| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.8e-170 | 84.02 | Show/hide |
Query: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
VD P+ KPIGCKWIYKRKRDQAGKVQTFKA+LV K YTQKEGVDYEETFSPVAMLKSIRILLSIATFY+YEIWQMDV TAFLN L+ESIYMVQPEGFI
Subjt: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
Query: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYG EQNVDEPCVYK+I+NS VAFLILYVDDILLIGNDV +LTD+KKWL TQFQMKDLG AQ +LG
Subjt: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
Query: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
IQIV+NRKNKTLAMSQ SYIDK+LSRYKMQNSK G L + + IHL KEQC KTPQ+VEDM NIPY+S V SLMYAMLCTRPDICYSVG+VSRYQS PG D
Subjt: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
Query: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
HWT +KNI KYLRRT++YML+Y +KDLILTGY DSDFQSDKDARKSTSGSVFTLNGGAVVWR+
Subjt: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-162 | 77.84 | Show/hide |
Query: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
F + VD P G KPIGCKWIYKRKRD AGKVQTFKA+LV K YTQ+EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDV TAFLN L+ESI+M
Subjt: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
Query: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
QPEGFI QKVCKL +SIYGLKQASRSWNIRFDTAIKSYG +QNVDEPCVYK+I VAFL+LYVDDILLIGNDVG+LTD+K WLA QFQMKDLG
Subjt: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
Query: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
AQ VLGIQI+++RKNKTLA+SQ +YIDK+L RY MQNSK GLL + + +HL KEQ KTPQ+VEDM IPYAS V SLMYAMLCTRPDICY+VG+VSRY
Subjt: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
Query: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
QS PG DHWT +K + KYLRRT+DYML+Y +KDLILTGY DSDFQ+DKD+RKSTSGSVFTLNGGAVVWR+
Subjt: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-162 | 77.84 | Show/hide |
Query: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
F + VD P G KPIGCKWIYKRKRD AGKVQTFKA+LV K YTQ+EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDV TAFLN L+ESI+M
Subjt: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
Query: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
QPEGFI QKVCKL +SIYGLKQASRSWNIRFDTAIKSYG +QNVDEPCVYK+I VAFL+LYVDDILLIGNDVG+LTD+K WLA QFQMKDLG
Subjt: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
Query: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
AQ VLGIQI+++RKNKTLA+SQ +YIDK+L RY MQNSK GLL + + +HL KEQ KTPQ+VEDM IPYAS V SLMYAMLCTRPDICY+VG+VSRY
Subjt: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
Query: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
QS PG DHWT +K + KYLRRT+DYML+Y +KDLILTGY DSDFQ+DKD+RKSTSGSVFTLNGGAVVWR+
Subjt: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| KAA0062993.1 gag/pol protein [Cucumis melo var. makuwa] | 6.5e-159 | 76.76 | Show/hide |
Query: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
F D VDQP+G KPIGCKWIYKRKR GKVQTFKA+LV K YTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDV TAFLN L+E+IYM
Subjt: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
Query: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
QPEGFI QK+CKL +SIYGLKQASRSWNIRFDTAIKSYG Q VDEPCVYKRIIN +VAFL+LYVDDILLIGND+G LTDIK+WLATQFQMKDLG
Subjt: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
Query: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
AQ VLGIQI ++RKNK LA+SQ SYIDK++ +Y MQNSK GLL + + + L KEQC KTPQ VE+M +IPYAS V+SLMYAMLCTRPDICY+VG+VSRY
Subjt: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
Query: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
QS PG HWT +K I KYLRRT+DYML+Y SKDLILTGY DSDFQ+D+D+RKSTSGSVFTLNGGAVVWR+
Subjt: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-167 | 83.47 | Show/hide |
Query: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
VDQPN KPIGCKWIYKRKRDQAGKVQTFKA+LV K YTQKEG+DYEE FS AM+KSIRILLSIATFYDYEIWQMDV T FLN L+ESIYMVQPE FI
Subjt: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
Query: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
QK+CKLQKSIYGLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NSTVAFL+LYVDDILLIGNDVGHL DIKKWLA QFQMKDLGNAQ VLG
Subjt: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
