; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0105751 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0105751
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr04:23750884..23753449
RNA-Seq ExpressionCmc04g0105751
SyntenyCmc04g0105751
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK03241.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

TYK06895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

TYK08113.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

TYK18362.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

TYK29027.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0075.79Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMFVELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

TrEMBL top hitse value%identityAlignment
A0A5A7SJX6 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

A0A5A7V3X9 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

A0A5D3CTU3 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

A0A5D3D497 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0075.67Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMF+ELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

A0A5D3DYS0 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0075.79Show/hide
Query:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM
        MCGSKSMFVELDESVGGDIVFGDATKIPVKGK KILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGY ILMKDYSLLIRDNHDKIIAKVQMTKNRM
Subjt:  MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRM

Query:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG
        FLLNIQ DVA+ LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDL GPIK SSFG
Subjt:  FLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFG

Query:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS
        KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD+GGEFTSNEFKTFC ENGIRR MTVPF PQQNGV ERKNRTILNMARS
Subjt:  KNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARS

Query:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------
        MLKCKKMPKEFWAQAVECAV                                                                                
Subjt:  MLKCKKMPKEFWAQAVECAV--------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ELLNFEE
                                                                                                     E LNFEE
Subjt:  ---------------------------------------------------------------------------------------------ELLNFEE

Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF
        ASQNDKWKIAMDEEIKAIKKNDTWELST PNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF+ VARLETIRLLI LAAQNNWKIF
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIF

Query:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA
        QMDVKS FLNGYLEEEVYLEQPPGYS+K QE+KVLKLKKALYGLKQAPRMWNSRINKYFLDNG+LRCPYEHSLYIKVNGHGDILVVCLY+DDLIFTGNCA
Subjt:  QMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCA

Query:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD
        SMFEDLK AMTQEF+MT+IGLMSYYLGIEVKQS+EGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD VDP YFKSLVGSLRYLTCTRPD
Subjt:  SMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPD

Query:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        ILFSVGL+SRFMESPTTTHLKVAKRILRYL+GTLDY LFYSSSKEFKLEGYCDSD
Subjt:  ILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.5e-7925.27Show/hide
Query:  LINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDG
        ++ L+N     + +V +      N++S+ +L E G +I      + I  N   ++    M  N + ++N Q   A  + +  K+   +WH RFGH++   
Subjt:  LINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQIDVAKYLKSCLKDPNWIWHLRFGHLNFDG

Query:  LRLLARKNMVKGLPYVKHPD---QLCEGCLHGKQSRKSFPQ-ESSSRARRPLELVHTDLYGPIKSSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMF
        L  + RKNM      + + +   ++CE CL+GKQ+R  F Q +  +  +RPL +VH+D+ GPI   +    NYF++F+D F+     Y +K KS+VF MF
Subjt:  LRLLARKNMVKGLPYVKHPD---QLCEGCLHGKQSRKSFPQ-ESSSRARRPLELVHTDLYGPIKSSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMF

Query:  KRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPKEFWAQAV---------------
        + F A  E      +  L  D G E+ SNE + FC + GI   +TVP  PQ NGV ER  RTI   AR+M+   K+ K FW +AV               
Subjt:  KRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPKEFWAQAV---------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------EC------------------------------------------
                                                                EC                                          
Subjt:  --------------------------------------------------------EC------------------------------------------

Query:  --------------------AVELLN--------------------------------------FEEASQND---KWKIAMDEEIKAIKKNDTWELSTFP
                             +E++N                                      F+E    D    W+ A++ E+ A K N+TW ++  P
Subjt:  --------------------AVELLN--------------------------------------FEEASQND---KWKIAMDEEIKAIKKNDTWELSTFP

Query:  NGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQ
          K  V  +WVF +K NE G   RYKARLVA+G++Q+  IDY+E F+ VAR+ + R +++L  Q N K+ QMDVK+ FLNG L+EE+Y+  P G S    
Subjt:  NGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQ

