CuGenDBv2

Gene ID	Cmc04g0106711
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	BED-type domain-containing protein
Genome location	CMiso1.1chr04:24856261..24856806
RNA-Seq Expression	Cmc04g0106711
Synteny	Cmc04g0106711
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR003656 - Zinc finger, BED-type IPR036236 - Zinc finger C2H2 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ACX85638.1 putative transposase [Cucumis melo]

3.3e-92

93.37

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Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM A
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

KAA0026183.1 putative transposase [Cucumis melo var. makuwa]

3.3e-92

93.37

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Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM A
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

TYK06161.1 putative transposase [Cucumis melo var. makuwa]

1.3e-93

95.03

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Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSESSLMAA
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

TYK30761.1 putative transposase [Cucumis melo var. makuwa]

4.9e-88

90.61

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Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        M SF VDETSNQSCSSPVLGKRK VKPP   WEHFIKVEGCDPKYPRAACKHC  SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSESS MAA
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

TYK30776.1 putative transposase [Cucumis melo var. makuwa]

3.3e-92

93.37

Show/hide

Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM A
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SNJ1 Putative transposase

1.6e-92

93.37

Show/hide

Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM A
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

A0A5D3C2L4 Putative transposase

6.4e-94

95.03

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Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSESSLMAA
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

A0A5D3E4G3 Putative transposase

1.6e-92

93.37

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Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM A
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

A0A5D3E590 Putative transposase

2.4e-88

90.61

Show/hide

Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        M SF VDETSNQSCSSPVLGKRK VKPP   WEHFIKVEGCDPKYPRAACKHC  SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSESS MAA
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

D0UIX2 Putative transposase

1.6e-92

93.37

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Query:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA
        MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACDSKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM A
Subjt:  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAA

Query:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
        S TQEN RKMLARMVILDELPFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT
Subjt:  SLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

SwissProt top hits

e value

%identity

Alignment

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 4

1.8e-13

34.81

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Query:  KPPSLVWEHFIKVEGCDPKYPRAACKHCGTS--YACDSKRNGTMNLKRHL-EKCKMYVNSLEDNIERERDS--ESSLMAASLTQENFRKMLARMVILDEL
        K  S +WEHF  V+  D    RA+C HC  S  Y+  SK +GT +L RH+ E C++    L+D  +  R +   SS   AS  QE     LA+M+IL++ 
Subjt:  KPPSLVWEHFIKVEGCDPKYPRAACKHCGTS--YACDSKRNGTMNLKRHL-EKCKMYVNSLEDNIERERDS--ESSLMAASLTQENFRKMLARMVILDEL

Query:  PFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLT
        P   V+   F  F  ++ P F +    T+  + + +Y+KEK  L+ AL     R+ LT
Subjt:  PFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLT

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTTCATTCTCGGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAACCGGTTAAACCACCATCATTGGTATGGGAACATTTT
ATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAACATTGTGGGACTTCATATGCTTGTGATTCCAAAAGAAATGGTACCATGAATTTAAAA
AGACATTTAGAGAAATGTAAGATGTATGTAAATTCATTGGAAGATAATATTGAAAGAGAGAGAGATTCTGAAAGTAGTTTGATGGCTGCATCATTGACTCAAGAA
AATTTTAGAAAAATGCTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAGTTCGTAGAAACTGAAGGGTTTCACCAATTTTGTCGGGCATTAAATCCAAAG
TTTGTGATTCCATCAAGAGTAACCGTTGCAAAAGATTGTTTTCAAATGTATATGAAGGAGAAAAAAAAGTTAAAAAATGCATTAACTCGAAGTGGCCAAAGAGTT
TGTTTAACAACAGATACGTAG

mRNA sequence

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Protein sequence

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MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAASLTQE
NFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDT

Cmc04g0106711 (gene) of Melon (Charmono) v1.1 genome