CuGenDBv2

Gene ID	Cmc04g0104671
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:22649945..22651633
RNA-Seq Expression	Cmc04g0104671
Synteny	Cmc04g0104671
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025366.1 pol protein [Cucumis melo var. makuwa]

2.7e-285

97.08

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Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
        IVFIDDILIYSKTEAEHEEHLR       VVSKAGVSVDPAKIE VTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED

Query:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-----KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
        SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQ      KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Subjt:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-----KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP

Query:  GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLC
        GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLC
Subjt:  GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLC

Query:  VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIV
        VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRP GLLQPLSVPEWKWENVSMDFITGLPRTLRGFIV
Subjt:  VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIV

Query:  IWVVVDRLTKSAH
        IWVVVDRLTKSAH
Subjt:  IWVVVDRLTKSAH

KAA0036553.1 pol protein [Cucumis melo var. makuwa]

6.2e-274

88.5

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Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP I+DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
        IVFIDDILIYSKTEAEHEEHLR+VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE RSFLGLAGYYRRFVENF  IATPLTQLTRKGAPFV SKACED
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED

Query:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT
        SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Subjt:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT

Query:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR
        QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKR
Subjt:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR

Query:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS
        GLAEAGQAVEFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEF S+CLVCQQVK PRQ+PAGLLQPLS
Subjt:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS

Query:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        +PEWKWENVSMDFITGLPRTL+GF VIWVVVDRLTKSAH
Subjt:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

5.3e-273

85.59

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Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        IVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF R
Subjt:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW
        IATPLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW

Query:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS
        RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL+
Subjt:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS

Query:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS
        +QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SS+GGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWR+MKREVAEFVS
Subjt:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS

Query:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        +CLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Subjt:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

KAA0051368.1 pol protein [Cucumis melo var. makuwa]

5.1e-276

89.05

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Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGA VFSK DLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR+FLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
        IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPFV SKACED
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED

Query:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT
        SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Subjt:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT

Query:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR
        QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKR
Subjt:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR

Query:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS
        GLAEAGQ  EFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS
Subjt:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS

Query:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        +PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Subjt:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

TYK01613.1 pol protein [Cucumis melo var. makuwa]

5.3e-273

85.77

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        IVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF R
Subjt:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW
        IATPLTQLTRKGAPFV SKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW

Query:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS
        RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL+
Subjt:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS

Query:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS
        +QPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEFVS
Subjt:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS

Query:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        KCLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Subjt:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SHP6 Pol protein

1.3e-285

97.08

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
        IVFIDDILIYSKTEAEHEEHLR       VVSKAGVSVDPAKIE VTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED

Query:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-----KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
        SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQ      KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Subjt:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-----KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP

Query:  GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLC
        GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLC
Subjt:  GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLC

Query:  VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIV
        VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRP GLLQPLSVPEWKWENVSMDFITGLPRTLRGFIV
Subjt:  VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIV

Query:  IWVVVDRLTKSAH
        IWVVVDRLTKSAH
Subjt:  IWVVVDRLTKSAH

A0A5A7T0Y9 Reverse transcriptase

3.0e-274

88.5

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP I+DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
        IVFIDDILIYSKTEAEHEEHLR+VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE RSFLGLAGYYRRFVENF  IATPLTQLTRKGAPFV SKACED
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED

Query:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT
        SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Subjt:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT

Query:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR
        QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKR
Subjt:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR

Query:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS
        GLAEAGQAVEFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEF S+CLVCQQVK PRQ+PAGLLQPLS
Subjt:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS

Query:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        +PEWKWENVSMDFITGLPRTL+GF VIWVVVDRLTKSAH
Subjt:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

A0A5A7U330 Reverse transcriptase

2.5e-273

85.59

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        IVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF R
Subjt:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW
        IATPLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW

Query:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS
        RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL+
Subjt:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS

Query:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS
        +QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SS+GGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWR+MKREVAEFVS
Subjt:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS

Query:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        +CLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Subjt:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

A0A5A7U7V9 Reverse transcriptase

2.5e-276

89.05

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGA VFSK DLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR+FLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED
        IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPFV SKACED
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACED

Query:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT
        SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Subjt:  SFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT

Query:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR
        QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKR
Subjt:  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKR

Query:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS
        GLAEAGQ  EFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS
Subjt:  GLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLS

