| GenBank top hits | e value | %identity | Alignment |
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| KAA0036533.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 6.6e-76 | 87.27 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MYN+ED KDLT+ALSSVDVNLWQ+AINDEMDSLESNRTWHLVDLPP CKAIGCKWVLRKK KPDGS+DKYKARLVAKGFR +N++FFDTFS VTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI LNNLLIHQMDVKT FLNGDLEEEIYMEQPEGFIV QESKVCKL+KSLYGLKQA K+
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| KAA0046026.1 putative Polyprotein [Cucumis melo var. makuwa] | 9.9e-80 | 93.33 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
+YNVEDSKDLTEALSSVD NLWQEAINDEMDSLESNRTWHLVDLPP CKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFR R+NI+FFDTFSPVTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI ALNNLLIHQMDVKTAFLN DLEEEIYMEQ EGFIVHGQESKVCKL+KSLYGLKQA KQ
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| KAA0058878.1 putative polyprotein [Cucumis melo var. makuwa] | 6.0e-77 | 90.3 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MYNVEDSKDLTEALSS+DVNLWQEAINDEMDSLESNRTWHLVDLP CK IG KW+LRKK+K DGSVDKYKARLVAKGFR RKNINFFDTFSPVTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI+ALNNLLIHQMDVKT FLNGDLEEEIYMEQPE FIVHGQE KVCKL+KSLYGL+QA KQ
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| KAA0059671.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.6e-74 | 87.27 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MY+VED KDLTEALSSVD NLWQEA NDE+DSLESN+TWHL+DLP CKAIGCK VL+KKLKPD SVDKYKARLVAKGFR R+NI+FFDTFSPVTRIT I
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI ALNNLLIHQMDVKTAFLNGDLEEEIYM+QP+GFIVHGQESKVCKL+KSLYGLKQA KQ
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| TYK22685.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 3.5e-77 | 88.48 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MYN+ED KDLTEALSSVDVNLWQ+AINDEMDSLESNRTWHLVDLPP CKAIGCKWVLRKK KPDGS+DKYKARLVAKGFR R+N++FFDTFS VTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI LNNLLIHQMDVKT FLNGDLEEEIYMEQPEGFIV QESKVCKL+KSLYGLKQA K+
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T0X0 Retrotransposon protein, putative, Ty1-copia subclass | 3.2e-76 | 87.27 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MYN+ED KDLT+ALSSVDVNLWQ+AINDEMDSLESNRTWHLVDLPP CKAIGCKWVLRKK KPDGS+DKYKARLVAKGFR +N++FFDTFS VTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI LNNLLIHQMDVKT FLNGDLEEEIYMEQPEGFIV QESKVCKL+KSLYGLKQA K+
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| A0A5A7TV55 Putative Polyprotein | 4.8e-80 | 93.33 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
+YNVEDSKDLTEALSSVD NLWQEAINDEMDSLESNRTWHLVDLPP CKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFR R+NI+FFDTFSPVTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI ALNNLLIHQMDVKTAFLN DLEEEIYMEQ EGFIVHGQESKVCKL+KSLYGLKQA KQ
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| A0A5A7V1T0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-74 | 87.27 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MY+VED KDLTEALSSVD NLWQEA NDE+DSLESN+TWHL+DLP CKAIGCK VL+KKLKPD SVDKYKARLVAKGFR R+NI+FFDTFSPVTRIT I
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI ALNNLLIHQMDVKTAFLNGDLEEEIYM+QP+GFIVHGQESKVCKL+KSLYGLKQA KQ
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| A0A5D3DGJ1 Retrotransposon protein, putative, Ty1-copia sub-class | 1.7e-77 | 88.48 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MYN+ED KDLTEALSSVDVNLWQ+AINDEMDSLESNRTWHLVDLPP CKAIGCKWVLRKK KPDGS+DKYKARLVAKGFR R+N++FFDTFS VTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI LNNLLIHQMDVKT FLNGDLEEEIYMEQPEGFIV QESKVCKL+KSLYGLKQA K+
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| A0A5D3DJH9 Putative polyprotein | 2.9e-77 | 90.3 | Show/hide |
Query: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
MYNVEDSKDLTEALSS+DVNLWQEAINDEMDSLESNRTWHLVDLP CK IG KW+LRKK+K DGSVDKYKARLVAKGFR RKNINFFDTFSPVTRITSI
Subjt: MYNVEDSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSI
Query: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
RVLISI+ALNNLLIHQMDVKT FLNGDLEEEIYMEQPE FIVHGQE KVCKL+KSLYGL+QA KQ
Subjt: RVLISITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.4e-31 | 46.26 | Show/hide |
Query: DVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISITALNNLLIHQM
D + W+EAIN E+++ + N TW + P + +WV K G+ +YKARLVA+GF + I++ +TF+PV RI+S R ++S+ NL +HQM
Subjt: DVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISITALNNLLIHQM
Query: DVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALK
DVKTAFLNG L+EEIYM P+G + VCKLNK++YGLKQA +
Subjt: DVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-40 | 53.12 | Show/hide |
Query: DSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLIS
+ + L E LS + N +A+ +EM+SL+ N T+ LV+LP + + CKWV + K D + +YKARLV KGF +K I+F + FSPV ++TSIR ++S
Subjt: DSKDLTEALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLIS
Query: ITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
+ A +L + Q+DVKTAFL+GDLEEEIYMEQPEGF V G++ VCKLNKSLYGLKQA +Q
Subjt: ITALNNLLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQALKQ
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.5e-17 | 45.88 | Show/hide |
Query: WQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISI
W +A+ +E+D+L N+TW LV P +GCKWV + KL DG++D+ KARLVAKGF + I F +T+SPV R +IR ++++
Subjt: WQEAINDEMDSLESNRTWHLVDLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-32 | 43.71 | Show/hide |
Query: ALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPP-RCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISITALNN
A+ ++ W+ A+ E+++ N TW LV PP +GC+W+ KK DGS+++YKARLVAKG+ R +++ +TFSPV + TSIR+++ + +
Subjt: ALSSVDVNLWQEAINDEMDSLESNRTWHLVDLPP-RCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISITALNN
Query: LLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQA
I Q+DV AFL G L +++YM QP GFI + + VCKL K+LYGLKQA
Subjt: LLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.6e-32 | 42.38 | Show/hide |
Query: ALSSVDVNLWQEAINDEMDSLESNRTWHLV-DLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISITALNN
A+ ++ + W++A+ E+++ N TW LV PP +GC+W+ KK DGS+++YKARLVAKG+ R +++ +TFSPV + TSIR+++ + +
Subjt: ALSSVDVNLWQEAINDEMDSLESNRTWHLV-DLPPRCKAIGCKWVLRKKLKPDGSVDKYKARLVAKGFRHRKNINFFDTFSPVTRITSIRVLISITALNN
Query: LLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQA
I Q+DV AFL G L +E+YM QP GF+ + VC+L K++YGLKQA
Subjt: LLIHQMDVKTAFLNGDLEEEIYMEQPEGFIVHGQESKVCKLNKSLYGLKQA
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