; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0106801 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0106801
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr04:24994511..24995296
RNA-Seq ExpressionCmc04g0106801
SyntenyCmc04g0106801
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0009231 - riboflavin biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003935 - GTP cyclohydrolase II activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP63416.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]6.4e-10776.08Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+  VPI+KGDKFSL QC KN+LER QME IPYAS+VGS++YAQ CTRPDISFAAGMLGRYQSNPGM+HWK AKKVL+YLQGTK +MLTY+RS+HL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVD+RKST GY+F+LA GAISWKSAKQ+++A+STME EF              NFISG GIVD IAKPL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI
        K AKHMELKYF VKEEVQKQRVSIEHIST LMI DPLTKG PPKTF  HV++MGI
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI

RZB61294.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]4.4e-10878.57Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+S VPIQK DKFSL QC KN+LER QME I YAS+VGS++YAQTCTRPDISFA GMLGRYQSNPGM+HWK AKKVL+YLQGTKD+MLTYKRSDHL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVDTRKST G++FLLA GAISWKSAKQS++AASTME EF              NFISG GIVD IA+PL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEH
          AKHMELKYFVVKEEVQKQRVSIEHISTKLMI DPLTKG PPKTF  HVE+
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEH

RZC12926.1 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Glycine soja]7.5e-10877.69Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+S VPIQKGDKFSL QC KN+LER QME IPY S+VGS++YA+TCTRPDISFA GMLGRYQSNPGM+HWK AKKVL+YLQGTKD+MLTYKRSDHL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVDTRKST G++FLLA GA+SWKSAKQS++AASTME EF              NFISG GIVD IA+PL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVE
           KHMELKYF VKEEVQKQRVSIEHISTKLMI DPLTKG PPKTF  HVE
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVE

RZC25410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]1.7e-10776.65Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+S VPIQKGDKFSL QC KN+LER QME IPYAS+VGS++YAQTCTRPDISFA GMLGRYQSNPGM+HWK AKKVL+YLQGTKD++LTYKRSDHL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVDTRKST G++FLLA GAISWKSAKQS++AASTME  F              NFISG GIVD IA+PL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGINR
          AKHMELKYF VKEEVQKQRVSIEHI+TKLMI DPLTKG PPKTF  +VE    NR
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGINR

XP_031127470.1 secreted RxLR effector protein 161-like [Ipomoea triloba]7.5e-10876.08Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+SV PIQKGD FSLMQC KNELER +ME IPYAS+VGSL+YAQTCTRPDISFA GMLGRYQSNPGMDHWK AKKVL+YLQGTK+YMLTYKRSD L
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGY+DSDF GC+DTRKSTFGYLFLLAEGAISWKSAKQ++IAASTME EF              NFISG GIVD IAKPL+IYCDN+A VFFS+NDKY+
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI
          AKH++LKY  VKE+  ++RVSIEHI+T+LMI DPLTK  PPK FN HVE MGI
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI

TrEMBL top hitse value%identityAlignment
A0A151T328 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-10575.69Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+S VPIQKGDKFSL QC KN+LER QME I YAS VGS++Y Q CTRPDISFAA MLGRYQSNPGM+HWK AKKVL+YLQGTK +MLTY+RS+HL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVD+RKST GY+F+LA GAISWKSAKQ+++A+STME EF              NFISG GIVD IAKPL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI
        K AKHMELKYF VKEEVQKQRVSIEHIST LMI DPLTKG PPKTF  HV++MGI
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI

A0A151T8R5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment)3.1e-10776.08Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+  VPI+KGDKFSL QC KN+LER QME IPYAS+VGS++YAQ CTRPDISFAAGMLGRYQSNPGM+HWK AKKVL+YLQGTK +MLTY+RS+HL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVD+RKST GY+F+LA GAISWKSAKQ+++A+STME EF              NFISG GIVD IAKPL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI
        K AKHMELKYF VKEEVQKQRVSIEHIST LMI DPLTKG PPKTF  HV++MGI
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGI

A0A445GJ88 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-10878.57Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+S VPIQK DKFSL QC KN+LER QME I YAS+VGS++YAQTCTRPDISFA GMLGRYQSNPGM+HWK AKKVL+YLQGTKD+MLTYKRSDHL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVDTRKST G++FLLA GAISWKSAKQS++AASTME EF              NFISG GIVD IA+PL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEH
          AKHMELKYFVVKEEVQKQRVSIEHISTKLMI DPLTKG PPKTF  HVE+
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEH

