| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 4.5e-196 | 80.41 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKTPKQNKGK
IDEANQVSFIL+SL KSF+PFQTNASLNKIEFNLT LLNELQRFQNLT KGKEVEANVA TKRKF RGSSSK+K GPSK+ K KK KGK P +K K
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKTPKQNKGK
Query: KTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMVSAKAVGD
K A++GKC+HC ++GHW RNCPKYLA+KKAEK QGK DLL + TCLVE + STWILDSGATNHICFSFQETSSWK L EGEITLKVGTGE+VSA+AVGD
Subjt: KTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMVSAKAVGD
Query: LKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVSFNAFLWH
L LFF DRY+ILK+VLY P MKRNLISI+C+LEH+Y ISFE+NE FIL KGI ICS I ENNLYKLRPTRAN VLNTEMFRT+ET NK+QKVS NA+LWH
Subjt: LKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVSFNAFLWH
Query: LRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVYLIQNKFDSF
LRL HINLNRI RLVKSG+L+QLEDNSLP C+SCLEGKMTKRSF GKGLRAK+PLELVHSDLCGPMNVKA GGYEYFI+FIDD+SRYGHVYL+ +K +SF
Subjt: LRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVYLIQNKFDSF
Query: EKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
EKFKEYKAEV+NE GKTIKT RSDRGGEYMD +FQDYLI
Subjt: EKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 7.6e-151 | 63.84 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
KKT A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHSDLCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-151 | 63.17 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
K A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L+ +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHS+LCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-151 | 63.39 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
K A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHSDLCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 7.6e-151 | 63.84 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
KKT A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHSDLCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 4.8e-151 | 63.39 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
K A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHSDLCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| A0A5A7V4M1 Gag/pol protein | 4.8e-151 | 63.39 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
K A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: ------KKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHSDLCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| A0A5D3CPJ6 Gag/pol protein | 3.7e-151 | 63.84 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
KKT A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHSDLCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| A0A5D3CSZ6 Gag/pol protein | 3.7e-151 | 63.84 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
IDEA+QVSFILESL +SF+ F++NA +NKI + LT LLNELQ F++L K KG++ EANVAT+ RKF RGS+S +K+ PS S N+K +KK+ G+ K N
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKS-NRKIEKKRKGKTPKQNKG
Query: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
KKT A +G C+HC + GHW RNCPKYLA+KK K +QGK DLL L TCLVEN++S WI+DSGATNH+C SFQ SSW+ L GE+T++VGTG +V
Subjt: -----KKT-AEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMV
Query: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
SA AVG L+L +++L+NV P +KRNLIS+ CLLE Y ++F +N+ FI + G+ ICS LENNLY LR + +LNTEMF+T T NKR K+S
Subjt: SAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVS
Query: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
NA LWHLRL HINLNRI RLVK+GLLS+LE+NSLP+C+SCLEGKMTKR F GKG RAK PLELVHSDLCGPMNVKA GG+EYFITF DDYSRYG+VY
Subjt: --FNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVY
Query: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
L+Q+K ++ EKFKEYKAEV+N KTIKTFRSDRGGEYMDL+FQ+YL+
Subjt: LIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| E2GK51 Gag/pol protein (Fragment) | 2.2e-196 | 80.41 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKTPKQNKGK
