| GenBank top hits | e value | %identity | Alignment |
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| KAA0043008.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.4e-73 | 79.67 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLSEEVY A K FVD H+DHVYKLRKALY LKQA RAW ERL TYLLQQ Y RG A+QTMFIYRQ T+FLIVQIYVDDIIFGGTS Y
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
V++FV QMKGEF+MSMVGELTFFLGFQI QE TGIFFSQEKY KNLI KFG+D A + TPAATHLKMTKDT GEKVD+++Y
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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| KAA0063048.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.1e-68 | 82.93 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLS EVY K FVDSVH DHVYKLRKALYGLKQALRAW ERL TYLLQQGYRRG A+QTMFIYRQ TEFLIVQIYVDDIIFGGTS AY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
VK+FV QMK EFEMSMVGEL+FFLGFQI+QEETGIFFSQEKY NLI KFG+D A+ K TP A+
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
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| KAA0068157.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.9e-98 | 100 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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| TYK16303.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.9e-69 | 83.54 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLS EVY K FVDSVH DHVYKLRKALYGLKQALRAW ERL TYLLQQGYRRG A+QTMFIYRQ TEFLIVQIYVDDIIFGGTS AY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
VK+FV QMK EFEMSMVGEL+FFLGFQI+QEETGIFFSQEKY NLI KFG+D A+ K TPAA+
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
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| TYK21077.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.9e-98 | 100 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJM5 Gag-pol polyprotein | 1.6e-73 | 79.67 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLSEEVY A K FVD H+DHVYKLRKALY LKQA RAW ERL TYLLQQ Y RG A+QTMFIYRQ T+FLIVQIYVDDIIFGGTS Y
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
V++FV QMKGEF+MSMVGELTFFLGFQI QE TGIFFSQEKY KNLI KFG+D A + TPAATHLKMTKDT GEKVD+++Y
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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| A0A5A7V603 Gag-pol polyprotein | 5.5e-69 | 82.93 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLS EVY K FVDSVH DHVYKLRKALYGLKQALRAW ERL TYLLQQGYRRG A+QTMFIYRQ TEFLIVQIYVDDIIFGGTS AY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
VK+FV QMK EFEMSMVGEL+FFLGFQI+QEETGIFFSQEKY NLI KFG+D A+ K TP A+
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
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| A0A5A7VLN8 Gag-pol polyprotein | 4.3e-98 | 100 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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| A0A5D3CWQ1 Gag-pol polyprotein | 1.9e-69 | 83.54 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLS EVY K FVDSVH DHVYKLRKALYGLKQALRAW ERL TYLLQQGYRRG A+QTMFIYRQ TEFLIVQIYVDDIIFGGTS AY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
VK+FV QMK EFEMSMVGEL+FFLGFQI+QEETGIFFSQEKY NLI KFG+D A+ K TPAA+
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAAT
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| A0A5D3DBQ4 Gag-pol polyprotein | 4.3e-98 | 100 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.1e-21 | 34.97 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQN--TEFLIVQIYVDDIIFGGTSF
MDVK+AFLNG L EE+Y + S + D+V KL KA+YGLKQA R W E L + + ++ ++I + E + V +YVDD++
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQN--TEFLIVQIYVDDIIFGGTSF
Query: AYVKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTP
+ F R + +F M+ + E+ F+G +I +E I+ SQ Y K ++ KF ++N A TP
Subjt: AYVKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-21 | 33.53 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYR-QNTEFLIVQIYVDDIIFGGTSFA
+DVK+AFL+G L EE+Y + F + + V KL K+LYGLKQA R W + +++ Q Y + ++ ++ R F+I+ +YVDD++ G
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYR-QNTEFLIVQIYVDDIIFGGTSFA
Query: YVKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETG--IFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTK
+ + + F+M +G LG +I +E T ++ SQEKY + ++ +F + NA+ TP A HLK++K
Subjt: YVKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETG--IFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTK
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 5.8e-07 | 31.03 | Show/hide |
Query: IYVDDIIFGGTSFAYVKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDT
+YVDDI+ G+S + + Q+ F M +G + +FLG QI+ +G+F SQ KY + ++ G+ + + TP L + T
Subjt: IYVDDIIFGGTSFAYVKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.3e-22 | 31.87 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
+DV +AFL G L+++VY + F+D ++V KLRKALYGLKQA RAW L YLL G+ ++ ++F+ ++ + + +YVDDI+ G
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
+ + + F + EL +FLG + ++ TG+ SQ +Y +L+ + + A+ TP A K++ + + D + Y
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-24 | 34.07 | Show/hide |
Query: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
+DV +AFL G L++EVY + FVD D+V +LRKA+YGLKQA RAW L TYLL G+ ++ ++F+ ++ + + +YVDDI+ G
Subjt: MDVKSAFLNGYLSEEVYFANLKDFVDSVHRDHVYKLRKALYGLKQALRAWCERLFTYLLQQGYRRGGANQTMFIYRQNTEFLIVQIYVDDIIFGGTSFAY
Query: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
+K + + F + +L +FLG + ++ G+ SQ +YT +L+ + + A+ TP AT K+T + + D + Y
Subjt: VKRFVRQMKGEFEMSMVGELTFFLGFQIRQEETGIFFSQEKYTKNLILKFGIDNAEAKHTPAATHLKMTKDTTGEKVDSSVY
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