| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 6.4e-103 | 84.65 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQ SYIDK+L RYKMQNSKKG LP+R+GIHL KEQCPKTPQEVEDM NIPY+S +GS+MYAMLCTR DICYS+GIVSRYQ+NPG DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RT++YMLVYG+KDLILTGYTDSDFQ+DK+ARK TS SVFTLN GAVVWRS+K++CIADSTMEAEYVA CEAAKEAVWL+KFLTDLEVVPNMHLPITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAVAN +EPRS+K
Subjt: NSGAVANLREPRSYK
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| KAA0052272.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-103 | 86.05 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKMQNSKK LLPYRYGIHL KEQCPKTPQEV+DMSNIPYAS +GS+MYAMLCTR DICYS+GIVSRYQ+NPG DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYMLVYGSKDLILT YTDSDFQ+DK+ RK TS SVFTLN AVVW+ IK+SCIADSTMEAEYVA+CEAAKEAVWLKKFLTDLE+VPN+HLPITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAVAN +EPRS+K
Subjt: NSGAVANLREPRSYK
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 4.9e-103 | 86.98 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKM NSKKGLLPYRYGIHL KEQCPKTPQEVEDMSNIPYAS +GS+MY MLCTR +ICYS+GIVSR Q+ PG DHWTTVKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYMLVYGSKDLILTGYTD FQTDK+ARK TS VFT+N GAVVWRSIK+SCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLP TLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAV N REPRS+K
Subjt: NSGAVANLREPRSYK
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| TYK04838.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-101 | 85.58 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKMQNSKKGLLPY+YGIHL KEQC KTPQEVEDM NIPYAS +GS+MYAMLCTRLDICYS+GIVSRYQ+N DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYML+YGSKDLILTGYTDSDFQTDKNARK TS SVFTLN GAVVWRSIK+SC ADSTMEAEYVA CE AKE VWLKKFLTDL+V PNMH PITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSG VAN +EPRS+K
Subjt: NSGAVANLREPRSYK
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| TYK11050.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-103 | 86.98 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKMQNSKKGLLPYRYGIHL KEQCPKTPQEVEDMSNIPYAS IGS+MYAMLCTR+DICYS+GIV+RYQ+NPG DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYMLVYGSKDLILTGYTDSDFQTDK+ARK TS S+FTLN GAVVW+SIK+SCIA STMEA+YVA EAAKEAV KKFLTDLEVVPNMHLPITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAV N R PRS+K
Subjt: NSGAVANLREPRSYK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U945 Gag/pol protein | 8.1e-104 | 86.05 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKMQNSKK LLPYRYGIHL KEQCPKTPQEV+DMSNIPYAS +GS+MYAMLCTR DICYS+GIVSRYQ+NPG DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYMLVYGSKDLILT YTDSDFQ+DK+ RK TS SVFTLN AVVW+ IK+SCIADSTMEAEYVA+CEAAKEAVWLKKFLTDLE+VPN+HLPITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAVAN +EPRS+K
Subjt: NSGAVANLREPRSYK
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| A0A5D3BX45 Gag/pol protein | 2.4e-103 | 86.98 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKM NSKKGLLPYRYGIHL KEQCPKTPQEVEDMSNIPYAS +GS+MY MLCTR +ICYS+GIVSR Q+ PG DHWTTVKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYMLVYGSKDLILTGYTD FQTDK+ARK TS VFT+N GAVVWRSIK+SCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLP TLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAV N REPRS+K
Subjt: NSGAVANLREPRSYK
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| A0A5D3C0P2 Gag/pol protein | 5.8e-102 | 85.58 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKMQNSKKGLLPY+YGIHL KEQC KTPQEVEDM NIPYAS +GS+MYAMLCTRLDICYS+GIVSRYQ+N DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYML+YGSKDLILTGYTDSDFQTDKNARK TS SVFTLN GAVVWRSIK+SC ADSTMEAEYVA CE AKE VWLKKFLTDL+V PNMH PITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSG VAN +EPRS+K
