; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0105991 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0105991
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:23973509..23974051
RNA-Seq ExpressionCmc04g0105991
SyntenyCmc04g0105991
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032571.1 Beta-galactosidase [Cucumis melo var. makuwa]8.6e-6989.58Show/hide
Query:  YIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHT
        + Y  ++FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPFTLIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHT
Subjt:  YIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHT

Query:  IKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

KAA0034029.1 Beta-galactosidase [Cucumis melo var. makuwa]1.1e-6885.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y  ++FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+D+WGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]9.5e-6885.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y   +FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI+DKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]9.5e-6885.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y   +FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI+DKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]9.5e-6885.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y   +FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI+DKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

TrEMBL top hitse value%identityAlignment
A0A5A7SSP2 Beta-galactosidase4.2e-6989.58Show/hide
Query:  YIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHT
        + Y  ++FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPFTLIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHT
Subjt:  YIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHT

Query:  IKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

A0A5A7SXY5 Beta-galactosidase5.4e-6985.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y  ++FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+D+WGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

A0A5A7VLQ7 Beta-galactosidase4.6e-6885.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y   +FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI+DKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

A0A5D3BJK7 Beta-galactosidase4.6e-6885.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y   +FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI+DKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

A0A5D3C4T4 Beta-galactosidase4.6e-6885.53Show/hide
Query:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS
        F  G P  + Y   +FP  F K DVSSLSCDVCIRAKQHRV FPSQ YKPTQPF LIH+DVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI+DKSEVPS
Subjt:  FSTGPPKLYIYAIFIFPPFF-KFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPS

Query:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        IFQNFYHTIKTQF TKIAILRSDNGREFQNHNLSEFLASKGIVHQTSC YTP
Subjt:  IFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.3e-1634.35Show/hide
Query:  DVSSLSCDVCIRAKQHRVFFPSQSYKP--TQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILR
        ++S   C+ C+  KQ R+ F     K    +P  ++H+DV GP    T   K +FV F+D  T     YLI  KS+V S+FQ+F    +  F  K+  L 
Subjt:  DVSSLSCDVCIRAKQHRVFFPSQSYKP--TQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILR

Query:  SDNGREFQNHNLSEFLASKGIVHQTSCVYTP
         DNGRE+ ++ + +F   KGI +  +  +TP
Subjt:  SDNGREFQNHNLSEFLASKGIVHQTSCVYTP

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.8e-2238.21Show/hide
Query:  CDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILRSDNGREFQ
        CD C+  KQHRV F + S +      L+++DV GP ++ +  G ++FVTFIDD +R  WVY++  K +V  +FQ F+  ++ +   K+  LRSDNG E+ 
Subjt:  CDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILRSDNGREFQ

Query:  NHNLSEFLASKGIVHQTSCVYTP
        +    E+ +S GI H+ +   TP
Subjt:  NHNLSEFLASKGIVHQTSCVYTP

Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein3.1e-1329.85Show/hide
Query:  DVSSLSCDVCI--RAKQHRVFFPSQ-SYKPT-QPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSE--VPSIFQNFYHTIKTQFRTKI
        + S+  C  C+  ++ +HR    S+  Y+ + +PF  +H D++GP      S   +F++F D+ TR  WVY + D+ E  + ++F +    IK QF  ++
Subjt:  DVSSLSCDVCI--RAKQHRVFFPSQ-SYKPT-QPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSE--VPSIFQNFYHTIKTQFRTKI

Query:  AILRSDNGREFQNHNLSEFLASKGIVHQTSCVYT
         +++ D G E+ N  L +F  ++GI   T+C  T
Subjt:  AILRSDNGREFQNHNLSEFLASKGIVHQTSCVYT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.4e-1832.73Show/hide
Query:  HPTLALLNKIVFVAFSTGPPKLYIYAIFIFPPFFKFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLT
        HP  ++LN ++             Y++ +  P  KF    LSC  C+  K ++V F   +   T+P   I++DVW  S + +    R++V F+D  TR T
Subjt:  HPTLALLNKIVFVAFSTGPPKLYIYAIFIFPPFFKFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLT

Query:  WVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        W+Y +  KS+V   F  F + ++ +F+T+I    SDNG EF    L E+ +  GI H TS  +TP
Subjt:  WVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-1733.33Show/hide
Query:  HPTLALLNKIVFVAFSTGPPKLYIYAIFIFPPFFKFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLT
        HP+LA+LN ++             +++ +  P  K     LSC  C   K H+V F + +   ++P   I++DVW  S + +    R++V F+D  TR T
Subjt:  HPTLALLNKIVFVAFSTGPPKLYIYAIFIFPPFFKFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLT

Query:  WVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP
        W+Y +  KS+V   F  F   ++ +F+T+I  L SDNG EF    L ++L+  GI H TS  +TP
Subjt:  WVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATACCTCATGTAGTAGTTTTTCTAGGGTTAGTTTACTGTCATCCTACTTTAGCACTTCTAAACAAGATTGTATTTGTGGCATTTTCGACTGGGCCACCC
AAACTTTACATATATGCAATATTTATTTTCCCACCTTTTTTTAAATTTGATGTCTCTTCTCTATCTTGTGATGTGTGTATCCGGGCTAAACAACATCGAGTCTTT
TTTCCCTCACAATCATATAAACCTACACAACCGTTTACCCTCATCCATAATGACGTTTGGGGTCCTTCCAAGGTCACCACATCCTCGGGAAAGCGGTGGTTTGTA
ACTTTCATAGATGACCATACCCGTCTTACCTGGGTCTACCTTATCACAGATAAATCCGAGGTTCCATCCATTTTCCAAAACTTCTATCATACTATCAAAACACAA
TTTCGTACAAAAATTGCAATTCTTCGAAGTGATAATGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTTGCCTCCAAGGGGATTGTTCACCAAACCTCG
TGTGTCTACACTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATACCTCATGTAGTAGTTTTTCTAGGGTTAGTTTACTGTCATCCTACTTTAGCACTTCTAAACAAGATTGTATTTGTGGCATTTTCGACTGGGCCACCC
AAACTTTACATATATGCAATATTTATTTTCCCACCTTTTTTTAAATTTGATGTCTCTTCTCTATCTTGTGATGTGTGTATCCGGGCTAAACAACATCGAGTCTTT
TTTCCCTCACAATCATATAAACCTACACAACCGTTTACCCTCATCCATAATGACGTTTGGGGTCCTTCCAAGGTCACCACATCCTCGGGAAAGCGGTGGTTTGTA
ACTTTCATAGATGACCATACCCGTCTTACCTGGGTCTACCTTATCACAGATAAATCCGAGGTTCCATCCATTTTCCAAAACTTCTATCATACTATCAAAACACAA
TTTCGTACAAAAATTGCAATTCTTCGAAGTGATAATGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTTGCCTCCAAGGGGATTGTTCACCAAACCTCG
TGTGTCTACACTCCTTAA
Protein sequenceShow/hide protein sequence
MMIPHVVVFLGLVYCHPTLALLNKIVFVAFSTGPPKLYIYAIFIFPPFFKFDVSSLSCDVCIRAKQHRVFFPSQSYKPTQPFTLIHNDVWGPSKVTTSSGKRWFV
TFIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFRTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCVYTP