; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0103781 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0103781
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr04:21012499..21013245
RNA-Seq ExpressionCmc04g0103781
SyntenyCmc04g0103781
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO62209.1 Zinc finger, CCHC-type [Corchorus capsularis]2.5e-9569.76Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        M+ NGFKINECDKCVY K  +ND+V +CLYVDD+ I+GSN  +IK+TK +L +KF+MKDMG+ADVILGIKI +T + ++L+QSHYVD IL+++ K D  +
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
        A+TP+D SLHL KN G+ I+Q+EYS II SLMY+MSCTR DIAY VSKLS +TSNP  DHWKAI+RIL YL++T++YGLHYTRYP VLE YSDANWIS I
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
        KD+KSTSGY F L G  VSWKSSKQT IARSTMESEFIALDK  EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

PSR86206.1 Endonuclease [Actinidia chinensis var. chinensis]5.4e-9869.76Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        ++ +GFKINECDKCVYVK     +V +CLY+DDM+I+GSN  +IK+TK +L +KF+MKDMG+ADVILG+KI++T   L LSQ+HY+D IL K+ K D  +
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
        A+TPID +LHL KN G+  +QLEYS II SLMY+MSCTRPDIAY+VS+LS YTSNPG DHWKAI+R+L YL++T+++GLHYTR+P VLEGY DANWIS +
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
        KDSKSTSGY F+LGG AVSWKSSKQTCIARSTMESEFIALDKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

PSS35063.1 Endonuclease [Actinidia chinensis var. chinensis]5.4e-9869.76Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        ++ +GFKINECDKCVYVK     +V +CLY+DDM+I+GSN  +IK+TK +L +KF+MKDMG+ADVILG+KI++T   L LSQ+HY+D IL K+ K D  +
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
        A+TPID +LHL KN G+  +QLEYS II SLMY+MSCTRPDIAY+VS+LS YTSNPG DHWKAI+R+L YL++T+++GLHYTR+P VLEGY DANWIS +
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
        KDSKSTSGY F+LGG AVSWKSSKQTCIARSTMESEFIALDKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

RVW67960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.6e-10072.98Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        M+ NGFKINECDKCVYVK+ Q  +V VCLYVDDMLIIGS+ N+IK TKQ+L+++F+MKD+GVAD+ILGIK+SKT   L+LSQSHY++ IL+K+KK+DI  
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
         KT +D +LHL KN G   +QLEYS II SLMY+M+CT PDIAY+VSKLS +TSNPG++HWK+I+R+LGYLK+T+NYGLH+TRYP VLEGYSDANWIS  
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
        KDSKSTSGY F LGG AVSWKSSKQTCIARSTMESEFIA+DKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

WP_140189331.1 DDE-type integrase/transposase/recombinase [Xylella fastidiosa]7.1e-9870.16Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        M+ +GF+INECDKCVYVK+    +V +CLYVDDMLI+GSN  +I++TK +L +KF+MKDMG+ADVILG+KI++T   L LSQ+HYVD IL+K+ + D  I
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
        A+TP+D SLHL KN G+ ++QLEYS II SLMY+MSCTRPDIAY+VS+LS YTSNPG DHWKAI+R+L YL++T++ GLHY RYP VLEGY DANWIS +
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
        KDSKSTSGY F LGG AV+WKSSKQTCIARSTMESEFIALDKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

TrEMBL top hitse value%identityAlignment
A0A2N9F5X3 Integrase catalytic domain-containing protein4.8e-10073.39Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        MM NGF+INECDKCVYVK+  + +V VCLYVDDMLI+GSN +IIK TK++L +KF+MKD+GVADVILGIKI++T   L+LSQSHY+  +L+K+ ++D   
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
         KTPID +LHL KN G+ I+QLEYS II SLMYIM+CTRPDIAY+VSKLS YTSNPG+DHWKAI+R+L YLK+T NYG+HYTRYP VLEGYSDANWIS  
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
         D+KSTSGY F LGG AVSWKSSKQTCIARSTMESEFIALDKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