A0A445KPV1 GTP cyclohydrolase II3.7e-10877.69Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+S VPIQKGDKFSL QC KN+LER QME IPY S+VGS++YA+TCTRPDISFA GMLGRYQSNPGM+HWK AKKVL+YLQGTKD+MLTYKRSDHL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVDTRKST G++FLLA GA+SWKSAKQS++AASTME EF              NFISG GIVD IA+PL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVE
           KHMELKYF VKEEVQKQRVSIEHISTKLMI DPLTKG PPKTF  HVE
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVE

A0A445LQ30 Retrovirus-related Pol polyprotein from transposon TNT 1-948.1e-10876.65Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+KCS+S VPIQKGDKFSL QC KN+LER QME IPYAS+VGS++YAQTCTRPDISFA GMLGRYQSNPGM+HWK AKKVL+YLQGTKD++LTYKRSDHL
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS
        EVIGYSDSDF GCVDTRKST G++FLLA GAISWKSAKQS++AASTME  F              NFISG GIVD IA+PL++YCDNSA VFFS+NDKYS
Subjt:  EVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYS

Query:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGINR
          AKHMELKYF VKEEVQKQRVSIEHI+TKLMI DPLTKG PPKTF  +VE    NR
Subjt:  KCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGINR

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.9e-3031.73Show/hide
Query:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL
        M+ C++   P+     + L       L  ++    P  S++G L+Y   CTRPD++ A  +L RY S    + W+  K+VL+YL+GT D  L +K++   
Subjt:  MDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHL

Query:  E--VIGYSDSDFVGCVDTRKSTFGYLFLLAE-GAISWKSAKQSIIAASTMEVEFN--------------FISGFGIVDCIAKPLRIYCDNSAVVFFSRND
        E  +IGY DSD+ G    RKST GYLF + +   I W + +Q+ +AAS+ E E+                ++   I   +  P++IY DN   +  + N 
Subjt:  E--VIGYSDSDFVGCVDTRKSTFGYLFLLAE-GAISWKSAKQSIIAASTMEVEFN--------------FISGFGIVDCIAKPLRIYCDNSAVVFFSRND

Query:  KYSKCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTF
           K AKH+++KY   +E+VQ   + +E+I T+  + D  TK  P   F
Subjt:  KYSKCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDPLTKGFPPKTF

P0CV72 Secreted RxLR effector protein 1618.9e-2743.55Show/hide
Query:  METIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGA
        M+ +PY S VG+++Y    TRPD++ A G+L ++ S+P   HW+  K+VL+YLQ T+ Y L + R+   +++GYSD+D+ G V++R+ST GYLF L  G 
Subjt:  METIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGA

Query:  ISWKSAKQSIIAASTMEVEFNFIS
        +SW+S KQ  +A S+ E E+  +S
Subjt:  ISWKSAKQSIIAASTMEVEFNFIS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-3836.1Show/hide
Query:  KFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVD
        K S   C     E+  M  +PY+S VGSL+YA  CTRPDI+ A G++ R+  NPG +HW+  K +L+YL+GT    L +  SD + + GY+D+D  G +D
Subjt:  KFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVD

Query:  TRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYSKCAKHMELKYFVVKE
         RKS+ GYLF  + GAISW+S  Q  +A ST E E+               F+   G+     K   +YCD+ + +  S+N  Y    KH++++Y  ++E
Subjt:  TRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYSKCAKHMELKYFVVKE

Query:  EVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGIN
         V  + + +  IST     D LTK  P   F    E +G++
Subjt:  EVQKQRVSIEHISTKLMIVDPLTKGFPPKTFNYHVEHMGIN

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.4e-2631.22Show/hide
Query:  YASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKS
        Y  IVGSL Y    TRPDIS+A   L ++   P  +H +  K++L+YL GT ++ +  K+ + L +  YSD+D+ G  D   ST GY+  L    ISW S
Subjt:  YASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKS

Query:  AKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYSKCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDP
         KQ  +  S+ E E+              + ++  GI   + +P  IYCDN    +   N  +    KH+ + Y  ++ +VQ   + + H+ST   + D 
Subjt:  AKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYSKCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDP

Query:  LTKGFPPKTFNYHVEHMGINR
        LTK      F      +G+ R
Subjt:  LTKGFPPKTFNYHVEHMGINR

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.6e-2833.33Show/hide
Query:  YASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKS
        Y  IVGSL Y    TRPD+S+A   L +Y   P  DHW   K+VL+YL GT D+ +  K+ + L +  YSD+D+ G  D   ST GY+  L    ISW S
Subjt:  YASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKS

