| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.0e-70 | 88.82 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQWIKAMNLEMESMY NSVWTLVD P+DV+PIGCKWIYKRKRDQA KVQTFKARLVAKGYTQKEG++YEETFSP+AM+KSIRI LSIATFY+YE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKTAFLN NLEESIYMVQPEGFI + QEQKVCKLQKSIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 6.8e-67 | 83.55 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQW+KAM+LEMESMY NSVW LVD P V+PIGCKWIYKRKRD A KVQTFKARLVAKGYTQ+EG++YEETFSP+AM+KSIRI LSIATFYDYE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKTAFLN NLEESI+M QPEGFI +GQEQKVCKL +SIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-73 | 92.05 | Show/hide |
Query: NDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEI
NDVDSDQWIKAM+L+MESMYSNSVWTLVDQPN++RPIGCKWIYKRKRDQ KVQTF+ARLVAKGYTQKEGI+YEETFSPIAMIKSIRI LSIATFYDYEI
Subjt: NDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEI
Query: WQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
WQM+VKTAFLN NLEESIYMVQPEGFI+KGQEQKVCKLQKSIYGLKQASRS
Subjt: WQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-70 | 90.13 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQWIKAM+LEMESMYSNSVWTLVDQPNDV+PIGCKWIYKRKRDQA KVQTFKARLVAKGYTQKEGI+YEE FS AMIKSIRI LSIATFYDYE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKT FLN NLEESIYMVQPE FI+KGQEQK+CKLQKSIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 6.8e-67 | 83.55 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQW+KAM+LEMESMY NSVW LVD P V+PIGCKWIYKRKRD A KVQTFKARLVAKGYTQ+EG++YEETFSP+AM+KSIRI LSIATFYDYE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKTAFLN NLEESI+M QPEGFI +GQEQKVCKL +SIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 8.1e-74 | 92.05 | Show/hide |
Query: NDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEI
NDVDSDQWIKAM+L+MESMYSNSVWTLVDQPN++RPIGCKWIYKRKRDQ KVQTF+ARLVAKGYTQKEGI+YEETFSPIAMIKSIRI LSIATFYDYEI
Subjt: NDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEI
Query: WQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
WQM+VKTAFLN NLEESIYMVQPEGFI+KGQEQKVCKLQKSIYGLKQASRS
Subjt: WQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| A0A5A7TZD0 Gag/pol protein | 3.3e-67 | 83.55 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQW+KAM+LEMESMY NSVW LVD P V+PIGCKWIYKRKRD A KVQTFKARLVAKGYTQ+EG++YEETFSP+AM+KSIRI LSIATFYDYE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKTAFLN NLEESI+M QPEGFI +GQEQKVCKL +SIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| A0A5D3BX45 Gag/pol protein | 1.1e-70 | 90.13 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQWIKAM+LEMESMYSNSVWTLVDQPNDV+PIGCKWIYKRKRDQA KVQTFKARLVAKGYTQKEGI+YEE FS AMIKSIRI LSIATFYDYE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKT FLN NLEESIYMVQPE FI+KGQEQK+CKLQKSIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| A0A5D3CYF4 Gag/pol protein | 3.3e-67 | 83.55 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQW+KAM+LEMESMY NSVW LVD P V+PIGCKWIYKRKRD A KVQTFKARLVAKGYTQ+EG++YEETFSP+AM+KSIRI LSIATFYDYE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKTAFLN NLEESI+M QPEGFI +GQEQKVCKL +SIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| E2GK51 Gag/pol protein (Fragment) | 4.9e-71 | 88.82 | Show/hide |
Query: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
MNDVD DQWIKAMNLEMESMY NSVWTLVD P+DV+PIGCKWIYKRKRDQA KVQTFKARLVAKGYTQKEG++YEETFSP+AM+KSIRI LSIATFY+YE
Subjt: MNDVDSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYE
Query: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
IWQM+VKTAFLN NLEESIYMVQPEGFI + QEQKVCKLQKSIYGLKQASRS
Subjt: IWQMNVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.8e-29 | 43.54 | Show/hide |
Query: DSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQM
D W +A+N E+ + N+ WT+ +P + + +W++ K ++ +KARLVA+G+TQK I+YEETF+P+A I S R LS+ Y+ ++ QM
Subjt: DSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQM
Query: NVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASR
+VKTAFLN L+E IYM P+G VCKL K+IYGLKQA+R
Subjt: NVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-38 | 52.38 | Show/hide |
Query: DSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQM
+ +Q +KAM EMES+ N + LV+ P RP+ CKW++K K+D CK+ +KARLV KG+ QK+GI+++E FSP+ + SIR LS+A D E+ Q+
Subjt: DSDQWIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQM
Query: NVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASR
+VKTAFL+ +LEE IYM QPEGF G++ VCKL KS+YGLKQA R
Subjt: NVKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASR
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.2e-13 | 40.7 | Show/hide |
Query: WIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIA
W +AM E++++ N W LV P + +GCKW++K K + KARLVAKG+ Q+EGI + ET+SP+ +IR L++A
Subjt: WIKAMNLEMESMYSNSVWTLVDQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.9e-30 | 44.22 | Show/hide |
Query: DQWIKAMNLEMESMYSNSVWTLV-DQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQMN
++W AM E+ + N W LV P+ V +GC+WI+ +K + + +KARLVAKGY Q+ G++Y ETFSP+ SIRI L +A + I Q++
Subjt: DQWIKAMNLEMESMYSNSVWTLV-DQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQMN
Query: VKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
V AFL L + +YM QP GFI K + VCKL+K++YGLKQA R+
Subjt: VKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.9e-30 | 44.22 | Show/hide |
Query: DQWIKAMNLEMESMYSNSVWTLV-DQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQMN
D+W +AM E+ + N W LV P V +GC+WI+ +K + + +KARLVAKGY Q+ G++Y ETFSP+ SIRI L +A + I Q++
Subjt: DQWIKAMNLEMESMYSNSVWTLV-DQPNDVRPIGCKWIYKRKRDQACKVQTFKARLVAKGYTQKEGINYEETFSPIAMIKSIRIPLSIATFYDYEIWQMN
Query: VKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
V AFL L + +YM QP GF+ K + VC+L+K+IYGLKQA R+
Subjt: VKTAFLNCNLEESIYMVQPEGFIKKGQEQKVCKLQKSIYGLKQASRS
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