; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0107111 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0107111
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase
Genome locationCMiso1.1chr04:25504685..25505377
RNA-Seq ExpressionCmc04g0107111
SyntenyCmc04g0107111
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]9.8e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

KAA0039947.1 integrase [Cucumis melo var. makuwa]9.8e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

KAA0048003.1 integrase [Cucumis melo var. makuwa]9.8e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

KAA0060377.1 integrase [Cucumis melo var. makuwa]9.8e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

TYJ95504.1 integrase [Cucumis melo var. makuwa]9.8e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

TrEMBL top hitse value%identityAlignment
A0A5A7UDP7 Integrase4.7e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

A0A5D3CLV1 Integrase4.7e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

A0A5D3CXM6 Integrase4.7e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

A0A5D3D538 Integrase4.7e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

A0A5D3E3T2 Integrase4.7e-12696.94Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLT TRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDH+STSGYVFSMGSGVFSWTSKKQ VVALST EAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIRDLVKDGEVIVKYCKTQDQVADIFT
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-3939.57Show/hide
Query:  MENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVL
        MEN +  +TP+ +  N +L   D  +   P   RSL+G LMY +  TRPD+  AV++LSR+ +      W+  KRVLRY+ GTI+  + +KK    E+ +
Subjt:  MENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVL

Query:  FGFCDSDWGGNVDDHRSTSGYVFSM-GSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRS
         G+ DSDW G+  D +ST+GY+F M    +  W +K+Q  VA S+ EAEY++L  A  +ALWL+++L  +    +    ++ DN   I+++ NP  H R+
Subjt:  FGFCDSDWGGNVDDHRSTSGYVFSM-GSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRS

Query:  KHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFT
        KHI IKYHF R+ V++  + ++Y  T++Q+ADIFT
Subjt:  KHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFT

P0CV72 Secreted RxLR effector protein 1615.7e-2847.66Show/hide
Query:  YRSLVGSLMYL-TTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVFSWTS
        Y S VG++MYL   TRPD+  AV +LS+F ++P  +HW+A KRVLRY+  T  +G+ + +   + L G+ D+DW G+V+  RSTSGY+F +  G  SW S
Subjt:  YRSLVGSLMYL-TTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVFSWTS

Query:  KKQFVVALSTIEAEYISLAAAGCQALWL
        KKQ  VALS+ E EY++L+ A  +A+WL
Subjt:  KKQFVVALSTIEAEYISLAAAGCQALWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-4643.22Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSES
        M+NA P +TP+  +LKL K      V+         Y S VGSLMY +  TRPDI  AV ++SRF+ NP + HWEA K +LRY+ GT    + +   S+ 
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSES

Query:  VLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGR
        +L G+ D+D  G++D+ +S++GY+F+   G  SW SK Q  VALST EAEYI+    G + +WL+  L+EL   +K E V++CD+ SAI LSKN ++H R
Subjt:  VLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGR

Query:  SKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFT
        +KHI ++YH+IR++V D  + V    T +  AD+ T
Subjt:  SKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.9e-4845.41Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPDI +AV+ LS+FM  P   H +A KR+LRY+ GT N GI+ KK +   L  + D
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        +DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+ EAEY S+A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI I 
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIR+ V+ G + V +  T DQ+AD  T
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.9e-4844.54Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPD+ +AV+ LS++M  P   HW A KRVLRY+ GT + GI+ KK +   L  + D
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        +DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+ EAEY S+A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI + 
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT
        YHFIR+ V+ G + V +  T DQ+AD  T
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFT

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.7e-3941.29Show/hide
Query:  PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGG
        P + PMD ++       G+ VD   YR L+G LMYL  TR DI FAV+ LS+F   P+ +H +A  ++L YI GT+  G++Y   +E  L  F D+ +  
Subjt:  PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGG

Query:  NVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIR
          D  RST+GY   +G+ + SW SKKQ VV+ S+ EAEY +L+ A  + +WL    +EL+      T+LFCDN +AI ++ N VFH R+KHI    H +R
Subjt:  NVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIR

Query:  D
        +
Subjt:  D

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.2e-1242.31Show/hide
Query:  MYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHRSTSGY
        MYLT TRPD+ FAV+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  L  F DSDW    D  RS +G+
Subjt:  MYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHRSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein8.5e-2739.74Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ + M  P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALW
        SDW G     RST+G+   +G  + SW++K+Q  V+ S+ E EY +LA    +  W
Subjt:  SDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAG
CTTAATGTATTTGACAACAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTC
TTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCAT
AGAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATTTGTTGTTGCCCTTTCTACAATCGAAGCAGAATATATCTCGTT
AGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGTACTAAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCAT
TATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTAGAATCAAATACCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACT
CAAGATCAAGTGGCTGATATTTTTACAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAG
CTTAATGTATTTGACAACAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTC
TTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCAT
AGAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATTTGTTGTTGCCCTTTCTACAATCGAAGCAGAATATATCTCGTT
AGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGTACTAAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCAT
TATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTAGAATCAAATACCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACT
CAAGATCAAGTGGCTGATATTTTTACAGGCTGA
Protein sequenceShow/hide protein sequence
MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTTTRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDH
RSTSGYVFSMGSGVFSWTSKKQFVVALSTIEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKT
QDQVADIFTG