Query: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
+QIV+NRKNKTLAMSQTSYIDKMLSRYKM NSK GLL Y Y IHL KEQC KTPQ+VEDMSNIPYAS V SLMY MLCTRP+ICYSVG+VSR QS PG D
Subjt: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
Query: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
HWT +KNI KYLRRT+DYML+Y SKDLILTGY D FQ+DKDARKSTSG VFT+NGGAVVWR+
Subjt: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 1.8e-162 | 77.84 | Show/hide |
Query: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
F + VD P G KPIGCKWIYKRKRD AGKVQTFKA+LV K YTQ+EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDV TAFLN L+ESI+M
Subjt: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
Query: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
QPEGFI QKVCKL +SIYGLKQASRSWNIRFDTAIKSYG +QNVDEPCVYK+I VAFL+LYVDDILLIGNDVG+LTD+K WLA QFQMKDLG
Subjt: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
Query: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
AQ VLGIQI+++RKNKTLA+SQ +YIDK+L RY MQNSK GLL + + +HL KEQ KTPQ+VEDM IPYAS V SLMYAMLCTRPDICY+VG+VSRY
Subjt: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
Query: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
QS PG DHWT +K + KYLRRT+DYML+Y +KDLILTGY DSDFQ+DKD+RKSTSGSVFTLNGGAVVWR+
Subjt: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| A0A5A7UYE8 Gag/pol protein | 1.8e-162 | 77.84 | Show/hide |
Query: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
F + VD P G KPIGCKWIYKRKRD AGKVQTFKA+LV K YTQ+EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDV TAFLN L+ESI+M
Subjt: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
Query: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
QPEGFI QKVCKL +SIYGLKQASRSWNIRFDTAIKSYG +QNVDEPCVYK+I VAFL+LYVDDILLIGNDVG+LTD+K WLA QFQMKDLG
Subjt: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
Query: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
AQ VLGIQI+++RKNKTLA+SQ +YIDK+L RY MQNSK GLL + + +HL KEQ KTPQ+VEDM IPYAS V SLMYAMLCTRPDICY+VG+VSRY
Subjt: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
Query: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
QS PG DHWT +K + KYLRRT+DYML+Y +KDLILTGY DSDFQ+DKD+RKSTSGSVFTLNGGAVVWR+
Subjt: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| A0A5A7V4M1 Gag/pol protein | 3.1e-159 | 76.76 | Show/hide |
Query: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
F D VDQP+G KPIGCKWIYKRKR GKVQTFKA+LV K YTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDV TAFLN L+E+IYM
Subjt: FQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYM
Query: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
QPEGFI QK+CKL +SIYGLKQASRSWNIRFDTAIKSYG Q VDEPCVYKRIIN +VAFL+LYVDDILLIGND+G LTDIK+WLATQFQMKDLG
Subjt: VQPEGFI-----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLG
Query: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
AQ VLGIQI ++RKNK LA+SQ SYIDK++ +Y MQNSK GLL + + + L KEQC KTPQ VE+M +IPYAS V+SLMYAMLCTRPDICY+VG+VSRY
Subjt: NAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRY
Query: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
QS PG HWT +K I KYLRRT+DYML+Y SKDLILTGY DSDFQ+D+D+RKSTSGSVFTLNGGAVVWR+
Subjt: QSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| A0A5D3BX45 Gag/pol protein | 1.8e-167 | 83.47 | Show/hide |
Query: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
VDQPN KPIGCKWIYKRKRDQAGKVQTFKA+LV K YTQKEG+DYEE FS AM+KSIRILLSIATFYDYEIWQMDV T FLN L+ESIYMVQPE FI
Subjt: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
Query: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
QK+CKLQKSIYGLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NSTVAFL+LYVDDILLIGNDVGHL DIKKWLA QFQMKDLGNAQ VLG
Subjt: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
Query: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
+QIV+NRKNKTLAMSQTSYIDKMLSRYKM NSK GLL Y Y IHL KEQC KTPQ+VEDMSNIPYAS V SLMY MLCTRP+ICYSVG+VSR QS PG D
Subjt: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
Query: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
HWT +KNI KYLRRT+DYML+Y SKDLILTGY D FQ+DKDARKSTSG VFT+NGGAVVWR+
Subjt: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| E2GK51 Gag/pol protein (Fragment) | 1.4e-170 | 84.02 | Show/hide |
