  DI FAVSVVSQFMQAPYE+HME + RILRYLK  PGKGLMFRKT+RKTIEAYTDSDWT SV+DRKSTSGYCTFVWGNLVTWRSKK+SV
Subjt:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV

Query:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
              EAEYRAMSLGICEEIWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Subjt:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

A0A5A7VNE8 Putative mitochondrial protein2.0e-7597.2Show/hide
Query:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
        +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
Subjt:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL

Query:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
        QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
Subjt:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

A0A5D3BJK7 Beta-galactosidase3.1e-6881.93Show/hide
Query:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV
        + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKTIEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV
Subjt:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV

Query:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
              EAEYRAMSLGICEEIWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Subjt:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

A0A5D3C4T4 Beta-galactosidase3.1e-6881.93Show/hide
Query:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV
        + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKTIEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV
Subjt:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV

Query:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
              EAEYRAMSLGICEEIWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Subjt:  ------EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

A0A5D3DRR4 Putative mitochondrial protein2.0e-7597.2Show/hide
Query:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
        +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL
Subjt:  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWL

Query:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
        QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
Subjt:  QKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.0e-2037.18Show/hide
Query:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRK--TDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWG-NLVTWRSKKK------SVEAE
        D+  AV+++S++      E  + +KR+LRYLK      L+F+K       I  Y DSDW  S +DRKST+GY   ++  NL+ W +K++      S EAE
Subjt:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRK--TDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWG-NLVTWRSKKK------SVEAE

Query:  YRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEI
        Y A+   + E +WL+ +   ++ + E  +K++ DN   ISIANNP  H R KH++I
Subjt:  YRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEI

P0CV72 Secreted RxLR effector protein 1611.3e-1541.44Show/hide
Query:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRA
        D+  AV V+SQF   P   H +A+KR+LRYL+     GL F +     +  Y+D+DW   V  R+STSGY   + G  V+WRSKK+      S E EY A
Subjt:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRA

Query:  MSLGICEEIWL
        +S    E +WL
Subjt:  MSLGICEEIWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.5e-1936.77Show/hide
Query:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRA
        DI  AV VVS+F++ P +EH EA+K ILRYL+   G  L F  +D   ++ YTD+D    + +RKS++GY     G  ++W+SK +      + EAEY A
Subjt:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRA

Query:  MSLGICEEIWLQKV--QYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEI
         +    E IWL++   +  LHQ+      ++CD+ + I ++ N + H RTKH+++
Subjt:  MSLGICEEIWLQKV--QYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.2e-2437.5Show/hide
Query:  LFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SV
        L +T  DI +AV+ +SQFM  P EEH++A+KRILRYL   P  G+  +K +  ++ AY+D+DW     D  ST+GY  ++  + ++W SKK+      S 
Subjt:  LFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SV

Query:  EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
        EAEYR+++    E  W+  +  +L         ++CDN+    +  NPV H R KH+ ID
Subjt:  EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.1e-2233.75Show/hide
Query:  LFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SV
        L +T  D+ +AV+ +SQ+M  P ++H  A+KR+LRYL   P  G+  +K +  ++ AY+D+DW     D  ST+GY  ++  + ++W SKK+      S 
Subjt:  LFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SV

Query:  EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
        EAEYR+++    E  W+  +  +L  +      ++CDN+    +  NPV H R KH+ +D
Subjt:  EAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-2839.76Show/hide
Query:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK--
        + +L+ L  T LDI FAV+ +SQF +AP   H +A+ +IL Y+K   G+GL +       ++ ++D+ +      R+ST+GYC F+  +L++W+SKK+  
Subjt:  MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK--

Query:  ----SVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID
            S EAEYRA+S    E +WL +   +L         LFCDN A I IA N V H+RTKH+E D
Subjt:  ----SVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

ATMG00240.1 Gag-Pol-related retrotransposon family protein5.5e-0936.49Show/hide
Query:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFV
        D+ FAV+ +SQF  A     M+A+ ++L Y+K   G+GL +  T    ++A+ DSDW      R+S +G+C+ V
Subjt:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFV

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-1637.27Show/hide
Query:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRA
        DI +AV++V Q M  P     + +KR+LRY+K     GL   K  +  ++A+ DSDW      R+ST+G+CTF+  N+++W +K++      S E EYRA
Subjt:  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRA

Query:  MSLGICEEIW
        ++L   E  W
Subjt:  MSLGICEEIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAATTGATTGACTTATTTTATACCTGTCTTGATATTTTCTTTGCTGTGAGTGTTGTCAGTCAGTTTATGCAGGCTCCCTATGAAGAACACATGGAAGCTATCAA
AAGAATTTTGAGATACTTAAAAATGATACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAGAAAGACCATTGAAGCATATACTGACTCGGATTGGACAAGATCTGTTG
TTGACAGAAAGTCTACCTCCGGTTATTGTACATTTGTTTGGGGCAATCTTGTAACTTGGAGGAGCAAGAAGAAAAGTGTTGAGGCCGAATATAGAGCTATGAGTTTGGGA
ATATGTGAGGAAATTTGGCTCCAGAAAGTCCAGTATGATCTTCATCAGGAATATGAGACTACATTGAAGCTCTTTTGTGATAATATAGCCATTATTAGTATTGCTAACAA
CCCAGTTCAGCATGACAGAACTAAACATGTTGAGATTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAATTGATTGACTTATTTTATACCTGTCTTGATATTTTCTTTGCTGTGAGTGTTGTCAGTCAGTTTATGCAGGCTCCCTATGAAGAACACATGGAAGCTATCAA
AAGAATTTTGAGATACTTAAAAATGATACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAGAAAGACCATTGAAGCATATACTGACTCGGATTGGACAAGATCTGTTG
TTGACAGAAAGTCTACCTCCGGTTATTGTACATTTGTTTGGGGCAATCTTGTAACTTGGAGGAGCAAGAAGAAAAGTGTTGAGGCCGAATATAGAGCTATGAGTTTGGGA
ATATGTGAGGAAATTTGGCTCCAGAAAGTCCAGTATGATCTTCATCAGGAATATGAGACTACATTGAAGCTCTTTTGTGATAATATAGCCATTATTAGTATTGCTAACAA
CCCAGTTCAGCATGACAGAACTAAACATGTTGAGATTGATTGA
Protein sequenceShow/hide protein sequence
MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLG
ICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID