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Cmc04g0103621 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0103621
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRING-type domain-containing protein
Genome locationCMiso1.1chr04:20795833..20798814
RNA-Seq ExpressionCmc04g0103621
SyntenyCmc04g0103621
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004386 - helicase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134714.1 E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus]1.4e-1994.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
XP_008439873.1 PREDICTED: uncharacterized protein LOC103484529 isoform X1 [Cucumis melo]1.4e-1994.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
XP_008439874.1 PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo]1.4e-1994.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
XP_031743679.1 E3 ubiquitin-protein ligase AIRP2 isoform X2 [Cucumis sativus]1.4e-1994.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
XP_031743680.1 E3 ubiquitin-protein ligase AIRP2 isoform X3 [Cucumis sativus]1.4e-1994.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
TrEMBL top hitse value%identityAlignment
A0A0A0KLG2 RING-type domain-containing protein6.7e-2094.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
A0A1S3AZR9 uncharacterized protein LOC103484529 isoform X26.7e-2094.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
A0A1S3AZT3 uncharacterized protein LOC103484529 isoform X16.7e-2094.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
A0A5D3CPM3 RING finger protein 1416.7e-2094.12Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDI+DMATVTR+NLKRLFKYIDKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
A0A6J1IML8 uncharacterized protein LOC111477841 isoform X28.7e-2092.16Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
        FCRDSLKRVN GDLWVFTDNRDIMDMATVTR+NLKR FKY+DKLPTIVPDS
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS
SwissProt top hitse value%identityAlignment
Q9M022 E3 ubiquitin-protein ligase AIRP25.5e-1156Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
        FCR SLKRVN GDLW++T + +I D+  + ++NLKRL  YIDKLP +  D
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
Arabidopsis top hitse value%identityAlignment
AT3G47160.1 RING/U-box superfamily protein5.4e-1462Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
        FCRDSLKRVN GDLW+  +  D ++M T+ R+N KRLF YI+KLP +VPD
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
AT3G47160.2 RING/U-box superfamily protein5.4e-1462Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
        FCRDSLKRVN GDLW+  +  D ++M T+ R+N KRLF YI+KLP +VPD
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
AT5G01520.1 RING/U-box superfamily protein3.9e-1256Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
        FCR SLKRVN GDLW++T + +I D+  + ++NLKRL  YIDKLP +  D
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
AT5G58787.1 RING/U-box superfamily protein3.2e-1460Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
        FCRDSLKRV+ GDLW+F D  D +++  + R+N KRLF YI+KLP +VPD
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
AT5G58787.2 RING/U-box superfamily protein3.2e-1460Show/hide
Query:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD
        FCRDSLKRV+ GDLW+F D  D +++  + R+N KRLF YI+KLP +VPD
Subjt:  FCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTCGTGACAGTCTTAAAAGAGTAAATCCTGGTGATCTCTGGGTATTTACTGATAACAGGGACATTATGGACATGGCAACGGTGACACGAGATAATTTGAAAAG
GCTTTTCAAGTACATAGATAAATTGCCTACTATTGTTCCAGACTCTTAG
mRNA sequenceShow/hide mRNA sequence
CTTGTTTCGTAGGGCTTCGTATATTGAAAGCATTGAATGAGATAAATCTAGATCTAGAAGCCGCTGGAGTTGTGATTCTCTCAAGAAGTTTCGGTAGATTTCGCCGGCCA
TTCAATCTCATCTTCAGTGGGTAATGTCTGTTAAACAAAAAAAAGGGCTTCAAATAATTCCATTCAACAAGCAATATGATTCATCTAAAGTCACAAATGAGGAACAAATA
AAGAAGAAGAGAAAGCACAGACCTAGCACCCCATCTGGCTAAAAAATGTCCAATGTAAAGACACCGAAGAAGAGAAGAAGAAAGAGGTAGCAGCTATGAAGAAGGAGGAG
GGGACAGAAGCGGCTCCTTCTCCATTACTGTTTTCTTCAATCAATCTCAACTAAATCGTTATATCCAAGAAAAGGGCGAACACGTTCCCAGTCATGCATGTTTTGTCGTG
ACAGTCTTAAAAGAGTAAATCCTGGTGATCTCTGGGTATTTACTGATAACAGGGACATTATGGACATGGCAACGGTGACACGAGATAATTTGAAAAGGCTTTTCAAGTAC
ATAGATAAATTGCCTACTATTGTTCCAGACTCTTAGATAAATTGCCTACTATTGTTCCAGACTCCTTTTTTCGACGCCTATAGTACACACCTAAGATAAGTGATTGGTAC
ACACATAATCTAATATCAATCCTTAAATAGTTTTTCTCCAAATGAACAGTCCTTTTGTTATGATGTGGCATGACAAAACGACCGGAATTCATTCGGCTAAAAGTTAGGAA
GAGTTGGAGAAGACTTGCAACTATTTCTTCCCACTTCCATTTCTAAAGGGAGAAAAAACCAGTCTTTCAGTTATTGTAGACTGGTATTGGGTAGGAAAGTTGATATGGTT
TGATTTAATTCTTTCATAAAAATTGTATTTAAACACATTTGTATGTGTTTGTACATTCTTGATGTTATCTATTAAAGCAGCTTTGAATGCTTAATTTTTAATACGCAAAG
AGATTTTTGGAGTTGACTATGGCTCATAGGGGAGAAGGCATTGAAAGTCAATAGGTGCTATGTCACCCTTTCGACTCATTTAAATTTTTGTTTCAACCGTATGTGTTATT
GTTGTATATGCATTTTTTTTCTTTTAGAGAATAGACATTTGCTGAAATCGGGTTATGTGACTGCTATAAGACCTCCAACTCATGCAGGGAATCTATTTTCAAGCCAAACA
CCATTATGTTGTGAAGCTAAGGGATCGTGTAGATGGCCTGGCGATCGGAATGATTAAAGTCATATCGGGTTGAAAGTTAAGCAATTTTGTAGATAGCCAGACGATCATTA
AAGGTTGAAGGCTCAGAAGGCGTTTAGGATTTCTTATAAGTCTTGTATTAGGATATTTTTTCATGTATCGTTGTAGAATGTATATATAAACACAATATTAAGATTTCATT
TTGTGTATACAAATGTAAAAGATAAATATTATAGTTTTTAAAATAATATTAATTTTATTGATTTGTT
Protein sequenceShow/hide protein sequence
MFCRDSLKRVNPGDLWVFTDNRDIMDMATVTRDNLKRLFKYIDKLPTIVPDS