Query:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        +PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Subjt:  VPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

A0A5D3BPI1 Reverse transcriptase

2.5e-273

85.77

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        IVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF R
Subjt:  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW
        IATPLTQLTRKGAPFV SKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW

Query:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS
        RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL+
Subjt:  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLS

Query:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS
        +QPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEFVS
Subjt:  IQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVS

Query:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
        KCLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Subjt:  KCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.5e-73

29.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  F    G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        + ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+    +
Subjt:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------
        +  PL  L +K   +  +     + +N+KQ LV+ PVL   D S   ++ +DAS   +  +L Q+                                   
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------

Query:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA
          K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALS+       ++    P+ +D E   I      
Subjt:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+SI    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA
         +++++ E+V  C  CQ  K+   +P G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA

P0CT35 Transposon Tf2-2 polyprotein

1.5e-73

29.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  F    G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        + ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+    +
Subjt:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------
        +  PL  L +K   +  +     + +N+KQ LV+ PVL   D S   ++ +DAS   +  +L Q+                                   
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------

Query:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA
          K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALS+       ++    P+ +D E   I      
Subjt:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+SI    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA
         +++++ E+V  C  CQ  K+   +P G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA

P0CT36 Transposon Tf2-3 polyprotein

1.5e-73

29.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  F    G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        + ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+    +
Subjt:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------
        +  PL  L +K   +  +     + +N+KQ LV+ PVL   D S   ++ +DAS   +  +L Q+                                   
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------

Query:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA
          K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALS+       ++    P+ +D E   I      
Subjt:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+SI    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA
         +++++ E+V  C  CQ  K+   +P G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA

P0CT37 Transposon Tf2-4 polyprotein

1.5e-73

29.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  F    G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        + ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+    +
Subjt:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------
        +  PL  L +K   +  +     + +N+KQ LV+ PVL   D S   ++ +DAS   +  +L Q+                                   
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------

Query:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA
          K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALS+       ++    P+ +D E   I      
Subjt:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+SI    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA
         +++++ E+V  C  CQ  K+   +P G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA

P0CT41 Transposon Tf2-12 polyprotein

1.5e-73

29.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  F    G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR
        + ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+    +
Subjt:  IVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFR

Query:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------
        +  PL  L +K   +  +     + +N+KQ LV+ PVL   D S   ++ +DAS   +  +L Q+                                   
Subjt:  IATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQG----------------------------------

Query:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA
          K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALS+       ++    P+ +D E   I      
Subjt:  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+SI    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA
         +++++ E+V  C  CQ  K+   +P G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  DMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSA

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

9.9e-20

40.5

Show/hide

Query:  VSFLG--HVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGS
        +++LG  H++S  GVS DPAK+E +  WP P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +    ++    +F+ LK  + T PVL +PD  
Subjt:  VSFLG--HVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLSCILMQQ
          FV  +   K   SC + ++
Subjt:  GSFVIYSDASKKGLSCILMQQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGAAGACCTTTTTGACCAGTTACAGGGAGCTACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGCTGATGTACCGAAGACGACCTTTCATTCCAGATACGGACACTATGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATAT
TCCAAGACGGAGGCCGAGCATGAGGAACACTTACGTATGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGACAGTCAC
CAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACTC
AGTTAACGAGGAAGGGAGCTCCTTTTGTTAGGAGCAAGGCATGTGAGGACAGCTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGT
TCAGGTAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGAGTTGTATATTGATGCAGCAAGGTAAGATATGGAGGCATTACTTGTATGGTGACAAGATACAGAT
CTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAAGATTACGATTGTGAGATACTGTATC
ATCCAGGCAAGACAAATGTGGTAGCTGATGCTCTTAGTAAAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTAGAGAGAGCTGAG
ATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCTCAGTTGTCGATACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGA
GAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTAATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCAGATAGTGCGGTTAAAA
CAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGCAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTGATATGAAGAGAGAG
GTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAAACACCAAGGCAGAGACCAGCGGGTTTATTACAACCCTTGAGCGTACCAGAATGGAAGTGGGAAAA
TGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTCATAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCGCACTAA

mRNA sequence

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Protein sequence

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MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY
SKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDG
SGSFVIYSDASKKGLSCILMQQGKIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAE
IAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKRE
VAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

Cmc04g0104671 (gene) of Melon (Charmono) v1.1 genome