IDEANQVSFIL+SL KSF+PFQTNASLNKIEFNLT LLNELQRFQNLT KGKEVEANVA TKRKF RGSSSK+K GPSK+ K KK KGK P +K K
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKTPKQNKGK
Query: KTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMVSAKAVGD
K A++GKC+HC ++GHW RNCPKYLA+KKAEK QGK DLL + TCLVE + STWILDSGATNHICFSFQETSSWK L EGEITLKVGTGE+VSA+AVGD
Subjt: KTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKVGTGEMVSAKAVGD
Query: LKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVSFNAFLWH
L LFF DRY+ILK+VLY P MKRNLISI+C+LEH+Y ISFE+NE FIL KGI ICS I ENNLYKLRPTRAN VLNTEMFRT+ET NK+QKVS NA+LWH
Subjt: LKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFRTVETHNKRQKVSFNAFLWH
Query: LRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVYLIQNKFDSF
LRL HINLNRI RLVKSG+L+QLEDNSLP C+SCLEGKMTKRSF GKGLRAK+PLELVHSDLCGPMNVKA GGYEYFI+FIDD+SRYGHVYL+ +K +SF
Subjt: LRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITFIDDYSRYGHVYLIQNKFDSF
Query: EKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
EKFKEYKAEV+NE GKTIKT RSDRGGEYMD +FQDYLI
Subjt: EKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.3e-24 | 27.81 | Show/hide |
Query: KKRKGKTPKQNKGKKTAEEGKCYHCGKNGHWLRNCPKY---LAQKKAEKKEQGKCDLLFLVTCLVENENST-------WILDSGATNHICFSFQETSSWK
K R K K KG + + KC+HCG+ GH ++C Y L K E ++Q + + +V+ N+T ++LDSGA++H+ + S +
Subjt: KKRKGKTPKQNKGKKTAEEGKCYHCGKNGHWLRNCPKY---LAQKKAEKKEQGKCDLLFLVTCLVENENST-------WILDSGATNHICFSFQETSSWK
Query: MLSEGEITLKVGT---GEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANF
E LK+ GE + A G ++L ND I L++VL+ + NL+S+ L E I F+ + G+ TI +N L ++ +
Subjt: MLSEGEITLKVGT---GEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANF
Query: VLNTEMFRTVETHNKRQKVSFNAFLWHLRLDHIN------LNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSF--IGKGLRAKMPLELVHSDLCGP
+LN + ++ K N LWH R HI+ + R LL+ LE S +C+ CL GK + F + K PL +VHSD+CGP
Subjt: VLNTEMFRTVETHNKRQKVSFNAFLWHLRLDHIN------LNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSF--IGKGLRAKMPLELVHSDLCGP
Query: MNVKAWGGYEYFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
+ YF+ F+D ++ Y YLI+ K D F F+++ A+ + + D G EY+ + + +
Subjt: MNVKAWGGYEYFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYLI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-34 | 27.71 | Show/hide |
Query: VQIDEANQVSFILESLSKSFIPFQTNASLNKIEFNL-----TILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKT
V+I+E ++ +L SL S+ T K L +LLNE R + +G+ E R ++R S++ ++G +GK+
Subjt: VQIDEANQVSFILESLSKSFIPFQTNASLNKIEFNL-----TILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKT
Query: PKQNKGKKTAEEGKCYHCGKNGHWLRNCP---KYLAQKKAEKKEQGKCDL--------LFL---VTCL-VENENSTWILDSGATNHICFSFQETSSWKML
++K + CY+C + GH+ R+CP K + +K + + LF+ C+ + S W++D+ A++H + +
Subjt: PKQNKGKKTAEEGKCYHCGKNGHWLRNCP---KYLAQKKAEKKEQGKCDL--------LFL---VTCL-VENENSTWILDSGATNHICFSFQETSSWKML
Query: SEGEI-TLKVGTGEMVSAKAVGDLKLFFN-DRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKG-IHICSTILENNLYKLRPTRANFVL
G+ T+K+G +GD+ + N ++LK+V + P ++ NLIS L Y S+ N+ + L KG + I + LY+
Subjt: SEGEI-TLKVGTGEMVSAKAVGDLKLFFN-DRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKG-IHICSTILENNLYKLRPTRANFVL
Query: NTEMFRTVETHNKRQKVSFNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYE
N E+ + E + + ++S + LWH R+ H++ + L K L+S + ++ CD CL GK + SF R L+LV+SD+CGPM +++ GG +
Subjt: NTEMFRTVETHNKRQKVSFNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYE
Query: YFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDY
YF+TFIDD SR VY+++ K F+ F+++ A V+ E+G+ +K RSD GGEY F++Y
Subjt: YFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDY
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| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 1.2e-05 | 21.49 | Show/hide |
Query: VQIDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSK--SKAGPSKSNRKIEKKRKGKT---
+ + + IL+ LS F + N K L+ L E+Q L + K + N + ++K+ S K S+ P+ +N K+ + +T
Subjt: VQIDEANQVSFILESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSSSK--SKAGPSKSNRKIEKKRKGKT---
Query: -PKQNKGKKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENST---WILDSGATNHICFSFQETSSWKMLSEGEITLKVGT