A0A2N9GUH4 Integrase catalytic domain-containing protein6.3e-10072.98Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        MM NGF+INECDKCVYVK+  + +V VCLYVDDMLI+GSN +IIK TK++L +KF+MKD+GVADVILGIKI++T   L+LSQSHY+  +L+K+ ++D   
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
         KTP+D +LHL KN G+ I+QLEYS II SLMYIM+CTRPDIAY+VSKLS YTSNPG+DHWKAI+R+L YLK+T NYG+HYTRYP VLEGYSDANWIS  
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
         D+KSTSGY F LGG AVSWKSSKQTCIARSTMESEFIALDKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

A0A2N9HDE2 Integrase catalytic domain-containing protein6.3e-10072.98Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        MM NGF+INECDKCVYVK+  + +V VCLYVDDMLI+GSN +IIK TK++L +KF+MKD+GVADVILGIKI++T   L+LSQSHY+  +L+K+ ++D   
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
         KTP+D +LHL KN G+ I+QLEYS II SLMYIM+CTRPDIAY+VSKLS YTSNPG+DHWKAI+R+L YLK+T NYG+HYTRYP VLEGYSDANWIS  
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
         D+KSTSGY F LGG AVSWKSSKQTCIARSTMESEFIALDKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

A0A2N9HX08 Integrase catalytic domain-containing protein6.3e-10072.98Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        MM NGF+INECDKCVYVK+  + +V VCLYVDDMLI+GSN +IIK TK++L +KF+MKD+GVADVILGIKI++T   L+LSQSHY+  +L+K+ ++D   
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
         KTP+D +LHL KN G+ I+QLEYS II SLMYIM+CTRPDIAY+VSKLS YTSNPG+DHWKAI+R+L YLK+T NYG+HYTRYP VLEGYSDANWIS  
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
         D+KSTSGY F LGG AVSWKSSKQTCIARSTMESEFIALDKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

A0A438G6X1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-10072.98Show/hide
Query:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI
        M+ NGFKINECDKCVYVK+ Q  +V VCLYVDDMLIIGS+ N+IK TKQ+L+++F+MKD+GVAD+ILGIK+SKT   L+LSQSHY++ IL+K+KK+DI  
Subjt:  MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVI

Query:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI
         KT +D +LHL KN G   +QLEYS II SLMY+M+CT PDIAY+VSKLS +TSNPG++HWK+I+R+LGYLK+T+NYGLH+TRYP VLEGYSDANWIS  
Subjt:  AKTPIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSI

Query:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
        KDSKSTSGY F LGG AVSWKSSKQTCIARSTMESEFIA+DKA EEAE
Subjt:  KDSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.7e-3333.87Show/hide
Query:  FKINECDKCVYV--KSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKT
        F  +  D+C+Y+  K N N++++V LYVDD++I   ++  +   K+ L  KF M D+      +GI+I      + LSQS YV  IL K+   +     T
Subjt:  FKINECDKCVYV--KSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKT

Query:  PIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTR---YPVVLEGYSDANWISSI
        P+ + ++    N D         +I  LMYIM CTRPD+  AV+ LS Y+S    + W+ + R+L YLK T +  L + +   +   + GY D++W  S 
Subjt:  PIDASLHLGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTR---YPVVLEGYSDANWISSI

Query:  KDSKSTSGYTF-ILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEA
         D KST+GY F +     + W + +Q  +A S+ E+E++AL +A  EA
Subjt:  KDSKSTSGYTF-ILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEA

P0CV72 Secreted RxLR effector protein 1613.4e-2647.2Show/hide
Query:  YSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVV-LEGYSDANWISSIKDSKSTSGYTFILGGGAVSWKS
        Y   + ++MY+M  TRPD+A AV  LS + S+P   HW+A+ R+L YL+ T+ YGL +TR     L GYSDA+W   ++  +STSGY F L GG VSW+S
Subjt:  YSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVV-LEGYSDANWISSIKDSKSTSGYTFILGGGAVSWKS

