| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042206.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.3e-144 | 59.38 | Show/hide |
Query: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
+R L+K+I+NEA+VGIP+L++NGKFFCGDCQ+GKQ + +H+ LKECY RVLELLH+DLMG MQTESL GK+YVLVVVDDY +TWV FLK K+DT+++C
Subjt: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
Query: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNV---KYFHVFGS
+LC+ LQREKG+KI ++RSDHGKEF+NED N+F +GIHHEF AP T QQN VV+RKNR LQEMARVMIHA NLPL F AEA + H
Subjt: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNV---KYFHVFGS
Query: TCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMN-DEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSS
TCYILADREY +KWD + +QGIFLGYS NS Y +FN + G+VME INVV+ND +S + Q N ++DET E +T E+ K D+ D K+ +
Subjt: TCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMN-DEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSS
Query: EEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIG
+E+I ++ L+PSAHVKKNH +SSI+GDPSAG+ T+ KEK + LKDEY +N MQEELLQF+RNN+W LV KP+ N+IG
Subjt: EEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIG
Query: TKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
TKW+FKNKTDE+ V +N+ARLVAQGY QV+GVDF++TFAPVARLEAI
Subjt: TKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
|
|
| KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.4e-157 | 73.17 | Show/hide |
Query: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
MRGLEK+IKN+A+VGIPNL+VNG FFC DCQIGKQ R+THKSLKECYTNRVLELLHMDLMG MQT+SLG GKTDTVEIC
Subjt: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
Query: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA----------------
KNLCLKLQRE+ KKITRIRSDHGKEF+NE FNSF L EG HHEFSAP TPQQN VV+RKN+ LQEMARVMIHAKNLPLCF+AEA
Subjt: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA----------------
Query: -----------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEART
RK NVKYFHVFGSTCYILADREY +KWDAR EQGIFL YSQ S Y ++NNR SVMETIN INDLDSAIK MND EDETPNMSE RT
Subjt: -----------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEART
Query: TSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQE
TSTVE SKADN SD PGKSL+KSSEEII KK ELIPSAHV+KNHPA SIIGDPSAGM TR+K+KIDY+KMVA+LCY STIEP T+DS LK+EY LNAMQE
Subjt: TSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQE
Query: ELLQFRRNNV
ELLQF+RNNV
Subjt: ELLQFRRNNV
|
|
| KAA0065371.1 putative mitochondrial protein [Cucumis melo var. makuwa] | 2.1e-161 | 79.38 | Show/hide |
Query: MDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVV
MDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDH
Subjt: MDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVV
Query: QRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIK
ADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIK
Subjt: QRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIK
Query: QMNDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFT
QMNDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFT
Subjt: QMNDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFT
Query: IDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
IDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
Subjt: IDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
|
|
| TYK07876.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.0e-136 | 64.54 | Show/hide |
Query: RVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTT
RVLELLHMDLMG MQTESLGGKRYVLVV DDYSRYTWVCFLKG+TD VEICKNLCLKLQREK GIHHEFSAP T
Subjt: RVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTT
Query: PQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------------------------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLG
PQQN VV+RK R LQEMA VMIHAKNLPLCFWA+ RKPNVKYFHVFGSTCYILADREYRQKWDAR EQGIFLG
Subjt: PQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------------------------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLG
Query: YSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSI
YSQNS Y +FNNR SVM+TINVVI LDS IKQMND ED+TPNMSEARTTS
Subjt: YSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSI
