| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.2e-66 | 86.84 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVD DQWIKAM+ EMESMY NSVWTLVD P+DVKPI CKWIYKRKRDQAGKVQTFKARLVAK YTQKEG+DYEETFS VAM+KSIRILLSI TFY+YE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
IWQM+VKT FLNGNLEESIYMVQPE FI + QEQKVCKLQKSIYGLKQASRS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| KAA0043610.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-63 | 83.55 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVDCDQW+KAMD ++ESMYSNSVWTLVDQ NDVK I CKWIYKRKRDQAGKVQTFKARLV K Y +KEG++Y+ETFS V M+KSIRILLSI TFYDYE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
I QM+VKT FLNGNLEESIYMVQPE FIQK QEQKV KLQKSIYGLKQASRS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| KAA0045201.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-63 | 78.95 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVD DQW KAM+ EM+SMY NS+WTL+DQPND++PI CKWIYKRK+DQ GKVQTFKA+LVAK YTQ+EG+DY+ETFS VAM+KSIRILLSIVTFYDYE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
IW M+VKT F+NGNLEESIYM QP+ FI+++QEQKVCKLQKSIYGLKQA RS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-68 | 88 | Show/hide |
Query: DVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIW
DVD DQWIKAMD +MESMYSNSVWTLVDQPN+++PI CKWIYKRKRDQ KVQTF+ARLVAK YTQKEGIDYEETFS +AMIKSIRILLSI TFYDYEIW
Subjt: DVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIW
Query: QMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
QM+VKT FLNGNLEESIYMVQPE FIQK QEQKVCKLQKSIYGLKQASRS
Subjt: QMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 5.5e-69 | 90.79 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVD DQWIKAMD EMESMYSNSVWTLVDQPNDVKPI CKWIYKRKRDQAGKVQTFKARLVAK YTQKEGIDYEE FS AMIKSIRILLSI TFYDYE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
IWQM+VKTTFLN NLEESIYMVQPE FIQK QEQK+CKLQKSIYGLKQASRS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TK28 Gag/pol protein | 1.7e-63 | 83.55 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVDCDQW+KAMD ++ESMYSNSVWTLVDQ NDVK I CKWIYKRKRDQAGKVQTFKARLV K Y +KEG++Y+ETFS V M+KSIRILLSI TFYDYE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
I QM+VKT FLNGNLEESIYMVQPE FIQK QEQKV KLQKSIYGLKQASRS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| A0A5A7TTA2 Gag/pol protein | 1.7e-68 | 88 | Show/hide |
Query: DVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIW
DVD DQWIKAMD +MESMYSNSVWTLVDQPN+++PI CKWIYKRKRDQ KVQTF+ARLVAK YTQKEGIDYEETFS +AMIKSIRILLSI TFYDYEIW
Subjt: DVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIW
Query: QMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
QM+VKT FLNGNLEESIYMVQPE FIQK QEQKVCKLQKSIYGLKQASRS
Subjt: QMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| A0A5D3BX45 Gag/pol protein | 2.7e-69 | 90.79 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVD DQWIKAMD EMESMYSNSVWTLVDQPNDVKPI CKWIYKRKRDQAGKVQTFKARLVAK YTQKEGIDYEE FS AMIKSIRILLSI TFYDYE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
IWQM+VKTTFLN NLEESIYMVQPE FIQK QEQK+CKLQKSIYGLKQASRS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| A0A5D3DVP2 Gag/pol protein | 1.7e-63 | 78.95 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVD DQW KAM+ EM+SMY NS+WTL+DQPND++PI CKWIYKRK+DQ GKVQTFKA+LVAK YTQ+EG+DY+ETFS VAM+KSIRILLSIVTFYDYE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
IW M+VKT F+NGNLEESIYM QP+ FI+++QEQKVCKLQKSIYGLKQA RS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| E2GK51 Gag/pol protein (Fragment) | 5.6e-67 | 86.84 | Show/hide |
Query: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
M DVD DQWIKAM+ EMESMY NSVWTLVD P+DVKPI CKWIYKRKRDQAGKVQTFKARLVAK YTQKEG+DYEETFS VAM+KSIRILLSI TFY+YE
Subjt: MYDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYE
Query: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
IWQM+VKT FLNGNLEESIYMVQPE FI + QEQKVCKLQKSIYGLKQASRS
Subjt: IWQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.2e-28 | 44 | Show/hide |
Query: YDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEI
Y D W +A++ E+ + N+ WT+ +P + +D +W++ K ++ G +KARLVA+ +TQK IDYEETF+ VA I S R +LS+V Y+ ++
Subjt: YDVDCDQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEI
Query: WQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASR
QM+VKT FLNG L+E IYM P+ VCKL K+IYGLKQA+R
Subjt: WQMNVKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-33 | 49.66 | Show/hide |
Query: DQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIWQMNV
+Q +KAM EMES+ N + LV+ P +P+ CKW++K K+D K+ +KARLV K + QK+GID++E FS V + SIR +LS+ D E+ Q++V
Subjt: DQWIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIWQMNV
Query: KTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASR
KT FL+G+LEE IYM QPE F ++ VCKL KS+YGLKQA R
Subjt: KTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASR
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.5e-11 | 38.82 | Show/hide |
Query: WIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSI
W +AM E++++ N W LV P + + CKW++K K G + KARLVAK + Q+EGI + ET+S V +IR +L++
Subjt: WIKAMDFEMESMYSNSVWTLVDQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-27 | 42.86 | Show/hide |
Query: DQWIKAMDFEMESMYSNSVWTLV-DQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIWQMN
++W AM E+ + N W LV P+ V + C+WI+ +K + G + +KARLVAK Y Q+ G+DY ETFS V SIRI+L + + I Q++
Subjt: DQWIKAMDFEMESMYSNSVWTLV-DQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIWQMN
Query: VKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
V FL G L + +YM QP FI K + VCKL+K++YGLKQA R+
Subjt: VKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-27 | 42.86 | Show/hide |
Query: DQWIKAMDFEMESMYSNSVWTLV-DQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIWQMN
D+W +AM E+ + N W LV P V + C+WI+ +K + G + +KARLVAK Y Q+ G+DY ETFS V SIRI+L + + I Q++
Subjt: DQWIKAMDFEMESMYSNSVWTLV-DQPNDVKPIDCKWIYKRKRDQAGKVQTFKARLVAKCYTQKEGIDYEETFSLVAMIKSIRILLSIVTFYDYEIWQMN
Query: VKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
V FL G L + +YM QP F+ K + VC+L+K+IYGLKQA R+
Subjt: VKTTFLNGNLEESIYMVQPEWFIQKHQEQKVCKLQKSIYGLKQASRS
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