Query:  SKQTCIARSTMESEFIALDKAEEEA
         KQ  +A S+ E E++AL +A +EA
Subjt:  SKQTCIARSTMESEFIALDKAEEEA

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.6e-4440Show/hide
Query:  DKCVYVKS-NQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKI--SKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTPIDAS
        D CVY K  ++N+ + + LYVDDMLI+G +  +I   K  L+  F+MKD+G A  ILG+KI   +T + L LSQ  Y++ +L+++   +     TP+   
Subjt:  DKCVYVKS-NQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKI--SKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTPIDAS

Query:  LHLGK-------NNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSIK
        L L K            +A++ YS  + SLMY M CTRPDIA+AV  +S +  NPG++HW+A+  IL YL+ T    L +     +L+GY+DA+    I 
Subjt:  LHLGK-------NNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSIK

Query:  DSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEE
        + KS++GY F   GGA+SW+S  Q C+A ST E+E+IA  +  +E
Subjt:  DSKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.0e-3033.33Show/hide
Query:  GFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTP
        GF  +  D  ++V       V++ +YVDD+LI G++  ++  T   L+ +F +KD       LGI+  + P  L LSQ  Y+  +L +          TP
Subjt:  GFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTP

Query:  IDASLHLGKNNGDRIAQ-LEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTR-YPVVLEGYSDANWISSIKD
        +  S  L   +G ++    EY  I+ SL Y ++ TRPDI+YAV++LS +   P ++H +A+ RIL YL  T N+G+   +   + L  YSDA+W     D
Subjt:  IDASLHLGKNNGDRIAQ-LEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTR-YPVVLEGYSDANWISSIKD

Query:  SKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
          ST+GY   LG   +SW S KQ  + RS+ E+E+ ++     E +
Subjt:  SKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-3133.33Show/hide
Query:  GFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTP
        GF  +  D  ++V       +++ +YVDD+LI G++  ++K T   L+ +F +K+       LGI+  + PQ L LSQ  Y   +L +          TP
Subjt:  GFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTP

Query:  IDASLHLGKNNGDRIAQ-LEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTR-YPVVLEGYSDANWISSIKD
        +  S  L  ++G ++    EY  I+ SL Y ++ TRPD++YAV++LS Y   P  DHW A+ R+L YL  T ++G+   +   + L  YSDA+W     D
Subjt:  IDASLHLGKNNGDRIAQ-LEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTR-YPVVLEGYSDANWISSIKD

Query:  SKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE
          ST+GY   LG   +SW S KQ  + RS+ E+E+ ++     E +
Subjt:  SKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEEAE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.4e-2731.15Show/hide
Query:  GFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTP
        GF  +  D   ++K      + V +YVDD++I  +N   +   K  L + F+++D+G     LG++I+++   + + Q  Y   +L +        +  P
Subjt:  GFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTP

Query:  IDASLHLGKNN-GDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHY-TRYPVVLEGYSDANWISSIKD
        +D S+    ++ GD +    Y  +I  LMY +  TR DI++AV+KLS ++  P   H +A+++IL Y+K T   GL Y ++  + L+ +SDA++ S    
Subjt:  IDASLHLGKNN-GDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHY-TRYPVVLEGYSDANWISSIKD

Query:  SKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEE
         +ST+GY   LG   +SWKS KQ  +++S+ E+E+ AL  A +E
Subjt:  SKSTSGYTFILGGGAVSWKSSKQTCIARSTMESEFIALDKAEEE

ATMG00240.1 Gag-Pol-related retrotransposon family protein8.9e-0630.26Show/hide
Query:  MSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYT-RYPVVLEGYSDANWISSIKDSKSTSGY
        ++ TRPD+ +AV++LS ++S       +A+ ++L Y+K T   GL Y+    + L+ ++D++W S     +S +G+
Subjt:  MSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYT-RYPVVLEGYSDANWISSIKDSKSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein8.6e-2529.95Show/hide
Query:  VFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTPIDASLHLGKNNGDRIAQLEY
        +++ LYVDD+L+ GS+  ++      L++ F MKD+G     LGI+I   P  L LSQ+ Y + IL      D     TP+   L+   +        ++
Subjt:  VFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTPIDASLHLGKNNGDRIAQLEY