Subjt: NSGAVANLREPRSYK
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| A0A5D3CI71 Gag/pol protein | 1.8e-103 | 86.98 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQTSYIDK+L RYKMQNSKKGLLPYRYGIHL KEQCPKTPQEVEDMSNIPYAS IGS+MYAMLCTR+DICYS+GIV+RYQ+NPG DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RTKDYMLVYGSKDLILTGYTDSDFQTDK+ARK TS S+FTLN GAVVW+SIK+SCIA STMEA+YVA EAAKEAV KKFLTDLEVVPNMHLPITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAV N R PRS+K
Subjt: NSGAVANLREPRSYK
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| E2GK51 Gag/pol protein (Fragment) | 3.1e-103 | 84.65 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
MSQ SYIDK+L RYKMQNSKKG LP+R+GIHL KEQCPKTPQEVEDM NIPY+S +GS+MYAMLCTR DICYS+GIVSRYQ+NPG DHWT VKNILKYLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
RT++YMLVYG+KDLILTGYTDSDFQ+DK+ARK TS SVFTLN GAVVWRS+K++CIADSTMEAEYVA CEAAKEAVWL+KFLTDLEVVPNMHLPITLYCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAVANLREPRSYK
NSGAVAN +EPRS+K
Subjt: NSGAVANLREPRSYK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.5e-27 | 32.88 | Show/hide |
Query: MSQTSYIDKILLRYKMQ--NSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKY
+SQ++Y+ KIL ++ M+ N+ LP + LL ++ N P S+IG +MY MLCTR D+ ++ I+SRY + + W +K +L+Y
Subjt: MSQTSYIDKILLRYKMQ--NSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKY
Query: LRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKNARKFTSRSVFTL-NRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHL
L+ T D L++ K+L + GY DSD+ + RK T+ +F + + + W + +++ +A S+ EAEY+A EA +EA+WLK LT + + +
Subjt: LRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKNARKFTSRSVFTL-NRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHL
Query: PITLYCDNSGAVANLREPRSYK
PI +Y DN G ++ P +K
Subjt: PITLYCDNSGAVANLREPRSYK
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| P0CV72 Secreted RxLR effector protein 161 | 6.1e-24 | 41.35 | Show/hide |
Query: MSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKNARKFTSRSVFTLNRGA
M N+PY S +G++MY M+ TR D+ ++G++S++ ++P HW +K +L+YL+ T+ Y L + L GY+D+D+ D +R+ TS +F LN G
Subjt: MSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKNARKFTSRSVFTLNRGA
Query: VVWRSIKKSCIADSTMEAEYVATCEAAKEAVWL
V WRS K+ +A S+ E EY+A EA +EAVWL
Subjt: VVWRSIKKSCIADSTMEAEYVATCEAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.7e-46 | 43.41 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
+SQ YI+++L R+ M+N+K P + L K+ CP T +E +M+ +PY+S +GS+MYAM+CTR DI +++G+VSR+ NPG +HW VK IL+YLR
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
T L +G D IL GYTD+D D + RK ++ +FT + GA+ W+S + C+A ST EAEY+A E KE +WLK+FL +L + ++ +YCD
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYCD
Query: NSGAV
+ A+
Subjt: NSGAV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.8e-18 | 29.27 | Show/hide |
Query: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
+SQ Y +L R M +K P L K P E Y ++GS+ Y + TR D+ Y++ +S+Y P DHW +K +L+YL
Subjt: MSQTSYIDKILLRYKMQNSKKGLLPYRYGIHLLKEQCPKTPQEVEDMSNIPYASVIGSMMYAMLCTRLDICYSIGIVSRYQTNPGCDHWTTVKNILKYLR
Query: RTKDY-MLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYC
T D+ + + L L Y+D+D+ D + T+ + L + W S K+ + S+ EAEY + + E W+ LT+L + + P +YC
Subjt: RTKDY-MLVYGSKDLILTGYTDSDFQTDKNARKFTSRSVFTLNRGAVVWRSIKKSCIADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPITLYC
Query: DNSGA
DN GA
Subjt: DNSGA
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