CuGenDBv2

Gene ID	Cmc04g0106521
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome b6-f complex subunit 4
Genome location	CMiso1.1chr04:24505908..24506144
RNA-Seq Expression	Cmc04g0106521
Synteny	Cmc04g0106521
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
InterPro domains	IPR005798 - Cytochrome b/b6, C-terminal IPR036150 - Cytochrome b/b6, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADD31063.1 cytochrome b6/f complex subunit IV protein [Bulnesia arborea]

2.5e-25

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLLIVPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

AHA12711.1 cytochrome b6/f complex subunit IV [Orchidantha fimbriata]

1.1e-25

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+P GLLIVPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

AYP34456.1 cytochrome b6/f complex subunit IV [Orchidantha maxillarioides]

1.1e-25

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+P GLLIVPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

QNR04714.1 cytochrome b6/f complex subunit IV [Pappobolus lanatus var. lanatus]

1.5e-25

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

YP_010014944.1 cytochrome b6/f complex subunit 4 [Epimedium pubescens]

1.5e-25

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

TrEMBL top hits

e value

%identity

Alignment

A0A1L6Z5X7 Cytochrome b6-f complex subunit 4

1.2e-25

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLLIVPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

A0A3G2Z4N4 Cytochrome b6-f complex subunit 4

5.5e-26

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+P GLLIVPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

A0A7H0TUL2 Cytochrome b6-f complex subunit 4

7.2e-26

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

A0A7L8Y2R9 Cytochrome b6-f complex subunit 4

7.2e-26

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

U6A334 Cytochrome b6-f complex subunit 4

5.5e-26

82.89

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGEL  PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+P GLLIVPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

SwissProt top hits

e value

%identity

Alignment

P56774 Cytochrome b6-f complex subunit 4

1.3e-27

81.58

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

Q2L939 Cytochrome b6-f complex subunit 4

1.3e-27

81.58

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

Q49KW7 Cytochrome b6-f complex subunit 4

1.3e-27

81.58

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

Q4VZK4 Cytochrome b6-f complex subunit 4

1.3e-27

81.58

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

Q7FNS2 Cytochrome b6-f complex subunit 4

1.3e-27

81.58

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00730.1 photosynthetic electron transfer D

8.9e-29

81.58

Show/hide

Query:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG
        MIGE   PF TP EILPEWY FPVFQIL  + NKLLGVLLMVS+PAGLL VPF ENVNKFQNP RRPVATTVFLIG
Subjt:  MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATTGGTGAACTCGTATATCCATTTACAACTCCTTTTGAAATATTACCAGAATGGTATGTCTTTCCCGTATTTCAAATACTTTGTATAATGCAAAATAAGTTATTAGG
TGTTCTTTTAATGGTTTCCTTACCGGCGGGATTATTAATTGTACCATTTTGTGAGAATGTCAATAAATTTCAAAATCCACTTCGTCGTCCAGTGGCGACAACTGTCTTTT
TGATAGGTCCTTGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MIGELVYPFTTPFEILPEWYVFPVFQILCIMQNKLLGVLLMVSLPAGLLIVPFCENVNKFQNPLRRPVATTVFLIGPC

Cmc04g0106521 (gene) of Melon (Charmono) v1.1 genome