P+ K A K + N H + + G+ T +++ + ++DSGA+ + S EI +
Subjt: -PKQNKGKKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDLLFLVTCLVENENST---WILDSGATNHICFSFQETSSWKMLSEGEITLKVGT
Query: GEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFR-TVETHNK
+ + A+G+L F + L+ P + +L+S+S L F N G + + + Y L +++ + + + T+ NK
Subjt: GEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLEHMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFR-TVETHNK
Query: RQKVSFNAF-LWHLRLDHINLNRIGRLVKSGLLSQLEDNSLP-------LCDSCLEGKMTKRSFIGKGLRAKM-----PLELVHSDLCGPMNVKAWGGYE
+ V+ + L H L H N I + +K ++ L+++ + C CL GK TK I KG R K P + +H+D+ GP++
Subjt: RQKVSFNAF-LWHLRLDHINLNRIGRLVKSGLLSQLEDNSLP-------LCDSCLEGKMTKRSFIGKGLRAKM-----PLELVHSDLCGPMNVKAWGGYE
Query: YFITFIDDYSRYGHVYLIQNKFDS--FEKFKEYKAEVKNESGKTIKTFRSDRGGEY
YFI+F D+ +R+ VY + ++ + F A +KN+ + + DRG EY
Subjt: YFITFIDDYSRYGHVYLIQNKFDS--FEKFKEYKAEVKNESGKTIKTFRSDRGGEY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.1e-18 | 23.41 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLT----ILLNELQRFQNLTKGKGKEVEANV-----ATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKG
+D QV +LE+L + + P + LT LLN + ++ + AN TT G+ + + +N ++
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLT----ILLNELQRFQNLTKGKGKEVEANV-----ATTKRKFKRGSSSKSKAGPSKSNRKIEKKRKG
Query: KTPKQNKGKKTAEEGKCYHCGKNGHWLRNCPK---YLAQKKAEKKE------QGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGE
N + GKC CG GH + C + +L+ +++ Q + +L ++ W+LDSGAT+HI F S + + G+
Subjt: KTPKQNKGKKTAEEGKCYHCGKNGHWLRNCPK---YLAQKKAEKKE------QGKCDLLFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGE
Query: ITLKVGTGEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLE------HMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLN
+ V G + G L R + L N+LY P + +NLIS+ L + SF++ + L G+ + ++ LY+ + V
Subjt: ITLKVGTGEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLE------HMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLN
Query: TEMFRTVETHNKRQKVSFNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPL-CDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYE
+ TH+ WH RL H + + ++ + LS L + L C CL K K F + + PLE ++SD+ + + Y
Subjt: TEMFRTVETHNKRQKVSFNAFLWHLRLDHINLNRIGRLVKSGLLSQLEDNSLPL-CDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYE
Query: YFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDL
Y++ F+D ++RY +Y ++ K E F +K ++N I TF SD GGE++ L
Subjt: YFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.2e-19 | 23.58 | Show/hide |
Query: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLT----ILLNELQRFQNLTKGKGKEVEANVAT---TKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKT
+D QV +LE+L + P + +LT L+N + L + + ANV T T + + ++ + +NR +
Subjt: IDEANQVSFILESLSKSFIPFQTNASLNKIEFNLT----ILLNELQRFQNLTKGKGKEVEANVAT---TKRKFKRGSSSKSKAGPSKSNRKIEKKRKGKT
Query: PKQNKGKKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDL------LFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKV
+ + + G+C C GH + CP+ + ++Q L N N+ W+LDSGAT+HI F S + + G+ + +
Subjt: PKQNKGKKTAEEGKCYHCGKNGHWLRNCPKYLAQKKAEKKEQGKCDL------LFLVTCLVENENSTWILDSGATNHICFSFQETSSWKMLSEGEITLKV
Query: GTGEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLE------HMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFR
G + G L + R + L VLY P + +NLIS+ L + SF++ + L G+ + ++ LY+ + V
Subjt: GTGEMVSAKAVGDLKLFFNDRYIILKNVLYAPQMKRNLISISCLLE------HMYRISFEINEGFILRKGIHICSTILENNLYKLRPTRANFVLNTEMFR
Query: TVETHNKRQKVSFNAFLWHLRLDHINLNRIGRLVKSGLLSQLE-DNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITF
+ TH+ WH RL H +L + ++ + L L + L C C K K F + + PLE ++SD+ + + Y Y++ F
Subjt: TVETHNKRQKVSFNAFLWHLRLDHINLNRIGRLVKSGLLSQLE-DNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLELVHSDLCGPMNVKAWGGYEYFITF
Query: IDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYL
+D ++RY +Y ++ K + F +K+ V+N I T SD GGE++ LR DYL
Subjt: IDDYSRYGHVYLIQNKFDSFEKFKEYKAEVKNESGKTIKTFRSDRGGEYMDLRFQDYL
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