Query:  SCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLH-YTRYPVVLEGYSDANWISSIKDSKSTSGYTFILGGGAVSWKSS
          I+ +L Y ++ TRPDI+YAV+ +      P    +  + R+L Y+K T  +GL+ +    + ++ + D++W       +ST+G+   LG   +SW + 
Subjt:  SCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLH-YTRYPVVLEGYSDANWISSIKDSKSTSGYTFILGGGAVSWKSS

Query:  KQTCIARSTMESEFIAL
        +Q  ++RS+ E+E+ AL
Subjt:  KQTCIARSTMESEFIAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGACAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGTCAAAAGCAATCAGAATGACCATGTCTTTGTGTGCCTATATGTTGATGATATGCTAATTAT
AGGTAGCAATATCAACATTATTAAGACTACCAAACAAATATTGGCCAATAAATTTGAGATGAAAGACATGGGTGTCGCAGATGTTATTTTAGGTATTAAAATTTCTAAAA
CCCCACAATGGTTAATGCTGTCTCAATCACATTATGTTGATACAATATTGAAGAAATATAAAAAACATGACATTGTGATTGCAAAGACCCCAATTGATGCTAGTCTCCAT
TTAGGTAAAAATAATGGAGATAGGATAGCACAATTAGAATACTCTTGCATCATTGATAGTTTAATGTACATTATGAGTTGTACACGTCCTGATATAGCGTATGCTGTAAG
CAAGTTAAGTTGCTATACAAGTAATCCAGGTCAAGATCATTGGAAAGCTATCTTGAGAATTTTAGGATACTTAAAGCATACTAAAAATTATGGATTACACTATACTCGTT
ATCCTGTTGTACTTGAAGGTTATAGTGATGCCAACTGGATATCAAGCATTAAAGACTCCAAATCCACAAGTGGTTACACTTTTATCCTTGGCGGTGGGGCTGTATCTTGG
AAATCTTCCAAACAAACATGTATAGCACGATCTACAATGGAATCTGAATTTATAGCTCTAGACAAGGCTGAGGAAGAAGCAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGACAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGTCAAAAGCAATCAGAATGACCATGTCTTTGTGTGCCTATATGTTGATGATATGCTAATTAT
AGGTAGCAATATCAACATTATTAAGACTACCAAACAAATATTGGCCAATAAATTTGAGATGAAAGACATGGGTGTCGCAGATGTTATTTTAGGTATTAAAATTTCTAAAA
CCCCACAATGGTTAATGCTGTCTCAATCACATTATGTTGATACAATATTGAAGAAATATAAAAAACATGACATTGTGATTGCAAAGACCCCAATTGATGCTAGTCTCCAT
TTAGGTAAAAATAATGGAGATAGGATAGCACAATTAGAATACTCTTGCATCATTGATAGTTTAATGTACATTATGAGTTGTACACGTCCTGATATAGCGTATGCTGTAAG
CAAGTTAAGTTGCTATACAAGTAATCCAGGTCAAGATCATTGGAAAGCTATCTTGAGAATTTTAGGATACTTAAAGCATACTAAAAATTATGGATTACACTATACTCGTT
ATCCTGTTGTACTTGAAGGTTATAGTGATGCCAACTGGATATCAAGCATTAAAGACTCCAAATCCACAAGTGGTTACACTTTTATCCTTGGCGGTGGGGCTGTATCTTGG
AAATCTTCCAAACAAACATGTATAGCACGATCTACAATGGAATCTGAATTTATAGCTCTAGACAAGGCTGAGGAAGAAGCAGAATAA
Protein sequenceShow/hide protein sequence
MMDNGFKINECDKCVYVKSNQNDHVFVCLYVDDMLIIGSNINIIKTTKQILANKFEMKDMGVADVILGIKISKTPQWLMLSQSHYVDTILKKYKKHDIVIAKTPIDASLH
LGKNNGDRIAQLEYSCIIDSLMYIMSCTRPDIAYAVSKLSCYTSNPGQDHWKAILRILGYLKHTKNYGLHYTRYPVVLEGYSDANWISSIKDSKSTSGYTFILGGGAVSW
KSSKQTCIARSTMESEFIALDKAEEEAE