; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0106011 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0106011
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:23975783..23976145
RNA-Seq ExpressionCmc04g0106011
SyntenyCmc04g0106011
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]1.7e-6094.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

KAA0042053.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.7e-6195.83Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]1.7e-6094.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]1.7e-6094.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]1.7e-6094.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase8.1e-6194.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

A0A5A7TFR5 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-6195.83Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

A0A5A7VLQ7 Beta-galactosidase8.1e-6194.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

A0A5D3BJK7 Beta-galactosidase8.1e-6194.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

A0A5D3C4T4 Beta-galactosidase8.1e-6194.17Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVP+DKEQYQRLVGKLIYLSHTRPDISFA+S+VSQFMQAPYEKHMEAVN+ILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG VID+K TSGYCTFV
Subjt:  SDWAGFVIDKKFTSGYCTFV

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-1335.77Show/hide
Query:  MLGCRPADTPIEFNCKLGNS------DDQVPIDKEQYQRLVGKLIY-LSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRK
        M   +P  TP+  + KL         +++  + K  Y   VG L+Y +  TRPDI+ A+ +VS+F++ P ++H EAV  ILRYL+ T G  L F  ++  
Subjt:  MLGCRPADTPIEFNCKLGNS------DDQVPIDKEQYQRLVGKLIY-LSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRK

Query:  TIEAYTDSDWAGFVIDKKFTSGY
         ++ YTD+D AG + ++K ++GY
Subjt:  TIEAYTDSDWAGFVIDKKFTSGY

P92519 Uncharacterized mitochondrial protein AtMg008101.9e-1938.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML C+P  TP+        S  + P D   ++ +VG L YL+ TRPDIS+A++IV Q M  P     + + ++LRY+K T   GL   K ++  ++A+ D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG    ++ T+G+CTF+
Subjt:  SDWAGFVIDKKFTSGYCTFV

P93290 Uncharacterized mitochondrial protein AtMg002401.8e-1240.24Show/hide
Query:  IYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGFVIDKKFTSGYCTFV
        +YL+ TRPD++FA++ +SQF  A     M+AV K+L Y+K T G+GL +  T+   ++A+ DSDWA     ++  +G+C+ V
Subjt:  IYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGFVIDKKFTSGYCTFV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-2140.83Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        M+  +P  TP+  + KL         D  +Y+ +VG L YL+ TRPDIS+A++ +SQFM  P E+H++A+ +ILRYL  TP  G+  +K N  ++ AY+D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        +DWAG   D   T+GY  ++
Subjt:  SDWAGFVIDKKFTSGYCTFV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.1e-2039.67Show/hide
Query:  MLGCRPADTPIEFNCKLG-NSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYT
        ML  +P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ TRPD+S+A++ +SQ+M  P + H  A+ ++LRYL  TP  G+  +K N  ++ AY+
Subjt:  MLGCRPADTPIEFNCKLG-NSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYT

Query:  DSDWAGFVIDKKFTSGYCTFV
        D+DWAG   D   T+GY  ++
Subjt:  DSDWAGFVIDKKFTSGYCTFV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.8e-2035.83Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        +LGC+P+  P++ +           +D + Y+RL+G+L+YL  TR DISFA++ +SQF +AP   H +AV KIL Y+K T G+GL +       ++ ++D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        + +      ++ T+GYC F+
Subjt:  SDWAGFVIDKKFTSGYCTFV

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.2e-1340.24Show/hide
Query:  IYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGFVIDKKFTSGYCTFV
        +YL+ TRPD++FA++ +SQF  A     M+AV K+L Y+K T G+GL +  T+   ++A+ DSDWA     ++  +G+C+ V
Subjt:  IYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGFVIDKKFTSGYCTFV

ATMG00810.1 DNA/RNA polymerases superfamily protein1.4e-2038.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML C+P  TP+        S  + P D   ++ +VG L YL+ TRPDIS+A++IV Q M  P     + + ++LRY+K T   GL   K ++  ++A+ D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGFVIDKKFTSGYCTFV
        SDWAG    ++ T+G+CTF+
Subjt:  SDWAGFVIDKKFTSGYCTFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATATCAGCGCCTTGTA
GGTAAATTAATTTACTTATCTCATACTCGTCCTGATATTTCCTTTGCTATGAGTATTGTCAGTCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTT
AACAAAATCTTAAGATATTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGA
TTTGTTATTGACAAAAAGTTTACCTCCGGTTATTGTACCTTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATATCAGCGCCTTGTA
GGTAAATTAATTTACTTATCTCATACTCGTCCTGATATTTCCTTTGCTATGAGTATTGTCAGTCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTT
AACAAAATCTTAAGATATTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGA
TTTGTTATTGACAAAAAGTTTACCTCCGGTTATTGTACCTTTGTTTGA
Protein sequenceShow/hide protein sequence
MLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIYLSHTRPDISFAMSIVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAG
FVIDKKFTSGYCTFV