; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0106781 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0106781
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionATP-dependent Clp protease ATP-binding subunit ClpC
Genome locationCMiso1.1chr04:24933572..24936132
RNA-Seq ExpressionCmc04g0106781
SyntenyCmc04g0106781
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0034605 - cellular response to heat (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR003959 - ATPase, AAA-type, core
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061986.1 ATP-dependent Clp protease ATP-binding subunit clpA-like protein CD4B [Cucumis melo var. makuwa]5.6e-4797.2Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVT AKFDD
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD

Query:  LVHAIDT
        LVHAIDT
Subjt:  LVHAIDT

KAA0066397.1 chaperone protein ClpC [Cucumis melo var. makuwa]5.2e-4594.34Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD
        MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQPLAK+LGIKVVPTFKILKDKKVVKEVT AKFDD
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD

Query:  LVHAID
        LVHAID
Subjt:  LVHAID

KAF5807089.1 putative ClpA/B family, UVR domain, AAA+ ATPase domain, Clp ATPase [Helianthus annuus]1.2e-2597.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

KAG6747268.1 hypothetical protein POTOM_049664 [Populus tomentosa]4.2e-2686.08Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVP
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEI+LFIDEVHTLIG GAAEGAIDA NILKPALARGELQ    +LG+  VP
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVP

VAI29239.1 unnamed protein product [Triticum turgidum subsp. durum]1.2e-2597.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

TrEMBL top hitse value%identityAlignment
A0A1B6PCG3 Uncharacterized protein5.9e-2697.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

A0A1S3VVE4 chaperone protein ClpC, chloroplastic5.9e-2697.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

A0A5A7V664 ATP-dependent Clp protease ATP-binding subunit clpA-like protein CD4B2.7e-4797.2Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVT AKFDD
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD

Query:  LVHAIDT
        LVHAIDT
Subjt:  LVHAIDT

A0A5A7VH27 Chaperone protein ClpC2.5e-4594.34Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD
        MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQPLAK+LGIKVVPTFKILKDKKVVKEVT AKFDD
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDD

Query:  LVHAID
        LVHAID
Subjt:  LVHAID

K3Z3M1 Uncharacterized protein5.9e-2697.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

SwissProt top hitse value%identityAlignment
P31541 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic1.6e-2897.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

P31542 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic1.6e-2897.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

Q2QVG9 Chaperone protein ClpC2, chloroplastic1.6e-2897.01Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

Q9FI56 Chaperone protein ClpC1, chloroplastic3.5e-2895.52Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

Q9SXJ7 Chaperone protein ClpC2, chloroplastic3.5e-2895.52Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

Arabidopsis top hitse value%identityAlignment
AT2G25140.1 casein lytic proteinase B45.8e-1860.29Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MG L+AG K+RG+FEERLK +M+E+  S+ + ILFIDE+HT++G GA +GA+DA+N+LKP L RGEL+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

AT3G48870.1 Clp ATPase2.5e-2995.52Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

AT3G48870.2 Clp ATPase2.5e-2995.52Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

AT5G15450.1 casein lytic proteinase B31.2e-1861.76Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MG L+AG KYRGEFE+RLK +++E+  S+ +IILFIDE+HT++G GA  GA+DA N+LKP L RGEL+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ

AT5G50920.1 CLPC homologue 12.5e-2995.52Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIG GAAEGAIDA NILKPALARGELQ
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTCTTGTAGCTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAACAAAGTGATGAAATAATTCTATTTATT
GATGAGGTGCATACATTAATTGGAGTAGGGGCTGCAGAAGGAGCTATTGATGCAACAAACATATTAAAACCTGCCCTTGCAAGGGGTGAATTGCAGCCATTGGCA
AAGAAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAGAAGGTCGTTAAAGAAGTAACTAGAGCAAAGTTCGATGATTTGGTTCATGCCATT
GATACTAATGATTGA
mRNA sequenceShow/hide mRNA sequence
GATTGTTTATTTTAAAGTACTTTTCATAACTTAGTATAACCTTTTTGTTGTAGTTAAGGTGTTTGAAAAAATATCTGAGAGATCTTCACTAGATTTTCATATTTA
CTAATGTGGCAGCTATTGGGTCTCCATGGTTATCATTAAAGTTTAACTTTATTTTGAGATGTATTTACGAAACTGTGAGCTATAAAATATGTTTTCTTGTCATGT
TTCATGAGTAGAAATCTTCATGGAGAGTTTGAAGACTTGTCACAGACTTAAGCTAATACAATTTCGTACTCATCTTTTTCATTAGAGAAAAGTCATTCTACTGAA
AAAAAGAAGAGATATTCTCCCTCTCTTCCTTTTGTTGTGGTGGAACTCATAGAAATGACTTTTCCTTTTTCGATTTTGGTTTTATAGTAAGTGAGTGGTCCAGGG
GCTTTATAAAATAGCTGGAAGCAAACTCAATGGCTTGATTGTTGGGGCTTGGGGATGTCTTTAAGAGAAAAAGATCATGGAAGTATCAAAGAGATACATAGGAGA
ACAAATGAGATGCAGAAGATGGGTTACAAGCGTTCAACAAAGAAGTGCAAAGAAAAATGGGAAAATATGAACAAATATTTCAAAAGGACTATTGTAACTGGGAAG
GCTAGTATTGCAAATGATGCTTGTTAGCAGCAGCAGACAGTATTTATTTCTACCAAACAGAAGTATACAAGTAGGCTGCCCTTTGCTAGCAGCAAACAAGACAAG
CAACAGAAACTCTGTATGATATTTATTTCTGGTTATAATCTTGGATATGGGCCTTCTTGTAGCTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAA
ACTGATGGAGGAAATAAAACAAAGTGATGAAATAATTCTATTTATTGATGAGGTGCATACATTAATTGGAGTAGGGGCTGCAGAAGGAGCTATTGATGCAACAAA
CATATTAAAACCTGCCCTTGCAAGGGGTGAATTGCAGCCATTGGCAAAGAAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAGAAGGTCGT
TAAAGAAGTAACTAGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATACTAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTGTAGATAGCCAGGCG
ATCGTTGAAGGTTGAAGACTGAGAAGGCGTTTAGAATTTCTTATTTAAGTCTTGTATTAGGATCTTGTT
Protein sequenceShow/hide protein sequence
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGVGAAEGAIDATNILKPALARGELQPLAKKLGIKVVPTFKILKDKKVVKEVTRAKFDDLVHAI
DTND