Query:  AKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYSKCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDP
         KQ  +  S+ E E+              + ++  GI   ++ P  IYCDN    +   N  +    KH+ L Y  ++ +VQ   + + H+ST   + D 
Subjt:  AKQSIIAASTMEVEF--------------NFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYSKCAKHMELKYFVVKEEVQKQRVSIEHISTKLMIVDP

Query:  LTKGFPPKTFNYHVEHMGI
        LTK      F      +G+
Subjt:  LTKGFPPKTFNYHVEHMGI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.0e-2330.33Show/hide
Query:  CSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVI
        C  S VP+     FS           + ++   Y  ++G L+Y Q  TR DISFA   L ++   P + H +   K+L Y++GT    L Y     +++ 
Subjt:  CSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVI

Query:  GYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEFNFISGFGIVDC-------------IAKPLRIYCDNSAVVFFSRNDKYSKCAK
         +SD+ F  C DTR+ST GY   L    ISWKS KQ +++ S+ E E+  +S F   +              ++KP  ++CDN+A +  + N  + +  K
Subjt:  GYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEFNFISGFGIVDC-------------IAKPLRIYCDNSAVVFFSRNDKYSKCAK

Query:  HMELKYFVVKE
        H+E     V+E
Subjt:  HMELKYFVVKE

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.6e-0935.44Show/hide
Query:  TCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLL
        T TRPD++FA   L ++ S       +   KVL Y++GT    L Y  +  L++  ++DSD+  C DTR+S  G+  L+
Subjt:  TCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLL

ATMG00810.1 DNA/RNA polymerases superfamily protein3.2e-1635.29Show/hide
Query:  YASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKS
        + SIVG+L Y  T TRPDIS+A  ++ +    P +  + + K+VL+Y++GT  + L   ++  L V  + DSD+ GC  TR+ST G+   L    ISW +
Subjt:  YASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSDFVGCVDTRKSTFGYLFLLAEGAISWKS

Query:  AKQSIIAASTMEVEFNFIS
         +Q  ++ S+ E E+  ++
Subjt:  AKQSIIAASTMEVEFNFIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAGAAGGGAGATAAATTTAGTCTCATGCAATGTTCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCC
TTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGCTGCAGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATC
ATTGGAAAGTTGCAAAGAAAGTTTTAAAGTATCTGCAAGGAACAAAGGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGAT
TTTGTCGGATGTGTAGATACAAGAAAATCCACTTTTGGCTATTTGTTCCTGTTAGCTGAAGGAGCAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGCTGCATCCAC
TATGGAAGTTGAATTTAACTTTATCTCAGGATTTGGAATTGTTGACTGTATTGCCAAGCCACTGAGAATTTATTGTGATAATTCTGCAGTAGTTTTCTTCTCAAGAAACG
ATAAGTATTCTAAATGTGCTAAACATATGGAATTAAAATACTTTGTCGTTAAAGAAGAAGTTCAAAAACAGAGGGTGTCAATTGAACACATTAGCACTAAACTTATGATT
GTGGATCCACTGACTAAAGGATTTCCACCAAAGACGTTCAATTATCATGTTGAACATATGGGCATCAATAGATATCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAGAAGGGAGATAAATTTAGTCTCATGCAATGTTCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCC
TTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGCTGCAGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATC
ATTGGAAAGTTGCAAAGAAAGTTTTAAAGTATCTGCAAGGAACAAAGGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGAT
TTTGTCGGATGTGTAGATACAAGAAAATCCACTTTTGGCTATTTGTTCCTGTTAGCTGAAGGAGCAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGCTGCATCCAC
TATGGAAGTTGAATTTAACTTTATCTCAGGATTTGGAATTGTTGACTGTATTGCCAAGCCACTGAGAATTTATTGTGATAATTCTGCAGTAGTTTTCTTCTCAAGAAACG
ATAAGTATTCTAAATGTGCTAAACATATGGAATTAAAATACTTTGTCGTTAAAGAAGAAGTTCAAAAACAGAGGGTGTCAATTGAACACATTAGCACTAAACTTATGATT
GTGGATCCACTGACTAAAGGATTTCCACCAAAGACGTTCAATTATCATGTTGAACATATGGGCATCAATAGATATCATCATTGA
Protein sequenceShow/hide protein sequence
MMDKCSSSVVPIQKGDKFSLMQCSKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTYKRSDHLEVIGYSDSD
FVGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEVEFNFISGFGIVDCIAKPLRIYCDNSAVVFFSRNDKYSKCAKHMELKYFVVKEEVQKQRVSIEHISTKLMI
VDPLTKGFPPKTFNYHVEHMGINRYHH