Query:  ENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGH-GDILVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIE
         + V KL KA+YGLKQA R W     +   +   +    +  +YI   G+  + + V LY+DD++      +   + K  + ++F+MT++  + +++GI 
Subjt:  ENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGH-GDILVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIE

Query:  VKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLS-KHEEGDYVDPLYFKSLVGSLRY-LTCTRPDILFSVGLMSRFMESPTTTHLKVAKRIL
        ++  ++ I++SQ  Y ++IL KFNM N   V+TP+ +       + + D   P   +SL+G L Y + CTRPD+  +V ++SR+     +   +  KR+L
Subjt:  VKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLS-KHEEGDYVDPLYFKSLVGSLRY-LTCTRPDILFSVGLMSRFMESPTTTHLKVAKRIL

Query:  RYLKGTLDYELFYSSSKEF--KLEGYCDSD
        RYLKGT+D +L +  +  F  K+ GY DSD
Subjt:  RYLKGTLDYELFYSSSKEF--KLEGYCDSD

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.4e-11130.46Show/hide
Query:  GDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQIDVAKYLKSC
        G +  G+ +   + G   I I    G    + +V +VP+++ N++S   L   GY     +    +      +IAK  + +  ++  N +I   +   + 
Subjt:  GDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQIDVAKYLKSC

Query:  LKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPD-QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFGKNNYFLLFIDDFSRK
         +    +WH R GH++  GL++LA+K+++    Y K    + C+ CL GKQ R SF Q SS R    L+LV++D+ GP++  S G N YF+ FIDD SRK
Subjt:  LKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPD-QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFGKNNYFLLFIDDFSRK

Query:  TWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPKEFWAQA
         WVY +K K +VF +F++F ALVE+E+G  +K LRSD GGE+TS EF+ +C+ +GIR   TVP  PQ NGV ER NRTI+   RSML+  K+PK FW +A
Subjt:  TWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPKEFWAQA

Query:  VECAVELLN---------------------------------FEEASQNDKWKI----------------------------------------------
        V+ A  L+N                                 F    +  + K+                                              
Subjt:  VECAVELLN---------------------------------FEEASQNDKWKI----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------AMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQ
                       AM EE+++++KN T++L   P GK+ +  KWVFK+K++   ++ RYKARLV KG+ Q+KGID+DE+FS V ++ +IR +++LAA 
Subjt:  ---------------AMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQ

Query:  NNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLI
         + ++ Q+DVK+ FL+G LEEE+Y+EQP G+ +  +++ V KL K+LYGLKQAPR W  + + +     +L+   +  +Y K     + +++ LY+DD++
Subjt:  NNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLI

Query:  FTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEV--KQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKH------EEGDYVDPLYFKS
          G    +   LK  +++ F M ++G     LG+++  +++   +++SQE+Y   +LE+FNM N+KPV+TP+    KLSK       EE   +  + + S
Subjt:  FTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEV--KQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKH------EEGDYVDPLYFKS

Query:  LVGSLRY-LTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
         VGSL Y + CTRPDI  +VG++SRF+E+P   H +  K ILRYL+GT    L +  S    L+GY D+D
Subjt:  LVGSLRY-LTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

P25600 Putative transposon Ty5-1 protein YCL074W1.9e-3433.33Show/hide
Query:  MDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCAS
        MDV + FLN  ++E +Y++QPPG+  +   + V +L   +YGLKQAP +WN  IN      G  R   EH LY +    G I  + +Y+DDL+       
Subjt:  MDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCAS

Query:  MFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEG-IFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCT-RP
        +++ +K  +T+ + M ++G +  +LG+ + QS  G I +S + Y  +   +  +   K   TP+     L +       D   ++S+VG L +   T RP
Subjt:  MFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEG-IFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCT-RP