Query: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
VD P+ KPIGCKWIYKRKRDQAGKVQTFKA+LV K YTQKEGVDYEETFSPVAMLKSIRILLSIATFY+YEIWQMDV TAFLN L+ESIYMVQPEGFI
Subjt: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGFI
Query: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYG EQNVDEPCVYK+I+NS VAFLILYVDDILLIGNDV +LTD+KKWL TQFQMKDLG AQ +LG
Subjt: -----QKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLG
Query: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
IQIV+NRKNKTLAMSQ SYIDK+LSRYKMQNSK G L + + IHL KEQC KTPQ+VEDM NIPY+S V SLMYAMLCTRPDICYSVG+VSRYQS PG D
Subjt: IQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCD
Query: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
HWT +KNI KYLRRT++YML+Y +KDLILTGY DSDFQSDKDARKSTSGSVFTLNGGAVVWR+
Subjt: HWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.4e-57 | 36.12 | Show/hide |
Query: QPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGF---
+P + +W++ K ++ G +KA+LV + +TQK +DYEETF+PVA + S R +LS+ Y+ ++ QMDV TAFLN LKE IYM P+G
Subjt: QPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGF---
Query: IQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVY---KRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLGI
VCKL K+IYGLKQA+R W F+ A+K + + C+Y K IN + +++LYVDD+++ D+ + + K++L +F+M DL + +GI
Subjt: IQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVY---KRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLGI
Query: QIVQNRKNKTLAMSQTSYIDKMLSRYKMQNS---KMGLLSYI-YEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIP
+I + + +SQ++Y+ K+LS++ M+N L S I YE+ E C N P S++ LMY MLCTRPD+ +V ++SRY S
Subjt: QIVQNRKNKTLAMSQTSYIDKMLSRYKMQNS---KMGLLSYI-YEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIP
Query: GCDHWTVIKNIQKYLRRTQDYMLLYDSKDLI----LTGYIDSDFQSDKDARKSTSGSVFTL-NGGAVVWRT
+ W +K + +YL+ T D L++ K+L + GY+DSD+ + RKST+G +F + + + W T
Subjt: GCDHWTVIKNIQKYLRRTQDYMLLYDSKDLI----LTGYIDSDFQSDKDARKSTSGSVFTL-NGGAVVWRT
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.2e-88 | 45.33 | Show/hide |
Query: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGF-
V+ P G +P+ CKW++K K+D K+ +KA+LV K + QK+G+D++E FSPV + SIR +LS+A D E+ Q+DV TAFL+ L+E IYM QPEGF
Subjt: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAFLNEYLKESIYMVQPEGF-
Query: ----IQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVY-KRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVL
VCKL KS+YGLKQA R W ++FD+ +KS + +PCVY KR + L+LYVDD+L++G D G + +K L+ F MKDLG AQ +L
Subjt: ----IQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVY-KRIINSTVAFLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVL
Query: GIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGC
G++IV+ R ++ L +SQ YI+++L R+ M+N+K + L K+ C T ++ +M+ +PY+S V SLMYAM+CTRPDI ++VG+VSR+ PG
Subjt: GIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGC
Query: DHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
+HW +K I +YLR T L + D IL GY D+D D D RKS++G +FT +GGA+ W++
Subjt: DHWTVIKNIQKYLRRTQDYMLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.5e-28 | 31.71 | Show/hide |
Query: MDVNTAFLNEYLKESIYMVQPEGFIQK-----VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGH
MDV+TAFLN + E IY+ QP GF+ + V +L +YGLKQA WN + +K G ++ E +Y R + ++ +YVDD+L+
Subjt: MDVNTAFLNEYLKESIYMVQPEGFIQK-----VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGH
Query: LTDIKKWLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYA
+K+ L + MKDLG LG+ I Q+ N + +S YI K S ++ K+ L + T ++D++ PY S+V L++
Subjt: LTDIKKWLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYA
Query: MLCTRPDICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDYMLLYDS-KDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVW
RPDI Y V ++SR+ P H + + +YL T+ L Y S L LT Y D+ + D ST G V L G V W
Subjt: MLCTRPDICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDYMLLYDS-KDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-49 | 33.95 | Show/hide |
Query: SLGPRIGIYVFQFCMDSV-DQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAF
++G I + D V P+ +GC+WI+ +K + G + +KA+LV K Y Q+ G+DY ETFSPV SIRI+L +A + I Q+DVN AF
Subjt: SLGPRIGIYVFQFCMDSV-DQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTAF
Query: LNEYLKESIYMVQPEGFIQK-----VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKW
L L + +YM QP GFI K VCKL+K++YGLKQA R+W + + + G +V + ++ ++ ++++YVDDIL+ GND L +
Subjt: LNEYLKESIYMVQPEGFIQK-----VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKKW
Query: LATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPD
L+ +F +KD LGI+ R L +SQ YI +L+R M +K L K E Y +V SL Y + TRPD
Subjt: LATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRPD
Query: ICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDY-MLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVW
I Y+V +S++ +P +H +K I +YL T ++ + L L L Y D+D+ DKD ST+G + L + W
Subjt: ICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDY-MLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVW
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.9e-53 | 34.12 | Show/hide |
Query: QSLGPRIGIYVFQFCMDSVDQPNGAKPI-GCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTA
Q++G I + D V P + I GC+WI+ +K + G + +KA+LV K Y Q+ G+DY ETFSPV SIRI+L +A + I Q+DVN A
Subjt: QSLGPRIGIYVFQFCMDSVDQPNGAKPI-GCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNTA
Query: FLNEYLKESIYMVQPEGFIQK-----VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKK
FL L + +YM QP GF+ K VC+L+K+IYGLKQA R+W + T + + G ++ + ++ ++ ++++YVDDIL+ GND L
Subjt: FLNEYLKESIYMVQPEGFIQK-----VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHLTDIKK
Query: WLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRP
L+ +F +K+ + LGI+ R + L +SQ Y +L+R M +K L K P E Y +V SL Y + TRP
Subjt: WLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAMLCTRP
Query: DICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDY-MLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVW
D+ Y+V +S+Y +P DHW +K + +YL T D+ + L L L Y D+D+ D D ST+G + L + W
Subjt: DICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDY-MLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVW
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.7e-53 | 31.19 | Show/hide |
Query: MDQSLGPRIGIYVFQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNT
MD +G + ++ C P KPIGCKW+YK K + G ++ +KA+LV K YTQ+EG+D+ ETFSPV L S++++L+I+ Y++ + Q+D++
Subjt: MDQSLGPRIGIYVFQFCMDSVDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVNT
Query: AFLNEYLKESIYMVQPEGFIQK---------VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHL
AFLN L E IYM P G+ + VC L+KSIYGLKQASR W ++F + +G Q+ + + +I + +++YVDDI++ N+ +
Subjt: AFLNEYLKESIYMVQPEGFIQK---------VCKLQKSIYGLKQASRSWNIRFDTAIKSYGCEQNVDEPCVYKRIINSTVAFLILYVDDILLIGNDVGHL
Query: TDIKKWLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAM
++K L + F+++DLG + LG++I R + + Q Y +L + K + + + + Y ++ LMY
Subjt: TDIKKWLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQVEDMSNIPYASVVESLMYAM
Query: LCTRPDICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSK-DLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
+ TR DI ++V +S++ P H + I Y++ T L Y S+ ++ L + D+ FQS KD R+ST+G L + W++
Subjt: LCTRPDICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDYMLLYDSK-DLILTGYIDSDFQSDKDARKSTSGSVFTLNGGAVVWRT
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 2.3e-13 | 30.24 | Show/hide |
Query: FLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQV
+L+LYVDDILL G+ L + L++ F MKDLG LGIQI + L +SQT Y +++L+ M + K + LK + +
Subjt: FLILYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQDVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSKMGLLSYIYEIHLLKEQCLKTPQQV
Query: EDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDY-MLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNG
D S+ + S+V +L Y L TRPDI Y+V +V + P + ++K + +Y++ T + + ++ + L + + DSD+ R+ST+G L
Subjt: EDMSNIPYASVVESLMYAMLCTRPDICYSVGMVSRYQSIPGCDHWTVIKNIQKYLRRTQDY-MLLYDSKDLILTGYIDSDFQSDKDARKSTSGSVFTLNG
Query: GAVVW
+ W
Subjt: GAVVW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.9e-08 | 39.39 | Show/hide |
Query: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIA
V P +GCKW++K K G + KA+LV K + Q+EG+ + ET+SPV +IR +L++A
Subjt: VDQPNGAKPIGCKWIYKRKRDQAGKVQTFKAQLVEKCYTQKEGVDYEETFSPVAMLKSIRILLSIA
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