| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036643.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.0e-70 | 82.53 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD P I+SE PV E V+T NL CELE RRSKRQRTEKSF P+FL+TFIVERRDEIDCNFTNLFLI+ED KTYQEALNSV+S MWK+AIKSELDSL M
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIR
N TW+LVDLPMG+KPI+CKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYS VTKITTIR
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIR
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| KAA0038001.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.2e-72 | 86.79 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD EN SI+SET V E VNTSNLRCELELRRSKRQRTEKSF P+FL+TFIVERRDEID NFTNL+LIDEDPKTYQE LNSVE SMWK+AIKSELDSLVM
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSV
N TWDLVDLPMG+KPI+C+WIFKRKTKPNGS+ERYK RLVVVGYTQKQGIDYFDTYS V
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSV
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| KAA0042080.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-75 | 86.9 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD ENPSI+SE PV ETV+TSNLRCELELRRSKRQRTEKSF +FL+TFIVERRDEID NFTNL+LIDEDPKTYQEALNSV+ SMWK+AI SELDSLVM
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVL
N TWDLVDLPM +KPI+CKWIFKRKTKPNGSIERYK RLVVVGYTQKQGIDYFDTYS VTKITTIR L
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVL
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| TYJ97996.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.3e-69 | 91.03 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD ENPSI+SETPV ETVNTSNLRCELEL RSKRQRTEKSF P+FL+TFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVESSMWK+AIKSELDSLVM
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYT
N TWDLVDLPMG+KPI+CKWIFKRKTKPNGSIERYK RLVVVGYT
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYT
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 5.8e-90 | 84.16 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD P I+SE PV ETV+T NL CELE RRSKRQRTEKSF P+FL+TFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSV+S MWK+AIKSELDSL M
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMT
N TW+LVDLPMG+KPI+CKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYS VTKITTIR LIAL AIH+LLIHQ+DVKT FLNG+LEEEIYMT
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMT
Query: QP
QP
Subjt: QP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T166 Ty1-copia retrotransposon protein | 5.0e-71 | 82.53 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD P I+SE PV E V+T NL CELE RRSKRQRTEKSF P+FL+TFIVERRDEIDCNFTNLFLI+ED KTYQEALNSV+S MWK+AIKSELDSL M
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIR
N TW+LVDLPMG+KPI+CKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYS VTKITTIR
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIR
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| A0A5A7T8N6 Ty1-copia retrotransposon protein | 1.5e-72 | 86.79 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD EN SI+SET V E VNTSNLRCELELRRSKRQRTEKSF P+FL+TFIVERRDEID NFTNL+LIDEDPKTYQE LNSVE SMWK+AIKSELDSLVM
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSV
N TWDLVDLPMG+KPI+C+WIFKRKTKPNGS+ERYK RLVVVGYTQKQGIDYFDTYS V
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSV
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| A0A5A7TFH9 Ty1-copia retrotransposon protein | 5.1e-76 | 86.9 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD ENPSI+SE PV ETV+TSNLRCELELRRSKRQRTEKSF +FL+TFIVERRDEID NFTNL+LIDEDPKTYQEALNSV+ SMWK+AI SELDSLVM
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVL
N TWDLVDLPM +KPI+CKWIFKRKTKPNGSIERYK RLVVVGYTQKQGIDYFDTYS VTKITTIR L
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVL
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| A0A5D3BFX4 Ty1-copia retrotransposon protein | 2.1e-69 | 91.03 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD ENPSI+SETPV ETVNTSNLRCELEL RSKRQRTEKSF P+FL+TFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVESSMWK+AIKSELDSLVM
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYT
N TWDLVDLPMG+KPI+CKWIFKRKTKPNGSIERYK RLVVVGYT
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYT
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 2.8e-90 | 84.16 | Show/hide |
Query: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
MHD P I+SE PV ETV+T NL CELE RRSKRQRTEKSF P+FL+TFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSV+S MWK+AIKSELDSL M
Subjt: MHDLENPSIISETPVFETVNTSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVM
Query: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMT
N TW+LVDLPMG+KPI+CKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYS VTKITTIR LIAL AIH+LLIHQ+DVKT FLNG+LEEEIYMT
Subjt: NQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMT
Query: QP
QP
Subjt: QP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-23 | 36.07 | Show/hide |
Query: TSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDED-PKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPIKCK
T N E+ RRS+R +T+ N E + ++ N I D P ++ E + S W++AI +EL++ +N TW + P + +
Subjt: TSNLRCELELRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDED-PKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPIKCK
Query: WIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
W+F K G+ RYK RLV G+TQK IDY +T++ V +I++ R +++LV ++L +HQ+DVKT FLNG L+EEIYM P
Subjt: WIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-30 | 42.77 | Show/hide |
Query: LRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPIKCKWIFKRKTKPN
LRRS+R R E P+ T ++ L D +P++ +E L+ E + A++ E++SL N T+ LV+LP G +P+KCKW+FK K +
Subjt: LRRSKRQRTEKSFDPNFLTTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPIKCKWIFKRKTKPN
Query: GSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
+ RYK RLVV G+ QK+GID+ + +S V K+T+IR +++L A L + Q+DVKT FL+GDLEEEIYM QP
Subjt: GSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRVLIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.1e-14 | 37.25 | Show/hide |
Query: IDEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRV
I ++PK+ + +++ W A++ ELD+L N+TW LV P+ + CKW+FK K +G+++R K RLV G+ Q++GI + +TYS V + TIR
Subjt: IDEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPIKCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRV
Query: LI
++
Subjt: LI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-23 | 40 | Show/hide |
Query: DEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPI-KCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRV
+ +P+T A+ +++ W++A+ SE+++ + N TWDLV P I C+WIF +K +GS+ RYK RLV GY Q+ G+DY +T+S V K T+IR+
Subjt: DEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPI-KCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRV
Query: LIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
++ + S I Q+DV FL G L +++YM+QP
Subjt: LIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.4e-24 | 41.48 | Show/hide |
Query: DEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPI-KCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRV
+ +P+T A+ +++ W+ A+ SE+++ + N TWDLV P S I C+WIF +K +GS+ RYK RLV GY Q+ G+DY +T+S V K T+IR+
Subjt: DEDPKTYQEALNSVESSMWKDAIKSELDSLVMNQTWDLVDLPMGSKPI-KCKWIFKRKTKPNGSIERYKIRLVVVGYTQKQGIDYFDTYSSVTKITTIRV
Query: LIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
++ + S I Q+DV FL G L +E+YM+QP
Subjt: LIALVAIHSLLIHQIDVKTVFLNGDLEEEIYMTQP
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