Query:  DILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDS
        DI + V L+SRF+  P   HL+ A+R+LRYL  T    L Y S  +  L  YCD+
Subjt:  DILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDS

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.4e-7640.11Show/hide
Query:  KKMPKEFWAQAVECAVELLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF
        K  PK   A ++    E     +A ++++W+ AM  EI A   N TW+L    P+    VG +W+F  K N  G + RYKARLVAKGY+QR G+DY E F
Subjt:  KKMPKEFWAQAVECAVELLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVF

Query:  SLVARLETIRLLITLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIK
        S V +  +IR+++ +A   +W I Q+DV + FL G L ++VY+ QPPG+  KD+ N V KL+KALYGLKQAPR W   +  Y L  G +    + SL++ 
Subjt:  SLVARLETIRLLITLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIK

Query:  VNGHGDILVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEG
          G   I+ + +Y+DD++ TGN  ++  +  + ++Q F + +   + Y+LGIE K+   G+ +SQ RY  ++L + NM+ +KPV TP+    KLS +   
Subjt:  VNGHGDILVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEG

Query:  DYVDPLYFKSLVGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
           DP  ++ +VGSL+YL  TRPDI ++V  +S+FM  PT  HL+  KRILRYL GT ++ +F        L  Y D+D
Subjt:  DYVDPLYFKSLVGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.4e-2728.43Show/hide
Query:  GGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLE-KGYTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQID--VAKY
        G D++  D + IP+       ++ K+ +   + N+ YVPN+  N++S+ +L    G ++     S  ++D +  +      TK+ ++   I     V+ +
Subjt:  GGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLE-KGYTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQID--VAKY

Query:  LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLY-GPIKSSSFGKNNYFLLFIDD
             K  +  WH R GH     L  +   N    +    H    C  CL  K ++  F Q S+  + RPLE +++D++  PI S       Y+++F+D 
Subjt:  LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLY-GPIKSSSFGKNNYFLLFIDD

Query:  FSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPKEF
        F+R TW+Y +K+KS+V   F  FK L+E      I    SD GGEF +     + +++GI    + P  P+ NG+ ERK+R I+    ++L    +PK +
Subjt:  FSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPKEF

Query:  WAQAVECAVELLN
        W  A   AV L+N
Subjt:  WAQAVECAVELLN

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE28.0e-7824.54Show/hide
Query:  GGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKG-YTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQID--VAKY
        G D++  D + IP+       +   +   + ++ V YVPN+  N++S+ +L      ++     S  ++D +  +      TK+ ++   I     V+ +
Subjt:  GGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKG-YTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQID--VAKY

Query:  LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQL--CEGCLHGKQSRKSFPQESSSRARRPLELVHTDLY-GPIKSSSFGKNNYFLLFI
           C K  +  WH R GH     L +L        LP +    +L  C  C   K  +  F   S+  + +PLE +++D++  PI   S     Y+++F+
Subjt:  LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQL--CEGCLHGKQSRKSFPQESSSRARRPLELVHTDLY-GPIKSSSFGKNNYFLLFI

Query:  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPK
        D F+R TW+Y +K+KS+V   F  FK+LVE      I  L SD GGEF     + + +++GI    + P  P+ NG+ ERK+R I+ M  ++L    +PK
Subjt:  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPK

Query:  EFWAQAVECAVELLN---------------------------------------------------------------------------------FEE-
         +W  A   AV L+N                                                                                 F+E 
Subjt:  EFWAQAVECAVELLN---------------------------------------------------------------------------------FEE-

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------ASQNDKWKIAMDEEIKAIKKNDTWEL-STFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVAR
                          A ++D+W+ AM  EI A   N TW+L    P     VG +W+F  K N  G + RYKARLVAKGY+QR G+DY E FS V +
Subjt:  ------------------ASQNDKWKIAMDEEIKAIKKNDTWEL-STFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVAR

Query:  LETIRLLITLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHG
          +IR+++ +A   +W I Q+DV + FL G L +EVY+ QPPG+  KD+ + V +L+KA+YGLKQAPR W   +  Y L  G +    + SL++   G  
Subjt:  LETIRLLITLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHG

Query:  DILVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDP
         I+ + +Y+DD++ TGN   + +   +A++Q F +     + Y+LGIE K+  +G+ +SQ RYT ++L + NM+ +KPVATP+ T  KL+ H      DP
Subjt:  DILVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDP

Query:  LYFKSLVGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
          ++ +VGSL+YL  TRPD+ ++V  +S++M  PT  H    KR+LRYL GT D+ +F        L  Y D+D
Subjt:  LYFKSLVGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

Arabidopsis top hitse value%identityAlignment
AT3G21000.1 Gag-Pol-related retrotransposon family protein6.4e-0636.36Show/hide
Query:  FVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTI
        F  LD +    +   D T + V+GK  + I +K GK + I NV +VP +  N+LS G+++ K Y+I
Subjt:  FVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTI

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.1e-7738.96Show/hide
Query:  AVELLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITL
        A E   + EA +   W  AMD+EI A++   TWE+ T P  KK +G KWV+KIK N  G +ERYKARLVAKGY+Q++GID+ E FS V +L +++L++ +
Subjt:  AVELLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITL

Query:  AAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQE----NKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVC
        +A  N+ + Q+D+ + FLNG L+EE+Y++ PPGY+ +  +    N V  LKK++YGLKQA R W  + +   +  G ++   +H+ ++K+      L V 
Subjt:  AAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSMKDQE----NKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVC

Query:  LYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSL
        +Y+DD+I   N  +  ++LK+ +   FK+ ++G + Y+LG+E+ +S  GI I Q +Y  ++L++  ++  KP + P++     S H  GD+VD   ++ L
Subjt:  LYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSL

Query:  VGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDS
        +G L YL  TR DI F+V  +S+F E+P   H +   +IL Y+KGT+   LFYSS  E +L+ + D+
Subjt:  VGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDS

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.1e-0839.68Show/hide
Query:  YLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        YLT TRPD+ F+V  +S+F  +  T  ++   ++L Y+KGT+   LFYS++ + +L+ + DSD
Subjt:  YLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

ATMG00810.1 DNA/RNA polymerases superfamily protein2.9e-3035.47Show/hide
Query:  LVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLY
        + + LY+DD++ TG+  ++   L   ++  F M ++G + Y+LGI++K    G+F+SQ +Y  +IL    M++ KP++TP+      S      Y DP  
Subjt:  LVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMSYYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLY

Query:  FKSLVGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD
        F+S+VG+L+YLT TRPDI ++V ++ + M  PT     + KR+LRY+KGT+ + L+   + +  ++ +CDSD
Subjt:  FKSLVGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGTLDYELFYSSSKEFKLEGYCDSD

