CuGenDBv2

Gene ID	Cmc04g0106791
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:24977051..24979272
RNA-Seq Expression	Cmc04g0106791
Synteny	Cmc04g0106791
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.78

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQAVEF +SSDGGLLFERRLCV SDS VKTELL EAHSSPFSMHPGSTKMY+D+KRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMD ITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.78

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRP+VS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQAVEF +SSDGGL FE RLCV SDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLS+PEWKWENVSMD ITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.78

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQAVEF +SSDGGLLFERRLCV SDSAVKTELL EAHSSPFSMHPGSTKMYQDLKR+
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMD I GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

KAA0065422.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

96.83

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPDGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAP              QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPDGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI

Query:  WRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
        WRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
Subjt:  WRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFV
        TVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFV
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFV

Query:  SKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
        SKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
Subjt:  SKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA

Query:  RFTSKFWKGLQTAMGTRLDFSTAFHP
        RFTSKFWKGLQTAMGT    +    P
Subjt:  RFTSKFWKGLQTAMGTRLDFSTAFHP

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.19

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQ  EF +SSDGGLLFERRLCV SDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMD ITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U330 Reverse transcriptase

0.0e+00

93.78

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQAVEF +SSDGGLLFERRLCV SDS VKTELL EAHSSPFSMHPGSTKMY+D+KRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMD ITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

A0A5A7UAA8 Reverse transcriptase

0.0e+00

93.78

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRP+VS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQAVEF +SSDGGL FE RLCV SDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLS+PEWKWENVSMD ITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

A0A5A7UP94 Pol protein

0.0e+00

93.78

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQAVEF +SSDGGLLFERRLCV SDSAVKTELL EAHSSPFSMHPGSTKMYQDLKR+
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMD I GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

A0A5A7VAU4 Reverse transcriptase

0.0e+00

96.83

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Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPDGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAP              QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPDGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI

Query:  WRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
        WRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
Subjt:  WRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFV
        TVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFV
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFV

Query:  SKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
        SKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
Subjt:  SKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA

Query:  RFTSKFWKGLQTAMGTRLDFSTAFHP
        RFTSKFWKGLQTAMGT    +    P
Subjt:  RFTSKFWKGLQTAMGTRLDFSTAFHP

A0A5D3BPI1 Reverse transcriptase

0.0e+00

94.19

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Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVF EEL GLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRY LPRI+DLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIE  T W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+LKQKLVTAPVLTVPD              GLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLA AGQ  EF +SSDGGLLFERRLCV SDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMD ITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
        LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.4e-104

31.21

Show/hide

Query:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV
        + +++ D+ +E     LP P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK   
Subjt:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV

Query:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA
         N Y LP I  L  ++QG+ +F+K+DL+S YH +R++ GD  K AFR   G +E++VM + ++ A A F   +N +  E  ++ V+ ++DDILI SK+E+
Subjt:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA

Query:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF
        EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+    W +P    E+R FLG   Y R+F+   S++  PL  L +K   +
Subjt:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF

Query:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK
         W+     + +++KQ LV+ PVL   D               +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E 
Subjt:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK

Query:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR
         +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    +
Subjt:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR

Query:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV
         +++   +ND  L+    L    + VE  +    GLL   +  + + +D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  
Subjt:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV

Query:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK
        CQ  K+   KP G LQP+   E  WE++SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK

Query:  FWKGLQTAMGTRLDFSTAFHP
         WK         + FS  + P
Subjt:  FWKGLQTAMGTRLDFSTAFHP

P0CT35 Transposon Tf2-2 polyprotein

1.4e-104

31.21

Show/hide

Query:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV
        + +++ D+ +E     LP P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK   
Subjt:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV

Query:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA
         N Y LP I  L  ++QG+ +F+K+DL+S YH +R++ GD  K AFR   G +E++VM + ++ A A F   +N +  E  ++ V+ ++DDILI SK+E+
Subjt:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA

Query:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF
        EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+    W +P    E+R FLG   Y R+F+   S++  PL  L +K   +
Subjt:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF

Query:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK
         W+     + +++KQ LV+ PVL   D               +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E 
Subjt:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK

Query:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR
         +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    +
Subjt:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR

Query:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV
         +++   +ND  L+    L    + VE  +    GLL   +  + + +D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  
Subjt:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV

Query:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK
        CQ  K+   KP G LQP+   E  WE++SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK

Query:  FWKGLQTAMGTRLDFSTAFHP
         WK         + FS  + P
Subjt:  FWKGLQTAMGTRLDFSTAFHP

P0CT36 Transposon Tf2-3 polyprotein

1.4e-104

31.21

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Query:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV
        + +++ D+ +E     LP P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK   
Subjt:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV

Query:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA
         N Y LP I  L  ++QG+ +F+K+DL+S YH +R++ GD  K AFR   G +E++VM + ++ A A F   +N +  E  ++ V+ ++DDILI SK+E+
Subjt:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA

Query:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF
        EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+    W +P    E+R FLG   Y R+F+   S++  PL  L +K   +
Subjt:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF

Query:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK
         W+     + +++KQ LV+ PVL   D               +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E 
Subjt:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK

Query:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR
         +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    +
Subjt:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR

Query:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV
         +++   +ND  L+    L    + VE  +    GLL   +  + + +D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  
Subjt:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV

Query:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK
        CQ  K+   KP G LQP+   E  WE++SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK

Query:  FWKGLQTAMGTRLDFSTAFHP
         WK         + FS  + P
Subjt:  FWKGLQTAMGTRLDFSTAFHP

P0CT37 Transposon Tf2-4 polyprotein

1.4e-104

31.21

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Query:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV
        + +++ D+ +E     LP P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK   
Subjt:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV

Query:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA
         N Y LP I  L  ++QG+ +F+K+DL+S YH +R++ GD  K AFR   G +E++VM + ++ A A F   +N +  E  ++ V+ ++DDILI SK+E+
Subjt:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA

Query:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF
        EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+    W +P    E+R FLG   Y R+F+   S++  PL  L +K   +
Subjt:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF

Query:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK
         W+     + +++KQ LV+ PVL   D               +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E 
Subjt:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK

Query:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR
         +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    +
Subjt:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR

Query:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV
         +++   +ND  L+    L    + VE  +    GLL   +  + + +D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  
Subjt:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV

Query:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK
        CQ  K+   KP G LQP+   E  WE++SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK

Query:  FWKGLQTAMGTRLDFSTAFHP
         WK         + FS  + P
Subjt:  FWKGLQTAMGTRLDFSTAFHP

P0CT41 Transposon Tf2-12 polyprotein

1.4e-104

31.21

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Query:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV
        + +++ D+ +E     LP P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK   
Subjt:  VVRDYLDVFSE-ELSGLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV

Query:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA
         N Y LP I  L  ++QG+ +F+K+DL+S YH +R++ GD  K AFR   G +E++VM + ++ A A F   +N +  E  ++ V+ ++DDILI SK+E+
Subjt:  KNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREFLDTFVIVFIDDILICSKTEA

Query:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF
        EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+    W +P    E+R FLG   Y R+F+   S++  PL  L +K   +
Subjt:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF

Query:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK
         W+     + +++KQ LV+ PVL   D               +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E 
Subjt:  VWSKACEDSFQSLKQKLVTAPVLTVPD--------------GLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EK

Query:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR
         +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    +
Subjt:  IQIFTDHKSLKYFFTQKE--LNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR

Query:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV
         +++   +ND  L+    L    + VE  +    GLL   +  + + +D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  
Subjt:  QRIIDAQSNDPYLVEKRGLAGAGQAVEFFVSSDGGLLFERR--LCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLV

Query:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK
        CQ  K+   KP G LQP+   E  WE++SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  CQQVKAPRQKPAGLLQPLSVPEWKWENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK

Query:  FWKGLQTAMGTRLDFSTAFHP
         WK         + FS  + P
Subjt:  FWKGLQTAMGTRLDFSTAFHP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

4.1e-27

45.6

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+E    WP P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQSLKQKLVTAPVLTVPD
        ++    +F++LK  + T PVL +PD
Subjt:  SKACEDSFQSLKQKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGATGTATCCCTGTCATCAGAACCAGTGGTAAGG
GACTATCTAGATGTCTTTTCCGAAGAACTTTCAGGGTTACCTCCTCATAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCC
CCATACAGAATGGCCCCAGCAGAGTTAAAAGAACTGAAGGTGCAATTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCA
GTTTTATTTGTTAAGAAGAAGGATGGATCAATGCGCCTATGCATTGACTATCGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCTCTTGCCCAGGATCAAC
GATCTGTTTGACCAGTTACAGGGAGCTATAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGACGTACCGAAGACGGCC
TTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTTGGTTGACGAATGCTTCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTT
CTAGACACTTTTGTGATCGTGTTTATTGATGACATCTTGATATGTTCCAAGACGGAGGCCGAGCATGAGGAACATTTACGTATGGTTCTGCAAACCCTTCGGGAT
AATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGTTGGAGTTTCTGTGGATCCAGCTAAG
ATAGAGGTAGCCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTTTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGT
ATAGCCACCCCTCTTACCCAGTTGACCAGGAAAGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAGCCTTAAACAGAAGCTAGTTACTGCA
CCGGTTCTTACTGTACCTGATGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCT
ACACATGATTTAGAGTTGGCAGCAGTAGTTTTTGCATTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGACCATAAGAGCTTGAAA
TATTTCTTTACTCAAAAGGAATTGAATATGAGGCAGGGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTG
GTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGTCAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTG
GGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGT
CTAGCAGGGGCAGGGCAAGCTGTTGAGTTCTTCGTATCCTCTGATGGTGGACTGTTGTTTGAGAGGCGTCTCTGTGTGTCGTCAGATAGTGCGGTTAAAACAGAA
TTATTATTCGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAATATGAAGAGAGAG
GTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCGTACCGGAATGGAAGTGG
GAAAACGTGTCCATGGATTTGATTACAGGACTGCCAAGAACTTTGAGGGGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCGCACTTTGTT
CCGGGTAAATCCACCTACACCGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCC
CGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCCTTCCATCCATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFSEELSGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAP
VLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRINDLFDQLQGAIVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFWLTNASAVFMDLMNRVFREF
LDTFVIVFIDDILICSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEVATSWPRPSTVSEVRSFLGLAGYYRRFVENFSR
IATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTAPVLTVPDGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK
YFFTQKELNMRQGRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRG
LAGAGQAVEFFVSSDGGLLFERRLCVSSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKW
ENVSMDLITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP

Cmc04g0106791 (gene) of Melon (Charmono) v1.1 genome