Query: IGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQ
DPS M TR+K+KIDY+KMVADLCYTSTIEP T+DS +KDEY L AMQEELLQFRRNNVW LVSKPEGV+VI TKW+ KNK DE CVTKNKARLVAQ
Subjt: IGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQ
Query: GYTQVEGVDFDETFAPVARLEAI
GYTQVEGVDFDETFA +ARLEAI
Subjt: GYTQVEGVDFDETFAPVARLEAI
|
|
| TYK30677.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.5e-140 | 63.86 | Show/hide |
Query: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
MRGLEKIIKNEA+VGIPNL+VNG FFCGDCQIGKQ R +HKSLKECYTNRVLELLHM+LMG MQTESLGGKR +
Subjt: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
Query: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCY
R R+ + L+E W + RK NVKYFHVFGSTCY
Subjt: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCY
Query: ILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQM-NDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEI
ILADREYRQKWD + EQGIF GYSQNS Y +FNN GS ++TINVVINDLDSAIKQ+ N+EDETPNMSEARTTS++EV KADNP D KSLEKSS+E
Subjt: ILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQM-NDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEI
Query: ITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKW
ITKKSELIPSA VKKNHP SSIIGDPSA M TR+KEKIDYMKMVADLCY ST EP T++S L+DEY LNAMQEELLQFRRNNVW LVSKPEGVNVIGTKW
Subjt: ITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKW
Query: VFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVA
VFKNK DEAGCVTKNKARLVA GYTQVEG+DFDETFA VA
Subjt: VFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVA
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TNK7 Gag-pol polyprotein | 6.9e-158 | 73.17 | Show/hide |
Query: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
MRGLEK+IKN+A+VGIPNL+VNG FFC DCQIGKQ R+THKSLKECYTNRVLELLHMDLMG MQT+SLG GKTDTVEIC
Subjt: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
Query: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA----------------
KNLCLKLQRE+ KKITRIRSDHGKEF+NE FNSF L EG HHEFSAP TPQQN VV+RKN+ LQEMARVMIHAKNLPLCF+AEA
Subjt: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA----------------
Query: -----------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEART
RK NVKYFHVFGSTCYILADREY +KWDAR EQGIFL YSQ S Y ++NNR SVMETIN INDLDSAIK MND EDETPNMSE RT
Subjt: -----------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEART
Query: TSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQE
TSTVE SKADN SD PGKSL+KSSEEII KK ELIPSAHV+KNHPA SIIGDPSAGM TR+K+KIDY+KMVA+LCY STIEP T+DS LK+EY LNAMQE
Subjt: TSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQE
Query: ELLQFRRNNV
ELLQF+RNNV
Subjt: ELLQFRRNNV
|
|
| A0A5A7VI01 Putative mitochondrial protein | 1.0e-161 | 79.38 | Show/hide |
Query: MDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVV
MDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDH
Subjt: MDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVV
Query: QRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIK
ADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIK
Subjt: QRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIK
Query: QMNDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFT
QMNDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFT
Subjt: QMNDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFT
Query: IDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
IDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
Subjt: IDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
|
|
| A0A5D3CBZ0 Gag-pol polyprotein | 2.0e-136 | 64.54 | Show/hide |
Query: RVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTT
RVLELLHMDLMG MQTESLGGKRYVLVV DDYSRYTWVCFLKG+TD VEICKNLCLKLQREK GIHHEFSAP T
Subjt: RVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTT
Query: PQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------------------------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLG
PQQN VV+RK R LQEMA VMIHAKNLPLCFWA+ RKPNVKYFHVFGSTCYILADREYRQKWDAR EQGIFLG
Subjt: PQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------------------------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLG
Query: YSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSI
YSQNS Y +FNNR SVM+TINVVI LDS IKQMND ED+TPNMSEARTTS
Subjt: YSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMND-EDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEIITKKSELIPSAHVKKNHPASSI
Query: IGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQ
DPS M TR+K+KIDY+KMVADLCYTSTIEP T+DS +KDEY L AMQEELLQFRRNNVW LVSKPEGV+VI TKW+ KNK DE CVTKNKARLVAQ
Subjt: IGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQ
Query: GYTQVEGVDFDETFAPVARLEAI
GYTQVEGVDFDETFA +ARLEAI
Subjt: GYTQVEGVDFDETFAPVARLEAI
|
|
| A0A5D3DSN1 Gag-pol polyprotein | 2.6e-144 | 59.38 | Show/hide |
Query: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
+R L+K+I+NEA+VGIP+L++NGKFFCGDCQ+GKQ + +H+ LKECY RVLELLH+DLMG MQTESL GK+YVLVVVDDY +TWV FLK K+DT+++C
Subjt: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
Query: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNV---KYFHVFGS
+LC+ LQREKG+KI ++RSDHGKEF+NED N+F +GIHHEF AP T QQN VV+RKNR LQEMARVMIHA NLPL F AEA + H
Subjt: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNV---KYFHVFGS
Query: TCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMN-DEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSS
TCYILADREY +KWD + +QGIFLGYS NS Y +FN + G+VME INVV+ND +S + Q N ++DET E +T E+ K D+ D K+ +
Subjt: TCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMN-DEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSS
Query: EEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIG
+E+I ++ L+PSAHVKKNH +SSI+GDPSAG+ T+ KEK + LKDEY +N MQEELLQF+RNN+W LV KP+ N+IG
Subjt: EEIITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIG
Query: TKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
TKW+FKNKTDE+ V +N+ARLVAQGY QV+GVDF++TFAPVARLEAI
Subjt: TKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
|
|
| A0A5D3E3N1 Gag-pol polyprotein | 1.7e-140 | 63.86 | Show/hide |
Query: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
MRGLEKIIKNEA+VGIPNL+VNG FFCGDCQIGKQ R +HKSLKECYTNRVLELLHM+LMG MQTESLGGKR +
Subjt: MRGLEKIIKNEALVGIPNLNVNGKFFCGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEIC
Query: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCY
R R+ + L+E W + RK NVKYFHVFGSTCY
Subjt: KNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEARKPNVKYFHVFGSTCY
Query: ILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQM-NDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEI
ILADREYRQKWD + EQGIF GYSQNS Y +FNN GS ++TINVVINDLDSAIKQ+ N+EDETPNMSEARTTS++EV KADNP D KSLEKSS+E
Subjt: ILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQM-NDEDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEI
Query: ITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKW
ITKKSELIPSA VKKNHP SSIIGDPSA M TR+KEKIDYMKMVADLCY ST EP T++S L+DEY LNAMQEELLQFRRNNVW LVSKPEGVNVIGTKW
Subjt: ITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKW
Query: VFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVA
VFKNK DEAGCVTKNKARLVA GYTQVEG+DFDETFA VA
Subjt: VFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVA
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.9e-12 | 44 | Show/hide |
Query: AMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEA
A+ EL + NN W + +PE N++ ++WVF K +E G + KARLVA+G+TQ +D++ETFAPVAR+ +
Subjt: AMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEA
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.0e-46 | 29.13 | Show/hide |
Query: CGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEF
C C GKQ R + ++ E N +L+L++ D+ G M+ ES+GG +Y + +DD SR WV LK K ++ + ++RE G+K+ R+RSD+G E+
Subjt: CGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKEF
Query: NNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------RKPN----------------VKYFH--VFGSTC
+ +F + GI HE + P TPQ N V +R NR + E R M+ LP FW EA R P+ V Y H VFG
Subjt: NNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------RKPN----------------VKYFH--VFGSTC
Query: YILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMNDEDE------TPNMSEARTTSTVEVSKADNPSDDPGKSLE
+ +E R K D + IF+GY Y +++ V+ + +VV +S ++ D E PN +TS S A++ +D+ + E
Subjt: YILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVINDLDSAIKQMNDEDE------TPNMSEARTTSTVEVSKADNPSDDPGKSLE
