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Cmc04g0105391 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0105391
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein ROOT HAIR DEFECTIVE 3
Genome locationCMiso1.1chr04:23483438..23485489
RNA-Seq ExpressionCmc04g0105391
SyntenyCmc04g0105391
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005525 - GTP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR008803 - RHD3/Sey1
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR030386 - GB1/RHD3-type guanine nucleotide-binding (G) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3796049.1 ROOT HAIR DEFECTIVE 3 protein [Nymphaea thermarum]2.2e-3284.15Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEVMMRLFSPHKTTLMFVIRD
        MGPQSSGKSTLLN+LF TNFRE+DAFKGR+Q TKGIWLA+C  IEP TL+MDLEGTDGRERGEVMMRLF+P KTTL+FVIRD
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEVMMRLFSPHKTTLMFVIRD

KAG5000672.1 hypothetical protein JHK87_021744 [Glycine soja]1.2e-3059.84Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

KAG5025927.1 hypothetical protein JHK86_021841 [Glycine max]1.2e-3059.84Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

KHN11286.1 Protein ROOT HAIR DEFECTIVE 3 like 1 [Glycine soja]1.2e-3059.84Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

ONM40606.1 Protein ROOT HAIR DEFECTIVE 3 [Zea mays]1.1e-3178.89Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKG--------RSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEVMMRLFSPHKTTLMFVIRD
        MGPQSSGKSTLLN+LFGTNFRE+DAF+G        RSQ TKGIWLA+  +IEPCTL+MDLEGTDGRERGEVMMRLFSP KTTL+FVIRD
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKG--------RSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEVMMRLFSPHKTTLMFVIRD

TrEMBL top hitse value%identityAlignment
A0A1D6NK29 Protein ROOT HAIR DEFECTIVE 35.4e-3278.89Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKG--------RSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEVMMRLFSPHKTTLMFVIRD
        MGPQSSGKSTLLN+LFGTNFRE+DAF+G        RSQ TKGIWLA+  +IEPCTL+MDLEGTDGRERGEVMMRLFSP KTTL+FVIRD
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKG--------RSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEVMMRLFSPHKTTLMFVIRD

A0A1U8AA95 Protein ROOT HAIR DEFECTIVE 3 homolog7.8e-3159.84Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLNNLFGTNFRE+DAF+GRSQ TKGIWLARCADIEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

A0A445JH49 Protein ROOT HAIR DEFECTIVE 3 homolog6.0e-3159.84Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

A0A445JH51 Protein ROOT HAIR DEFECTIVE 3 homolog6.0e-3159.84Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

I1KUU5 Protein ROOT HAIR DEFECTIVE 3 homolog6.0e-3159.84Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLNNLFGTNFRE+DAFKGRSQ TKGIW+ARCADIEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

SwissProt top hitse value%identityAlignment
P93042 Protein ROOT HAIR DEFECTIVE 38.8e-3257.48Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN+LFGTNFRE+DAF+GRSQ TKGIW+ARCA IEPCT++MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTLMFVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

Q0JLS6 Protein ROOT HAIR DEFECTIVE 32.4e-2955.12Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN+LF TNFRE+DAFKGRSQ TKGIW+A+  +IEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

Q2QMH2 Protein ROOT HAIR DEFECTIVE 3 homolog 19.8e-3155.12Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN LFGTNFRE+DAF+GRSQ TKGIW+ARC  +EPCT++MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

Q9FKE9 Protein ROOT HAIR DEFECTIVE 3 homolog 22.3e-2752.76Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN+LF T+FRE+DAF GRSQ TKGIW+ARC  IEP T+ MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VM+RLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

Q9SSN0 Protein ROOT HAIR DEFECTIVE 3 homolog 12.0e-3157.48Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN+LFGTNF E+DAFKGRSQ TKGIWLARCA IEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTT++FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

Arabidopsis top hitse value%identityAlignment
AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3)1.4e-3257.48Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN+LFGTNF E+DAFKGRSQ TKGIWLARCA IEPCTL+MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTT++FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

AT3G13870.1 Root hair defective 3 GTP-binding protein (RHD3)6.3e-3357.48Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN+LFGTNFRE+DAF+GRSQ TKGIW+ARCA IEPCT++MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VMMRLFSP KTTLMFVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD

AT3G13870.2 Root hair defective 3 GTP-binding protein (RHD3)2.8e-1747.52Show/hide
Query:  KGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE---------------------------------------------VMMRLFSPHKTTLMFVIR
        +G SQ TKGIW+ARCA IEPCT++MDLEGTDGRERGE                                             VMMRLFSP KTTLMFVIR
Subjt:  KGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE---------------------------------------------VMMRLFSPHKTTLMFVIR

Query:  D
        D
Subjt:  D

AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3)1.6e-2852.76Show/hide
Query:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------
        MGPQSSGKSTLLN+LF T+FRE+DAF GRSQ TKGIW+ARC  IEP T+ MDLEGTDGRERGE                                     
Subjt:  MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGE-------------------------------------

Query:  --------VMMRLFSPHKTTLMFVIRD
                VM+RLFSP KTTL+FVIRD
Subjt:  --------VMMRLFSPHKTTLMFVIRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTCAAAGTAGTGGGAAGAGTACACTACTAAATAATCTGTTTGGAACCAACTTCAGAGAGATAGATGCTTTCAAAGGGAGGTCGCAAAAAACTAAAGGT
ATATGGTTGGCTAGATGCGCCGACATCGAGCCTTGTACACTTATGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTCATGATGAGATTGTTCAGT
CCACATAAAACAACACTAATGTTTGTCATACGTGATTAA
mRNA sequenceShow/hide mRNA sequence
TAGCTTATAGATAGAGATGGAGGATTCAATGTCGATGGAATTGAGGGCTTTATCAAAGACGTGAAATTGGGGGAATGTGGACTTTCACATGCAGTAATGGGCCCT
CAAAGTAGTGGGAAGAGTACACTACTAAATAATCTGTTTGGAACCAACTTCAGAGAGATAGATGCTTTCAAAGGGAGGTCGCAAAAAACTAAAGGTATATGGTTG
GCTAGATGCGCCGACATCGAGCCTTGTACACTTATGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTCATGATGAGATTGTTCAGTCCACATAAA
ACAACACTAATGTTTGTCATACGTGATTAAACAAGGATACTATTGGAAAATTTAGAGCCTGTTCTTAGAGGATGTACATAAGGTTGCAAATTTGAGACAGAGATT
CTTCCATTCTATTGCCCTAGGAGGACTGGTTGAGGTTGGAAGAAGAAGTACAGTCCGGTCCAGGTTAAGGTTTTGGAAAGAAGTTAAGTTTGATCATCAATACTT
GAATGAAGGGGAAGGGTTTACCACAATCTACAACGCTCTATCAAAACAGTCTAGTCTAGGGTCGGTTTTATTGGCCGATTTGTGTAAGCTTTTAAATATTTTTTT
GGTCGAGTTAAGTTAGTAGTTGATTTTAGTTTGTGATGGAACTGGTTGTTGTATATACTTCATTTTTGAGTTTTTTCGCTTGATGTTTTGAATTAAGTTTTTGTA
GGGACGGACAATTATGTAGTTTTTAG
Protein sequenceShow/hide protein sequence
MGPQSSGKSTLLNNLFGTNFREIDAFKGRSQKTKGIWLARCADIEPCTLMMDLEGTDGRERGEVMMRLFSPHKTTLMFVIRD