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.2e-1443.62Show/hide
Query:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQ
        A ++  W  AM EE+ A+ +N TW L   P  +  +G KWVFK K +  G ++R KARLVAKG+ Q +GI + E +S V R  TIR ++ +A Q
Subjt:  ASQNDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGAAGTAAATCAATGTTCGTGGAACTTGATGAATCTGTTGGTGGTGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGCAAATGTAAAATTTTGAT
CAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATACTATTT
TGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTACTAAACATTCAAATTGATGTTGCT
AAATATTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGG
GTTGCCATATGTCAAACATCCAGATCAACTTTGTGAAGGTTGTCTTCATGGAAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTCGAGAGCAAGGAGACCACTGG
AGTTAGTTCACACGGATCTTTATGGACCGATCAAATCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGCCGCAAAACTTGGGTTTACTTT
GTCAAGGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAAGGGAGGTGAATT
CACTTCAAATGAATTCAAAACTTTTTGCACAGAAAATGGAATTCGTCGACCTATGACAGTTCCATTTGCTCCTCAACAAAATGGTGTTTTTGAAAGGAAGAACCGAACAA
TACTCAACATGGCTCGAAGCATGTTGAAATGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTTGAACTTTTGAATTTTGAAGAAGCTTCGCAA
AATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTATCTACTTTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATG
GGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTTGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTT
CTCTCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTACTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGACATTTTTGAATGGATATCTA
GAAGAAGAAGTCTACTTAGAACAACCTCCTGGTTATTCTATGAAAGACCAAGAGAATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAGCAAGCACCAAGAAT
GTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGCATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTT
GTTTGTACATGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACACAAGAATTTAAAATGACAAATATAGGGCTAATGTCA
TATTATCTTGGCATTGAAGTGAAGCAGTCAAAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGT
CGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATTATGTCGATCCTTTATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCA
CACGACCAGATATTCTTTTCAGCGTTGGATTGATGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAAAGGTACG
CTTGACTATGAGTTGTTTTATTCTTCGTCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGAAGTAAATCAATGTTCGTGGAACTTGATGAATCTGTTGGTGGTGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGCAAATGTAAAATTTTGAT
CAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATACTATTT
TGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTACTAAACATTCAAATTGATGTTGCT
AAATATTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGG
GTTGCCATATGTCAAACATCCAGATCAACTTTGTGAAGGTTGTCTTCATGGAAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTCGAGAGCAAGGAGACCACTGG
AGTTAGTTCACACGGATCTTTATGGACCGATCAAATCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGCCGCAAAACTTGGGTTTACTTT
GTCAAGGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAAGGGAGGTGAATT
CACTTCAAATGAATTCAAAACTTTTTGCACAGAAAATGGAATTCGTCGACCTATGACAGTTCCATTTGCTCCTCAACAAAATGGTGTTTTTGAAAGGAAGAACCGAACAA
TACTCAACATGGCTCGAAGCATGTTGAAATGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTTGAACTTTTGAATTTTGAAGAAGCTTCGCAA
AATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTATCTACTTTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATG
GGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTTGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTT
CTCTCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTACTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGACATTTTTGAATGGATATCTA
GAAGAAGAAGTCTACTTAGAACAACCTCCTGGTTATTCTATGAAAGACCAAGAGAATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAGCAAGCACCAAGAAT
GTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGCATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTT
GTTTGTACATGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACACAAGAATTTAAAATGACAAATATAGGGCTAATGTCA
TATTATCTTGGCATTGAAGTGAAGCAGTCAAAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGT
CGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATTATGTCGATCCTTTATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCA
CACGACCAGATATTCTTTTCAGCGTTGGATTGATGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAAAGGTACG
CTTGACTATGAGTTGTTTTATTCTTCGTCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTAG
Protein sequenceShow/hide protein sequence
MCGSKSMFVELDESVGGDIVFGDATKIPVKGKCKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYTILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQIDVA
KYLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLYGPIKSSSFGKNNYFLLFIDDFSRKTWVYF
VKEKSEVFGMFKRFKALVEKESGYYIKALRSDKGGEFTSNEFKTFCTENGIRRPMTVPFAPQQNGVFERKNRTILNMARSMLKCKKMPKEFWAQAVECAVELLNFEEASQ
NDKWKIAMDEEIKAIKKNDTWELSTFPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFSLVARLETIRLLITLAAQNNWKIFQMDVKSTFLNGYL
EEEVYLEQPPGYSMKDQENKVLKLKKALYGLKQAPRMWNSRINKYFLDNGHLRCPYEHSLYIKVNGHGDILVVCLYMDDLIFTGNCASMFEDLKNAMTQEFKMTNIGLMS
YYLGIEVKQSKEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDYVDPLYFKSLVGSLRYLTCTRPDILFSVGLMSRFMESPTTTHLKVAKRILRYLKGT
LDYELFYSSSKEFKLEGYCDSD