Query: KSSEEIITKKSELIPSAHVKKNHPASS------IIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYR---LNAMQEELLQFRRNNVWM
+ E + ++ E + + HP + + +R+ +Y+ + D EP ++ L + + AMQEE+ ++N +
Subjt: KSSEEIITKKSELIPSAHVKKNHPASS------IIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDSTLKDEYR---LNAMQEELLQFRRNNVWM
Query: LVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
LV P+G + KWVFK K D + + KARLV +G+ Q +G+DFDE F+PV ++ +I
Subjt: LVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
|
|
| P92520 Uncharacterized mitochondrial protein AtMg00820 | 6.7e-17 | 44.07 | Show/hide |
Query: MHTRKKEKIDYMKMVADLCYTSTI--EPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQV
M TR K I+ + L T+TI EP ++ LKD AMQEEL RN W+LV P N++G KWVFK K G + + KARLVA+G+ Q
Subjt: MHTRKKEKIDYMKMVADLCYTSTI--EPFTIDSTLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQV
Query: EGVDFDETFAPVARLEAI
EG+ F ET++PV R I
Subjt: EGVDFDETFAPVARLEAI
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.3e-23 | 23.44 | Show/hide |
Query: LEKIIKNEALVGIPNLNVNGKFF-CGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKN
L +I N +L LN + KF C DC I K + S + R LE ++ D+ S RY ++ VD ++RYTW+ LK K+ E
Subjt: LEKIIKNEALVGIPNLNVNGKFF-CGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKTDTVEICKN
Query: LCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA------------------
L+ +I SD+G EF +F GI H S P TP+ N + +RK+R + E ++ ++P +W A
Subjt: LCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA------------------
Query: ---------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFN-----------------------------------------
PN VFG CY + K D + Q +FLGYS Y +
Subjt: ---------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFN-----------------------------------------
Query: -----------------------------NRPGSVMETINVVINDLDS-------------AIKQMNDEDET-PNMSEARTTSTVEVSKADNPSDDPGKS
+ P + V ++LDS A +Q + T P ++ +T S+ S+ + ++ P +
Subjt: -----------------------------NRPGSVMETINVVINDLDS-------------AIKQMNDEDET-PNMSEARTTSTVEVSKADNPSDDPGKS
Query: LEKSSEEIITKKSELIPSAHVKKNH----PASSIIGDP----------------SAGMHTRKKEKI--DYMKMVADLCYTSTIEPFTIDSTLKDEYRLNA
+ S + S P+ + P S +I P + M TR K I K + + EP T LKDE NA
Subjt: LEKSSEEIITKKSELIPSAHVKKNH----PASSIIGDP----------------SAGMHTRKKEKI--DYMKMVADLCYTSTIEPFTIDSTLKDEYRLNA
Query: MQEELLQFRRNNVWMLVSKPEG-VNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
M E+ N+ W LV P V ++G +W+F K + G + + KARLVA+GY Q G+D+ ETF+PV + +I
Subjt: MQEELLQFRRNNVWMLVSKPEG-VNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.1e-22 | 23.16 | Show/hide |
Query: LEKIIKNEALVGIPNLNVNGKFF-CGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKT---DTVEI
L +I N +L P LN + K C DC I K + S +++ LE ++ D+ S+ RY ++ VD ++RYTW+ LK K+ DT I
Subjt: LEKIIKNEALVGIPNLNVNGKFF-CGDCQIGKQIRATHKSLKECYTNRVLELLHMDLMGLMQTESLGGKRYVLVVVDDYSRYTWVCFLKGKT---DTVEI
Query: CKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------------
K+L ++ +I + SD+G EF + GI H S P TP+ N + +RK+R + EM ++ ++P +W A
Subjt: CKNLCLKLQREKGKKITRIRSDHGKEFNNEDFNSFFLFEGIHHEFSAPTTPQQNDVVQRKNRMLQEMARVMIHAKNLPLCFWAEA---------------
Query: ------------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVIND---------LDSAIKQMNDEDE
+ PN + VFG CY R K + + +Q F+GYS Y + G + + +V ++ + Q D
Subjt: ------------RKPNVKYFHVFGSTCYILADREYRQKWDARLEQGIFLGYSQNSPTYTIFNNRPGSVMETINVVIND---------LDSAIKQMNDEDE
Query: TPNM------------------------------SEARTTSTVEVSKADNPSD----------------------------------------DPGKSLE
PN S T +VS ++ PS +P
Subjt: TPNM------------------------------SEARTTSTVEVSKADNPSD----------------------------------------DPGKSLE
Query: KSSEEIITKKSELIPSAHV--------KKNHPASSIIGDP---------------------SAGMHTRKKEKI--DYMKMVADLCYTSTIEPFTIDSTLK
S + I S H+ + N P+SS P + M TR K+ I K + EP T +K
Subjt: KSSEEIITKKSELIPSAHV--------KKNHPASSIIGDP---------------------SAGMHTRKKEKI--DYMKMVADLCYTSTIEPFTIDSTLK
Query: DEYRLNAMQEELLQFRRNNVWMLV-SKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
D+ AM E+ N+ W LV P V ++G +W+F K + G + + KARLVA+GY Q G+D+ ETF+PV + +I
Subjt: DEYRLNAMQEELLQFRRNNVWMLV-SKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAI
|
|
