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Cmc04g0105551 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0105551
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibosomal protein
Genome locationCMiso1.1chr04:23612595..23615103
RNA-Seq ExpressionCmc04g0105551
SyntenyCmc04g0105551
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048381.1 Ribosomal protein S21 family protein isoform 1 [Cucumis melo var. makuwa]1.5e-44100Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
        MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
Subjt:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV

Query:  R
        R
Subjt:  R

KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3884.26Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQY-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI
        MNSL+RN+SCSIRSS+HTNCLQ+     QQWRGIRVKVL G LERALT LQRKM+SSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK I
Subjt:  MNSLARNISCSIRSSIHTNCLQY-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI

Query:  LIKKVRGV
        LIKKVRG+
Subjt:  LIKKVRGV

XP_004149720.1 uncharacterized protein LOC101216913 [Cucumis sativus]2.0e-4192.23Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
        MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV

Query:  RGV
        RG+
Subjt:  RGV

XP_008461813.1 PREDICTED: uncharacterized protein LOC103500324 [Cucumis melo]5.4e-47100Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
        MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
Subjt:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV

Query:  RGVNI
        RGVNI
Subjt:  RGVNI

XP_022982723.1 uncharacterized protein LOC111481507 [Cucurbita maxima]7.8e-3885.19Show/hide
Query:  MNSLARNISCSIRSSIHTNCL-----QYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI
        MNSL+RN+SCSIRSS+HTNCL     Q QQWRGIRVKVL G LERALT LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK I
Subjt:  MNSLARNISCSIRSSIHTNCL-----QYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI

Query:  LIKKVRGV
        LIKKVRG+
Subjt:  LIKKVRGV

TrEMBL top hitse value%identityAlignment
A0A0A0LCD1 Uncharacterized protein9.6e-4292.23Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
        MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV

Query:  RGV
        RG+
Subjt:  RGV

A0A1S3CG17 uncharacterized protein LOC1035003242.6e-47100Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
        MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
Subjt:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV

Query:  RGVNI
        RGVNI
Subjt:  RGVNI

A0A5A7U491 Ribosomal protein S21 family protein isoform 17.1e-45100Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
        MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV
Subjt:  MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV

Query:  R
        R
Subjt:  R

A0A6J1F3V2 uncharacterized protein LOC1114419293.8e-3884.26Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQY-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI
        MNSL+RN+SCSIRSS+HTNCLQ+     QQWRGIRVKVL G LERALT LQRKM+SSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK I
Subjt:  MNSLARNISCSIRSSIHTNCLQY-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI

Query:  LIKKVRGV
        LIKKVRG+
Subjt:  LIKKVRGV

A0A6J1J5L6 uncharacterized protein LOC1114815073.8e-3885.19Show/hide
Query:  MNSLARNISCSIRSSIHTNCL-----QYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI
        MNSL+RN+SCSIRSS+HTNCL     Q QQWRGIRVKVL G LERALT LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK I
Subjt:  MNSLARNISCSIRSSIHTNCL-----QYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDI

Query:  LIKKVRGV
        LIKKVRG+
Subjt:  LIKKVRGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein8.1e-2561.54Show/hide
Query:  MNSLARNISCSI-RSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKK
        MN++A+ ++  + R S++    Q QQ RGIRVKV    L++ALT+LQ+KMQSSG+ERLIK  Q HHIKNSEK+VLARK LER+I+S D ARKL+ ILIKK
Subjt:  MNSLARNISCSI-RSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKK

Query:  VRGV
        VRG+
Subjt:  VRGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCACACCAATTGTCTACAGTACCAGCAATGGAGGGGGATCCGGGTGAAGGTATTGAAA
GGGGGTCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGACTGATTAAGCGTGAACAAATTCATCATATCAAGAATTCCGAG
AAACGGGTTTTGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGACATCCTTATAAAGAAAGTCAGGGGTGTAAACATC
TGA
mRNA sequenceShow/hide mRNA sequence
TTGAGCTATTTTTACAAATAAACTCTATTTCATCTACTTCCCCTTTTTTGTTTCACGCCGTTAAACCCTATCTCTCCTCCCAACCTTTTCTCTTTTTCCTTCCTT
CCAAGTTTCGACCGTCTTTCACCGCCGCCGCCTCATGTATTTGGCATAACCACCACCTGTCCTCCATCAACGTAGCCCACTACATCTCCTGTGAGAACGACAAAC
AGAGGGAAATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCACACCAATTGTCTACAGTACCAGCAATGGAGGGGGATCCGGGTGAAGG
TATTGAAAGGGGGTCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGACTGATTAAGCGTGAACAAATTCATCATATCAAGA
ATTCCGAGAAACGGGTTTTGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGACATCCTTATAAAGAAAGTCAGGGGTG
TAAACATCTGACTTTTGCAATATAGTTGGCATTTTGCTCCCTTTTCTTTGGATCCCTTCTTTAACTCTGGATTGGCTGCCTCTTAGAAGTGCAATTGAAGCTCCT
TTATTCAGCAGGATAGCTCCAGTGAGTTTTTTTTTCATCTATATTGCTTTCTATCTATTCTGTATTCTCTTATACAGTGAGCAATTTTTCATGCCACTATGGATG
CTTCCTCAACCCACTCTGACTTACTCCTTGATCACTTTTTTACCACCTGCACTTTTGTTGGATTTCTGAACTTCGTGTTTTGAAATACTATGAATGATGTAATGG
TCCATATAGCTCATGAGCATAATAAAAAGGTTTAAAGAATTGCTTTATTTAATTTGAGGTAGTTTGTTTGTAAGAAGAAAAGAGAATGATG
Protein sequenceShow/hide protein sequence
MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI